RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 BCORQ6W2J9 1755 aa17.1■□□□□ 0.33
SF3B2-203ENST00000524627 SLX4Q8IY92 1834 aa17.1■□□□□ 0.33
SF3B2-203ENST00000524627 CAPN15O75808 1086 aa17.09■□□□□ 0.33
SF3B2-203ENST00000524627 STYK1Q6J9G0 422 aa17.09■□□□□ 0.33
SF3B2-203ENST00000524627 PRPF40BQ6NWY9 871 aaKnown RBP17.09■□□□□ 0.33
SF3B2-203ENST00000524627 TNS4Q8IZW8 715 aa17.09■□□□□ 0.33
SF3B2-203ENST00000524627 USP16Q9Y5T5 823 aa17.09■□□□□ 0.33
SF3B2-203ENST00000524627 LTBP3Q9NS15 1303 aa17.09■□□□□ 0.33
SF3B2-203ENST00000524627 HSPA1AP0DMV8 641 aaKnown RBP17.08■□□□□ 0.32
SF3B2-203ENST00000524627 HSPA1BP0DMV9 641 aaKnown RBP17.08■□□□□ 0.32
SF3B2-203ENST00000524627 SRGNP10124 158 aa17.08■□□□□ 0.32
SF3B2-203ENST00000524627 MASTLQ96GX5 879 aa17.08■□□□□ 0.32
SF3B2-203ENST00000524627 RSPH6AQ9H0K4 717 aa17.08■□□□□ 0.32
SF3B2-203ENST00000524627 PRAMEF22A3QJZ6 481 aa17.07■□□□□ 0.32
SF3B2-203ENST00000524627 DDNO94850 711 aaPredicted RBP17.07■□□□□ 0.32
SF3B2-203ENST00000524627 CFAP53Q96M91 514 aa17.07■□□□□ 0.32
SF3B2-203ENST00000524627 POTEIP0CG38 1075 aa17.06■□□□□ 0.32
SF3B2-203ENST00000524627 POTEJP0CG39 1038 aa17.06■□□□□ 0.32
SF3B2-203ENST00000524627 SOGA3Q5TF21 947 aa17.06■□□□□ 0.32
SF3B2-203ENST00000524627 NBPF5PQ86XG9 351 aaPredicted RBP17.06■□□□□ 0.32
SF3B2-203ENST00000524627 ARFGEF2Q9Y6D5 1785 aa17.06■□□□□ 0.32
SF3B2-203ENST00000524627 CHADLQ6NUI6 762 aa17.05■□□□□ 0.32
SF3B2-203ENST00000524627 MCM10Q7L590 875 aa17.05■□□□□ 0.32
SF3B2-203ENST00000524627 RTF1Q92541 710 aaKnown RBP17.05■□□□□ 0.32
SF3B2-203ENST00000524627 SNRPA1P09661 255 aaKnown RBP17.04■□□□□ 0.32
SF3B2-203ENST00000524627 CLEC4GQ6UXB4 293 aa17.04■□□□□ 0.32
SF3B2-203ENST00000524627 NUDCQ9Y266 331 aa17.04■□□□□ 0.32
SF3B2-203ENST00000524627 ZNF652Q9Y2D9 606 aa17.04■□□□□ 0.32
SF3B2-203ENST00000524627 U2AF1L5P0DN76 240 aaPredicted RBP17.03■□□□□ 0.32
SF3B2-203ENST00000524627 U2AF1Q01081 240 aaKnown RBP eCLIP17.03■□□□□ 0.328e-8■□□□□ 11.2
SF3B2-203ENST00000524627 CREBZFQ9NS37 354 aa17.03■□□□□ 0.32
SF3B2-203ENST00000524627 MKRN1Q9UHC7 482 aaKnown RBP17.03■□□□□ 0.32
SF3B2-203ENST00000524627 FAM177BA6PVY3 158 aa17.02■□□□□ 0.32
SF3B2-203ENST00000524627 NPR1P16066 1061 aa17.02■□□□□ 0.32
SF3B2-203ENST00000524627 DCTN1Q14203 1278 aa17.02■□□□□ 0.32
SF3B2-203ENST00000524627 CCDC93Q567U6 631 aa17.02■□□□□ 0.32
SF3B2-203ENST00000524627 C7orf43Q8WVR3 580 aa17.02■□□□□ 0.32
SF3B2-203ENST00000524627 NIP7Q9Y221 180 aaKnown RBP eCLIP17.02■□□□□ 0.32
SF3B2-203ENST00000524627 NBPF26B4DH59 902 aa17.01■□□□□ 0.31
SF3B2-203ENST00000524627 NBPF10Q6P3W6 841 aaKnown RBP17.01■□□□□ 0.31
SF3B2-203ENST00000524627 NBPF15Q8N660 670 aa17.01■□□□□ 0.31
SF3B2-203ENST00000524627 IQCA1LA6NCM1 817 aa17■□□□□ 0.31
SF3B2-203ENST00000524627 OLFM4Q6UX06 510 aa17■□□□□ 0.31
SF3B2-203ENST00000524627 TPTE2Q6XPS3 522 aa17■□□□□ 0.31
SF3B2-203ENST00000524627 ZNF277Q9NRM2 450 aaPredicted RBP17■□□□□ 0.31
SF3B2-203ENST00000524627 KLRG2A4D1S0 409 aaPredicted RBP16.99■□□□□ 0.31
SF3B2-203ENST00000524627 FKBP4Q02790 459 aaKnown RBP eCLIP16.99■□□□□ 0.31
SF3B2-203ENST00000524627 LDHDQ86WU2 507 aa16.99■□□□□ 0.31
SF3B2-203ENST00000524627 L3MBTL3Q96JM7 780 aaPredicted RBP16.99■□□□□ 0.31
SF3B2-203ENST00000524627 TAF1DQ9H5J8 278 aaPredicted RBP16.99■□□□□ 0.31
SF3B2-203ENST00000524627 ZNF541Q9H0D2 1346 aa16.98■□□□□ 0.31
SF3B2-203ENST00000524627 SCN4AP35499 1836 aa16.98■□□□□ 0.31
SF3B2-203ENST00000524627 PPP2R1AP30153 589 aa16.98■□□□□ 0.31
SF3B2-203ENST00000524627 HLFQ16534 295 aa16.98■□□□□ 0.31
SF3B2-203ENST00000524627 GTF2E1P29083 439 aaPredicted RBP16.97■□□□□ 0.31
SF3B2-203ENST00000524627 EAPPQ56P03 285 aaPredicted RBP16.97■□□□□ 0.31
SF3B2-203ENST00000524627 RTKN2Q8IZC4 609 aa16.97■□□□□ 0.31
SF3B2-203ENST00000524627 MIS18AQ9NYP9 233 aa16.97■□□□□ 0.31
SF3B2-203ENST00000524627 PASKQ96RG2 1323 aa16.96■□□□□ 0.31
SF3B2-203ENST00000524627 RGL2O15211 777 aa16.96■□□□□ 0.31
SF3B2-203ENST00000524627 HTATSF1O43719 755 aaKnown RBP16.96■□□□□ 0.31
SF3B2-203ENST00000524627 TAF7Q15545 349 aaPredicted RBP16.96■□□□□ 0.31
SF3B2-203ENST00000524627 CNTNAP1P78357 1384 aa16.96■□□□□ 0.31
SF3B2-203ENST00000524627 ALDH1B1P30837 517 aa16.95■□□□□ 0.3
SF3B2-203ENST00000524627 NGEFQ8N5V2 710 aa16.95■□□□□ 0.3
SF3B2-203ENST00000524627 HACL1Q9UJ83 578 aa16.95■□□□□ 0.3
SF3B2-203ENST00000524627 IARSP41252 1262 aaKnown RBP16.94■□□□□ 0.3
SF3B2-203ENST00000524627 SYNE4Q8N205 404 aa16.94■□□□□ 0.3
SF3B2-203ENST00000524627 CLEC11AQ9Y240 323 aa16.94■□□□□ 0.3
SF3B2-203ENST00000524627 LAMB4A4D0S4 1761 aa16.94■□□□□ 0.3
SF3B2-203ENST00000524627 RNF123Q5XPI4 1314 aa16.94■□□□□ 0.3
SF3B2-203ENST00000524627 ABCC12Q96J65 1359 aa16.93■□□□□ 0.3
SF3B2-203ENST00000524627 TMEM88BA6NKF7 163 aa16.93■□□□□ 0.3
SF3B2-203ENST00000524627 EPHX2P34913 555 aa16.93■□□□□ 0.3
SF3B2-203ENST00000524627 NUTM1Q86Y26 1132 aa16.93■□□□□ 0.3
SF3B2-203ENST00000524627 FZD9O00144 591 aa16.92■□□□□ 0.3
SF3B2-203ENST00000524627 FOXN1O15353 648 aa16.92■□□□□ 0.3
SF3B2-203ENST00000524627 ITGBL1O95965 494 aaPredicted RBP16.92■□□□□ 0.3
SF3B2-203ENST00000524627 NYXQ9GZU5 481 aa16.92■□□□□ 0.3
SF3B2-203ENST00000524627 VEGFBP49765 207 aa16.91■□□□□ 0.3
SF3B2-203ENST00000524627 CRY2Q49AN0 593 aa16.91■□□□□ 0.3
SF3B2-203ENST00000524627 RRP7AQ9Y3A4 280 aaKnown RBP16.91■□□□□ 0.3
SF3B2-203ENST00000524627 ADAMTSL1Q8N6G6 1762 aa16.9■□□□□ 0.3
SF3B2-203ENST00000524627 ERVV-1B6SEH8 477 aa16.9■□□□□ 0.3
SF3B2-203ENST00000524627 NEFMP07197 916 aa16.9■□□□□ 0.3
SF3B2-203ENST00000524627 MAP1SQ66K74 1059 aaPredicted RBP16.9■□□□□ 0.3
SF3B2-203ENST00000524627 KIF6Q6ZMV9 814 aa16.9■□□□□ 0.3
SF3B2-203ENST00000524627 TTLL7Q6ZT98 887 aa16.9■□□□□ 0.3
SF3B2-203ENST00000524627 PNMA8AQ86V59 439 aaPredicted RBP16.9■□□□□ 0.3
SF3B2-203ENST00000524627 JDP2Q8WYK2 163 aa16.9■□□□□ 0.3
SF3B2-203ENST00000524627 AIDAQ96BJ3 306 aa16.9■□□□□ 0.3
SF3B2-203ENST00000524627 PSMD1Q99460 953 aa16.9■□□□□ 0.3
SF3B2-203ENST00000524627 NUP98P52948 1817 aa16.9■□□□□ 0.3
SF3B2-203ENST00000524627 MAP3K15Q6ZN16 1313 aa16.9■□□□□ 0.3
SF3B2-203ENST00000524627 DLG5Q8TDM6 1919 aa16.9■□□□□ 0.3
SF3B2-203ENST00000524627 KDM3BQ7LBC6 1761 aa16.89■□□□□ 0.3
SF3B2-203ENST00000524627 SNED1Q8TER0 1413 aa16.89■□□□□ 0.29
SF3B2-203ENST00000524627 MYL6BP14649 208 aa16.89■□□□□ 0.29
SF3B2-203ENST00000524627 GPTP24298 496 aa16.89■□□□□ 0.29
SF3B2-203ENST00000524627 CNTROBQ8N137 903 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms