RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 TRMT2AQ8IZ69 625 aaKnown RBP5.92□□□□□ -1.46
CHMP4A-202ENST00000524955 JARID2Q92833 1246 aaPredicted RBP5.92□□□□□ -1.46
CHMP4A-202ENST00000524955 SGIP1Q9BQI5 828 aa5.92□□□□□ -1.46
CHMP4A-202ENST00000524955 STK31Q9BXU1 1019 aa5.92□□□□□ -1.46
CHMP4A-202ENST00000524955 CASZ1Q86V15 1759 aa5.92□□□□□ -1.46
CHMP4A-202ENST00000524955 ZBED9Q6R2W3 1325 aa5.92□□□□□ -1.46
CHMP4A-202ENST00000524955 MAP3K15Q6ZN16 1313 aa5.92□□□□□ -1.46
CHMP4A-202ENST00000524955 MYH14Q7Z406 1995 aaKnown RBP5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 A0A087WZG4 1122 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 F6X3S4 739 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 POLRMTO00411 1230 aaKnown RBP5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 NPHP1O15259 732 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 BCAR3O75815 825 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 SERPINB2P05120 415 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 POLD1P28340 1107 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 TM4SF1P30408 202 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 RIC3Q7Z5B4 369 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 SYNE4Q8N205 404 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 NLGN1Q8N2Q7 840 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 NLGN2Q8NFZ4 835 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 SLC16A10Q8TF71 515 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 SSH1Q8WYL5 1049 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 MYD88Q99836 296 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 FHDC1Q9C0D6 1143 aaPredicted RBP5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 SMC4Q9NTJ3 1288 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 TNNQ9UQP3 1299 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 NIP7Q9Y221 180 aaKnown RBP eCLIP5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 PARP3Q9Y6F1 533 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 UBR3Q6ZT12 1888 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 ZNF831Q5JPB2 1677 aa5.91□□□□□ -1.46
CHMP4A-202ENST00000524955 CICQ96RK0 1608 aaPredicted RBP5.9□□□□□ -1.46
CHMP4A-202ENST00000524955 PI4KAP2A4QPH2 592 aa5.9□□□□□ -1.46
CHMP4A-202ENST00000524955 HOXB7P09629 217 aa5.9□□□□□ -1.46
CHMP4A-202ENST00000524955 FLIIQ13045 1269 aa5.9□□□□□ -1.46
CHMP4A-202ENST00000524955 FKBP5Q13451 457 aaPredicted RBP5.9□□□□□ -1.46
CHMP4A-202ENST00000524955 SUSD4Q5VX71 490 aa5.9□□□□□ -1.46
CHMP4A-202ENST00000524955 SLC4A10Q6U841 1118 aa5.9□□□□□ -1.46
CHMP4A-202ENST00000524955 ANKRD13DQ6ZTN6 518 aa5.9□□□□□ -1.46
CHMP4A-202ENST00000524955 NUTM1Q86Y26 1132 aa5.9□□□□□ -1.46
CHMP4A-202ENST00000524955 PELP1Q8IZL8 1130 aaKnown RBP5.9□□□□□ -1.46
CHMP4A-202ENST00000524955 MRPL50Q8N5N7 158 aaKnown RBP5.9□□□□□ -1.46
CHMP4A-202ENST00000524955 PI4KAP1Q8N8J0 262 aa5.9□□□□□ -1.46
CHMP4A-202ENST00000524955 SETDB2Q96T68 719 aa5.9□□□□□ -1.46
CHMP4A-202ENST00000524955 HYPKQ9NX55 129 aa5.9□□□□□ -1.46
CHMP4A-202ENST00000524955 MAP3K2Q9Y2U5 619 aa5.9□□□□□ -1.46
CHMP4A-202ENST00000524955 UBN2Q6ZU65 1347 aa5.9□□□□□ -1.47
CHMP4A-202ENST00000524955 C4AP0C0L4 1744 aa5.9□□□□□ -1.47
CHMP4A-202ENST00000524955 CARMIL3Q8ND23 1372 aa5.9□□□□□ -1.47
CHMP4A-202ENST00000524955 LAMB4A4D0S4 1761 aa5.89□□□□□ -1.47
CHMP4A-202ENST00000524955 A0A0G2JLW4 131 aa5.89□□□□□ -1.47
CHMP4A-202ENST00000524955 CHRNA5P30532 468 aa5.89□□□□□ -1.47
CHMP4A-202ENST00000524955 RARSP54136 660 aaKnown RBP5.89□□□□□ -1.47
CHMP4A-202ENST00000524955 CWF19L2Q2TBE0 894 aaKnown RBP5.89□□□□□ -1.47
CHMP4A-202ENST00000524955 ERFEQ4G0M1 354 aa5.89□□□□□ -1.47
CHMP4A-202ENST00000524955 GIGYF2Q6Y7W6 1299 aaKnown RBP5.89□□□□□ -1.47
CHMP4A-202ENST00000524955 SLC51AQ86UW1 340 aa5.89□□□□□ -1.47
CHMP4A-202ENST00000524955 NBPF5PQ86XG9 351 aaPredicted RBP5.89□□□□□ -1.47
CHMP4A-202ENST00000524955 PLBD2Q8NHP8 589 aa5.89□□□□□ -1.47
CHMP4A-202ENST00000524955 FRAT1Q92837 279 aaPredicted RBP5.89□□□□□ -1.47
CHMP4A-202ENST00000524955 ZNF219Q9P2Y4 722 aaPredicted RBP5.89□□□□□ -1.47
CHMP4A-202ENST00000524955 NOB1Q9ULX3 412 aaKnown RBP5.89□□□□□ -1.47
CHMP4A-202ENST00000524955 ERBB4Q15303 1308 aa5.89□□□□□ -1.47
CHMP4A-202ENST00000524955 ADCY9O60503 1353 aa5.89□□□□□ -1.47
CHMP4A-202ENST00000524955 ERVV-1B6SEH8 477 aa5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 PLIN1O60240 522 aa5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 IGKV5-2P06315 115 aa5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 HCLS1P14317 486 aaPredicted RBP5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 DPEP1P16444 411 aa5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 HMGB2P26583 209 aaKnown RBP5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 GTF2E1P29083 439 aaPredicted RBP5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 TCIRG1Q13488 830 aa5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 PRR5LQ6MZQ0 368 aa5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 KSR2Q6VAB6 950 aa5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 C3orf67Q6ZVT6 689 aa5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 NLRP10Q86W26 655 aa5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 ZNF34Q8IZ26 560 aa5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 CNBD1Q8NA66 436 aa5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 CLUAP1Q96AJ1 413 aa5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 FAM89AQ96GI7 184 aa5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 CCDC85AQ96PX6 553 aaPredicted RBP5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 SYT17Q9BSW7 474 aa5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 ZNF652Q9Y2D9 606 aa5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 ABCC12Q96J65 1359 aa5.88□□□□□ -1.47
CHMP4A-202ENST00000524955 NTSR2O95665 410 aa5.87□□□□□ -1.47
CHMP4A-202ENST00000524955 DDX58O95786 925 aaKnown RBP5.87□□□□□ -1.47
CHMP4A-202ENST00000524955 DNAAF4Q8WXU2 420 aa5.87□□□□□ -1.47
CHMP4A-202ENST00000524955 ISCA1Q9BUE6 129 aa5.87□□□□□ -1.47
CHMP4A-202ENST00000524955 METTL22Q9BUU2 404 aaPredicted RBP5.87□□□□□ -1.47
CHMP4A-202ENST00000524955 TRMT112Q9UI30 125 aaKnown RBP5.87□□□□□ -1.47
CHMP4A-202ENST00000524955 SCN7AQ01118 1682 aa5.87□□□□□ -1.47
CHMP4A-202ENST00000524955 QSER1Q2KHR3 1735 aa5.86□□□□□ -1.47
CHMP4A-202ENST00000524955 NEURL1BA8MQ27 555 aa5.86□□□□□ -1.47
CHMP4A-202ENST00000524955 ST5P78524 1137 aa5.86□□□□□ -1.47
CHMP4A-202ENST00000524955 ALDH1L2Q3SY69 923 aa5.86□□□□□ -1.47
CHMP4A-202ENST00000524955 OLFM4Q6UX06 510 aa5.86□□□□□ -1.47
CHMP4A-202ENST00000524955 CLEC4GQ6UXB4 293 aa5.86□□□□□ -1.47
CHMP4A-202ENST00000524955 TPTE2Q6XPS3 522 aa5.86□□□□□ -1.47
CHMP4A-202ENST00000524955 C2CD5Q86YS7 1000 aa5.86□□□□□ -1.47
CHMP4A-202ENST00000524955 ZNF622Q969S3 477 aaKnown RBP eCLIP5.86□□□□□ -1.474e-7■■■□□ 15.2
CHMP4A-202ENST00000524955 UTP14AQ9BVJ6 771 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms