RNA–Protein interactions for RNA: ENST00000524432.5

MACF1-227, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 4,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-227ENST00000524432 CCDC112Q8NEF3 446 aa20.58■□□□□ 0.88
MACF1-227ENST00000524432 CTNNA3Q9UI47 895 aa20.58■□□□□ 0.88
MACF1-227ENST00000524432 PRDM15P57071 1507 aaPredicted RBP20.58■□□□□ 0.88
MACF1-227ENST00000524432 MTERF4Q7Z6M4 381 aaKnown RBP20.57■□□□□ 0.88
MACF1-227ENST00000524432 GPTP24298 496 aa20.57■□□□□ 0.88
MACF1-227ENST00000524432 CEP57L1Q8IYX8 460 aa20.57■□□□□ 0.88
MACF1-227ENST00000524432 TTC12Q9H892 705 aaPredicted RBP20.57■□□□□ 0.88
MACF1-227ENST00000524432 IMMTQ16891 758 aaKnown RBP20.57■□□□□ 0.88
MACF1-227ENST00000524432 RBSNQ9H1K0 784 aa20.57■□□□□ 0.88
MACF1-227ENST00000524432 NEK1Q96PY6 1258 aa20.57■□□□□ 0.88
MACF1-227ENST00000524432 NFATC2IPQ8NCF5 419 aa20.56■□□□□ 0.88
MACF1-227ENST00000524432 KLHDC4Q8TBB5 520 aa20.56■□□□□ 0.88
MACF1-227ENST00000524432 CABLES1Q8TDN4 633 aa20.56■□□□□ 0.88
MACF1-227ENST00000524432 EDC4Q6P2E9 1401 aaKnown RBP20.56■□□□□ 0.88
MACF1-227ENST00000524432 USP19O94966 1318 aa20.56■□□□□ 0.88
MACF1-227ENST00000524432 KDM5AP29375 1690 aaKnown RBP20.55■□□□□ 0.88
MACF1-227ENST00000524432 ABCC4O15439 1325 aa20.55■□□□□ 0.88
MACF1-227ENST00000524432 NMIQ13287 307 aaPredicted RBP20.54■□□□□ 0.88
MACF1-227ENST00000524432 IFNL2Q8IZJ0 200 aa20.54■□□□□ 0.88
MACF1-227ENST00000524432 ANKRD20A12PQ8NF67 263 aa20.54■□□□□ 0.88
MACF1-227ENST00000524432 PIBF1Q8WXW3 757 aa20.54■□□□□ 0.88
MACF1-227ENST00000524432 ZNF165P49910 485 aa20.54■□□□□ 0.88
MACF1-227ENST00000524432 LMBR1LQ6UX01 489 aa20.54■□□□□ 0.88
MACF1-227ENST00000524432 JMYQ8N9B5 988 aa20.54■□□□□ 0.88
MACF1-227ENST00000524432 ABCF2Q9UG63 623 aa20.54■□□□□ 0.88
MACF1-227ENST00000524432 NCBP3Q53F19 620 aaKnown RBP20.54■□□□□ 0.88
MACF1-227ENST00000524432 BIN1O00499 593 aa20.54■□□□□ 0.88
MACF1-227ENST00000524432 POLR3DP05423 398 aaPredicted RBP20.54■□□□□ 0.88
MACF1-227ENST00000524432 SYT1P21579 422 aa20.54■□□□□ 0.88
MACF1-227ENST00000524432 AKAP4Q5JQC9 854 aa20.54■□□□□ 0.88
MACF1-227ENST00000524432 FAM173BQ6P4H8 233 aa20.54■□□□□ 0.88
MACF1-227ENST00000524432 SIRT2Q8IXJ6 389 aa20.53■□□□□ 0.88
MACF1-227ENST00000524432 LINS1Q8NG48 757 aa20.53■□□□□ 0.88
MACF1-227ENST00000524432 C16orf45Q96MC5 204 aaPredicted RBP20.53■□□□□ 0.88
MACF1-227ENST00000524432 NOL10Q9BSC4 688 aaKnown RBP20.53■□□□□ 0.88
MACF1-227ENST00000524432 F13A1P00488 732 aa20.53■□□□□ 0.88
MACF1-227ENST00000524432 TDO2P48775 406 aa20.53■□□□□ 0.88
MACF1-227ENST00000524432 GAS2L3Q86XJ1 694 aa20.53■□□□□ 0.88
MACF1-227ENST00000524432 ANTXR1Q9H6X2 564 aa20.53■□□□□ 0.88
MACF1-227ENST00000524432 XBP1P17861 261 aa20.52■□□□□ 0.88
MACF1-227ENST00000524432 PDE4CQ08493 712 aa20.52■□□□□ 0.88
MACF1-227ENST00000524432 C8orf76Q96K31 380 aa20.52■□□□□ 0.88
MACF1-227ENST00000524432 YEATS2Q9ULM3 1422 aa20.52■□□□□ 0.88
MACF1-227ENST00000524432 MYO5CQ9NQX4 1742 aa20.52■□□□□ 0.88
MACF1-227ENST00000524432 CDC42BPAQ5VT25 1732 aa20.52■□□□□ 0.88
MACF1-227ENST00000524432 CCDC69A6NI79 296 aa20.52■□□□□ 0.88
MACF1-227ENST00000524432 GCP02774 474 aa20.52■□□□□ 0.88
MACF1-227ENST00000524432 TRIM22Q8IYM9 498 aa20.52■□□□□ 0.88
MACF1-227ENST00000524432 ISM2Q6H9L7 571 aa20.52■□□□□ 0.88
MACF1-227ENST00000524432 TRMT1Q9NXH9 659 aaKnown RBP20.52■□□□□ 0.88
MACF1-227ENST00000524432 MAP3K5Q99683 1374 aa20.52■□□□□ 0.87
MACF1-227ENST00000524432 IPO7O95373 1038 aaKnown RBP20.52■□□□□ 0.87
MACF1-227ENST00000524432 SNRPA1P09661 255 aaKnown RBP20.52■□□□□ 0.87
MACF1-227ENST00000524432 GOLGA6L1Q8N7Z2 621 aa20.52■□□□□ 0.87
MACF1-227ENST00000524432 TMX4Q9H1E5 349 aaPredicted RBP20.52■□□□□ 0.87
MACF1-227ENST00000524432 DACT1Q9NYF0 836 aa20.52■□□□□ 0.87
MACF1-227ENST00000524432 AIDAQ96BJ3 306 aa20.51■□□□□ 0.87
MACF1-227ENST00000524432 IFIT5Q13325 482 aaKnown RBP20.51■□□□□ 0.87
MACF1-227ENST00000524432 CHST3Q7LGC8 479 aa20.51■□□□□ 0.87
MACF1-227ENST00000524432 AMOTL1Q8IY63 956 aa20.51■□□□□ 0.87
MACF1-227ENST00000524432 FSIP1Q8NA03 581 aa20.51■□□□□ 0.87
MACF1-227ENST00000524432 ALDH1L1O75891 902 aa20.5■□□□□ 0.87
MACF1-227ENST00000524432 CCDC144CPQ8IYA2 1237 aa20.5■□□□□ 0.87
MACF1-227ENST00000524432 LRP2BPQ9P2M1 347 aa20.5■□□□□ 0.87
MACF1-227ENST00000524432 PALD1Q9ULE6 856 aa20.5■□□□□ 0.87
MACF1-227ENST00000524432 ERCC6L2Q5T890 1561 aa20.5■□□□□ 0.87
MACF1-227ENST00000524432 TRPM2O94759 1503 aa20.5■□□□□ 0.87
MACF1-227ENST00000524432 PDIA4P13667 645 aaKnown RBP20.5■□□□□ 0.87
MACF1-227ENST00000524432 CLIP2Q9UDT6 1046 aa20.5■□□□□ 0.87
MACF1-227ENST00000524432 LTKP29376 864 aa20.5■□□□□ 0.87
MACF1-227ENST00000524432 NACAP1Q9BZK3 213 aa20.5■□□□□ 0.87
MACF1-227ENST00000524432 SYNMO15061 1565 aa20.49■□□□□ 0.87
MACF1-227ENST00000524432 LRRIQ1Q96JM4 1722 aa20.49■□□□□ 0.87
MACF1-227ENST00000524432 USP44Q9H0E7 712 aa20.49■□□□□ 0.87
MACF1-227ENST00000524432 RTL1A6NKG5 1358 aa20.49■□□□□ 0.87
MACF1-227ENST00000524432 A0A0U1RQG5 324 aaPredicted RBP20.49■□□□□ 0.87
MACF1-227ENST00000524432 IL17REQ8NFR9 667 aa20.49■□□□□ 0.87
MACF1-227ENST00000524432 BICC1Q9H694 974 aaKnown RBP20.49■□□□□ 0.87
MACF1-227ENST00000524432 PRDM10Q9NQV6 1147 aa20.49■□□□□ 0.87
MACF1-227ENST00000524432 LMBRD1Q9NUN5 540 aa20.49■□□□□ 0.87
MACF1-227ENST00000524432 ZKSCAN5Q9Y2L8 839 aa20.49■□□□□ 0.87
MACF1-227ENST00000524432 KCNQ3O43525 872 aa20.49■□□□□ 0.87
MACF1-227ENST00000524432 TNNT3P45378 269 aaPredicted RBP20.49■□□□□ 0.87
MACF1-227ENST00000524432 CREB3L3Q68CJ9 461 aa20.49■□□□□ 0.87
MACF1-227ENST00000524432 NDUFB9Q9Y6M9 179 aa20.49■□□□□ 0.87
MACF1-227ENST00000524432 GOLGA8BA8MQT2 603 aa20.48■□□□□ 0.87
MACF1-227ENST00000524432 BRMS1Q9HCU9 246 aa20.48■□□□□ 0.87
MACF1-227ENST00000524432 TMOD3Q9NYL9 352 aa20.48■□□□□ 0.87
MACF1-227ENST00000524432 ZNF213O14771 459 aa20.48■□□□□ 0.87
MACF1-227ENST00000524432 LDHAL6AQ6ZMR3 332 aa20.48■□□□□ 0.87
MACF1-227ENST00000524432 INTS4Q96HW7 963 aaKnown RBP20.48■□□□□ 0.87
MACF1-227ENST00000524432 CFAP100Q494V2 611 aa20.48■□□□□ 0.87
MACF1-227ENST00000524432 BICDL1Q6ZP65 573 aa20.48■□□□□ 0.87
MACF1-227ENST00000524432 NOC3LQ8WTT2 800 aaKnown RBP20.48■□□□□ 0.87
MACF1-227ENST00000524432 STARD3NLO95772 234 aa20.47■□□□□ 0.87
MACF1-227ENST00000524432 ZSCAN25Q6NSZ9 544 aa20.47■□□□□ 0.87
MACF1-227ENST00000524432 DDX19AQ9NUU7 478 aaKnown RBP20.47■□□□□ 0.87
MACF1-227ENST00000524432 MINDY4BA8MYZ0 360 aa20.47■□□□□ 0.87
MACF1-227ENST00000524432 NBPF6Q5VWK0 638 aa20.47■□□□□ 0.87
MACF1-227ENST00000524432 NBPF4Q96M43 638 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms