RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 USHBP1Q8N6Y0 703 aa10.02□□□□□ -0.81
CHD7-202ENST00000524602 PI4KAP1Q8N8J0 262 aa10.02□□□□□ -0.81
CHD7-202ENST00000524602 SNX14Q9Y5W7 946 aa10.02□□□□□ -0.81
CHD7-202ENST00000524602 C1orf167Q5SNV9 1468 aa10.02□□□□□ -0.81
CHD7-202ENST00000524602 SYCE3A1L190 88 aa10.01□□□□□ -0.81
CHD7-202ENST00000524602 BTBD11A6QL63 1104 aa10.01□□□□□ -0.81
CHD7-202ENST00000524602 ZNF500O60304 480 aaPredicted RBP10.01□□□□□ -0.81
CHD7-202ENST00000524602 EIF2S2P20042 333 aaKnown RBP10.01□□□□□ -0.81
CHD7-202ENST00000524602 RBM10P98175 930 aaKnown RBP10.01□□□□□ -0.81
CHD7-202ENST00000524602 UPF3BQ9BZI7 483 aaKnown RBP10.01□□□□□ -0.81
CHD7-202ENST00000524602 HEG1Q9ULI3 1381 aa10.01□□□□□ -0.81
CHD7-202ENST00000524602 KIF1AQ12756 1690 aa10.01□□□□□ -0.81
CHD7-202ENST00000524602 OFD1O75665 1012 aa10.01□□□□□ -0.81
CHD7-202ENST00000524602 PDIA4P13667 645 aaKnown RBP10.01□□□□□ -0.81
CHD7-202ENST00000524602 C19orf44Q9H6X5 657 aa10.01□□□□□ -0.81
CHD7-202ENST00000524602 LIMCH1Q9UPQ0 1083 aa10.01□□□□□ -0.81
CHD7-202ENST00000524602 ATP6V1DQ9Y5K8 247 aa10.01□□□□□ -0.81
CHD7-202ENST00000524602 CLASRPQ8N2M8 674 aaKnown RBP10.01□□□□□ -0.81
CHD7-202ENST00000524602 FAM184AQ8NB25 1140 aa10.01□□□□□ -0.81
CHD7-202ENST00000524602 IL25Q9H293 177 aa10.01□□□□□ -0.81
CHD7-202ENST00000524602 TSPY26PQ9H489 355 aa10.01□□□□□ -0.81
CHD7-202ENST00000524602 LGR6Q9HBX8 967 aa10.01□□□□□ -0.81
CHD7-202ENST00000524602 CCDC39Q9UFE4 941 aa10.01□□□□□ -0.81
CHD7-202ENST00000524602 RPAP1Q9BWH6 1393 aaPredicted RBP10□□□□□ -0.81
CHD7-202ENST00000524602 LETM1O95202 739 aaPredicted RBP10□□□□□ -0.81
CHD7-202ENST00000524602 HSPA2P54652 639 aa10□□□□□ -0.81
CHD7-202ENST00000524602 LMOD2Q6P5Q4 547 aa10□□□□□ -0.81
CHD7-202ENST00000524602 ZNF530Q6P9A1 599 aaPredicted RBP10□□□□□ -0.81
CHD7-202ENST00000524602 TM6SF1Q9BZW5 370 aa10□□□□□ -0.81
CHD7-202ENST00000524602 KCNB2Q92953 911 aa10□□□□□ -0.81
CHD7-202ENST00000524602 NSFL1CQ9UNZ2 370 aaKnown RBP10□□□□□ -0.81
CHD7-202ENST00000524602 TMEM94Q12767 1356 aa10□□□□□ -0.81
CHD7-202ENST00000524602 HIP1O00291 1037 aa9.99□□□□□ -0.81
CHD7-202ENST00000524602 RRP9O43818 475 aaKnown RBP9.99□□□□□ -0.81
CHD7-202ENST00000524602 C1orf141Q5JVX7 400 aa9.99□□□□□ -0.81
CHD7-202ENST00000524602 ZSCAN31Q96LW9 406 aaPredicted RBP9.99□□□□□ -0.81
CHD7-202ENST00000524602 DIAPH3Q9NSV4 1193 aa9.99□□□□□ -0.81
CHD7-202ENST00000524602 ECHDC1Q9NTX5 307 aa9.99□□□□□ -0.81
CHD7-202ENST00000524602 RNMTO43148 476 aaKnown RBP9.99□□□□□ -0.81
CHD7-202ENST00000524602 OS9Q13438 667 aaPredicted RBP9.99□□□□□ -0.81
CHD7-202ENST00000524602 CSPP1Q1MSJ5 1256 aa9.99□□□□□ -0.81
CHD7-202ENST00000524602 UVSSAQ2YD98 709 aa9.99□□□□□ -0.81
CHD7-202ENST00000524602 KSR2Q6VAB6 950 aa9.99□□□□□ -0.81
CHD7-202ENST00000524602 HYPKQ9NX55 129 aa9.99□□□□□ -0.81
CHD7-202ENST00000524602 UTYO14607 1347 aa9.99□□□□□ -0.81
CHD7-202ENST00000524602 GCP02774 474 aa9.99□□□□□ -0.81
CHD7-202ENST00000524602 ZSCAN22P10073 491 aaPredicted RBP9.99□□□□□ -0.81
CHD7-202ENST00000524602 VPS53Q5VIR6 699 aa9.99□□□□□ -0.81
CHD7-202ENST00000524602 FOXD4L5Q5VV16 416 aaPredicted RBP9.99□□□□□ -0.81
CHD7-202ENST00000524602 NOL8Q76FK4 1167 aaKnown RBP9.99□□□□□ -0.81
CHD7-202ENST00000524602 KRT28Q7Z3Y7 464 aa9.99□□□□□ -0.81
CHD7-202ENST00000524602 FOXD4L4Q8WXT5 416 aaPredicted RBP9.99□□□□□ -0.81
CHD7-202ENST00000524602 EVI5LQ96CN4 794 aa9.99□□□□□ -0.81
CHD7-202ENST00000524602 SH2B1Q9NRF2 756 aaPredicted RBP9.99□□□□□ -0.81
CHD7-202ENST00000524602 ZKSCAN5Q9Y2L8 839 aa9.99□□□□□ -0.81
CHD7-202ENST00000524602 AK2P54819 239 aa9.98□□□□□ -0.81
CHD7-202ENST00000524602 GIGYF1O75420 1035 aaPredicted RBP9.98□□□□□ -0.81
CHD7-202ENST00000524602 MST1RQ04912 1400 aa9.98□□□□□ -0.81
CHD7-202ENST00000524602 USP48Q86UV5 1035 aa9.98□□□□□ -0.81
CHD7-202ENST00000524602 C9orf78Q9NZ63 289 aaPredicted RBP9.98□□□□□ -0.81
CHD7-202ENST00000524602 CWC27Q6UX04 472 aaKnown RBP9.98□□□□□ -0.81
CHD7-202ENST00000524602 ALS2Q96Q42 1657 aa9.98□□□□□ -0.81
CHD7-202ENST00000524602 RGPD5Q99666 1765 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 STX6O43752 255 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 DDX58O95786 925 aaKnown RBP9.97□□□□□ -0.81
CHD7-202ENST00000524602 MAP4K4O95819 1239 aaPredicted RBP9.97□□□□□ -0.81
CHD7-202ENST00000524602 IFIT2P09913 472 aaKnown RBP9.97□□□□□ -0.81
CHD7-202ENST00000524602 ATF3P18847 181 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 CCDC183Q5T5S1 534 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 RUFY3Q7L099 469 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 LRRC59Q96AG4 307 aaKnown RBP9.97□□□□□ -0.81
CHD7-202ENST00000524602 SNRKQ9NRH2 765 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 SMC3Q9UQE7 1217 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 MAP3K2Q9Y2U5 619 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 PXDNQ92626 1479 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 TCHHQ07283 1943 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 UBE2HP62256 183 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 ARHGEF25Q86VW2 580 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 RASEFQ8IZ41 740 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 LINS1Q8NG48 757 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 CHAMP1Q96JM3 812 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 KCNQ3O43525 872 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 DDX17Q92841 729 aaKnown RBP9.97□□□□□ -0.81
CHD7-202ENST00000524602 ZSWIM6Q9HCJ5 1215 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 PLEKHG2Q9H7P9 1386 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 MRC1P22897 1456 aa9.97□□□□□ -0.81
CHD7-202ENST00000524602 ABCC6O95255 1503 aa9.96□□□□□ -0.81
CHD7-202ENST00000524602 F13A1P00488 732 aa9.96□□□□□ -0.81
CHD7-202ENST00000524602 CASTP20810 708 aaKnown RBP9.96□□□□□ -0.81
CHD7-202ENST00000524602 MPRIPQ6WCQ1 1025 aa9.96□□□□□ -0.81
CHD7-202ENST00000524602 CYP46A1Q9Y6A2 500 aa9.96□□□□□ -0.81
CHD7-202ENST00000524602 ZKSCAN1P17029 563 aaPredicted RBP9.96□□□□□ -0.82
CHD7-202ENST00000524602 SYT1P21579 422 aa9.96□□□□□ -0.82
CHD7-202ENST00000524602 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.96□□□□□ -0.82
CHD7-202ENST00000524602 DCCP43146 1447 aa9.96□□□□□ -0.82
CHD7-202ENST00000524602 XIRP1Q702N8 1843 aaKnown RBP9.96□□□□□ -0.82
CHD7-202ENST00000524602 PDRG1Q9NUG6 133 aa9.95□□□□□ -0.82
CHD7-202ENST00000524602 GRM8O00222 908 aa9.95□□□□□ -0.82
CHD7-202ENST00000524602 DDX21Q9NR30 783 aaKnown RBP eCLIP9.95□□□□□ -0.82
CHD7-202ENST00000524602 SPG7Q9UQ90 795 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms