RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 BECN1Q14457 450 aa9.88□□□□□ -0.83
SPIDR-223ENST00000524033 MAMSTRQ6ZN01 415 aa9.88□□□□□ -0.83
SPIDR-223ENST00000524033 GPIHBP1Q8IV16 184 aa9.88□□□□□ -0.83
SPIDR-223ENST00000524033 PDZRN3Q9UPQ7 1066 aa9.88□□□□□ -0.83
SPIDR-223ENST00000524033 KCNQ4P56696 695 aa9.87□□□□□ -0.83
SPIDR-223ENST00000524033 ZNF827Q17R98 1081 aa9.87□□□□□ -0.83
SPIDR-223ENST00000524033 RBM26Q5T8P6 1007 aaKnown RBP9.87□□□□□ -0.83
SPIDR-223ENST00000524033 MORC1Q86VD1 984 aa9.87□□□□□ -0.83
SPIDR-223ENST00000524033 FAM43AQ8N2R8 423 aa9.87□□□□□ -0.83
SPIDR-223ENST00000524033 SLAIN1Q8ND83 568 aa9.87□□□□□ -0.83
SPIDR-223ENST00000524033 TFCP2L1Q9NZI6 479 aa9.87□□□□□ -0.83
SPIDR-223ENST00000524033 EMILIN1Q9Y6C2 1016 aa9.87□□□□□ -0.83
SPIDR-223ENST00000524033 YY1P25490 414 aa9.86□□□□□ -0.83
SPIDR-223ENST00000524033 MVPQ14764 893 aaKnown RBP9.86□□□□□ -0.83
SPIDR-223ENST00000524033 ZC3H15Q8WU90 426 aaKnown RBP9.86□□□□□ -0.83
SPIDR-223ENST00000524033 DDX12PQ92771 950 aa9.86□□□□□ -0.83
SPIDR-223ENST00000524033 RREB1Q92766 1687 aa9.86□□□□□ -0.83
SPIDR-223ENST00000524033 FLT4P35916 1363 aa9.86□□□□□ -0.83
SPIDR-223ENST00000524033 KIF24Q5T7B8 1368 aa9.86□□□□□ -0.83
SPIDR-223ENST00000524033 NUP188Q5SRE5 1749 aa9.85□□□□□ -0.83
SPIDR-223ENST00000524033 TNNT2P45379 298 aaPredicted RBP9.85□□□□□ -0.83
SPIDR-223ENST00000524033 ARXQ96QS3 562 aa9.85□□□□□ -0.83
SPIDR-223ENST00000524033 SYT17Q9BSW7 474 aa9.85□□□□□ -0.83
SPIDR-223ENST00000524033 FHDC1Q9C0D6 1143 aaPredicted RBP9.85□□□□□ -0.83
SPIDR-223ENST00000524033 IL16Q14005 1332 aa9.84□□□□□ -0.83
SPIDR-223ENST00000524033 USP54Q70EL1 1684 aa9.84□□□□□ -0.83
SPIDR-223ENST00000524033 RGPD5Q99666 1765 aa9.84□□□□□ -0.83
SPIDR-223ENST00000524033 RIMBP2O15034 1052 aa9.84□□□□□ -0.83
SPIDR-223ENST00000524033 HDAC1Q13547 482 aaPredicted RBP9.84□□□□□ -0.83
SPIDR-223ENST00000524033 MPRIPQ6WCQ1 1025 aa9.84□□□□□ -0.83
SPIDR-223ENST00000524033 SLC16A10Q8TF71 515 aa9.84□□□□□ -0.83
SPIDR-223ENST00000524033 PTCD2Q8WV60 388 aaKnown RBP9.84□□□□□ -0.83
SPIDR-223ENST00000524033 TBC1D2Q9BYX2 928 aa9.84□□□□□ -0.83
SPIDR-223ENST00000524033 RWDD1Q9H446 243 aaPredicted RBP9.84□□□□□ -0.83
SPIDR-223ENST00000524033 MYH16Q9H6N6 1097 aa9.84□□□□□ -0.83
SPIDR-223ENST00000524033 POLKQ9UBT6 870 aa9.84□□□□□ -0.83
SPIDR-223ENST00000524033 CCNL1Q9UK58 526 aaPredicted RBP9.84□□□□□ -0.83
SPIDR-223ENST00000524033 PCDH11XQ9BZA7 1347 aa9.83□□□□□ -0.84
SPIDR-223ENST00000524033 PCDH11YQ9BZA8 1340 aa9.83□□□□□ -0.84
SPIDR-223ENST00000524033 MEGF6O75095 1541 aa9.83□□□□□ -0.84
SPIDR-223ENST00000524033 FSD2A1L4K1 749 aa9.83□□□□□ -0.84
SPIDR-223ENST00000524033 CYP27B1O15528 508 aa9.83□□□□□ -0.84
SPIDR-223ENST00000524033 HMGB2P26583 209 aaKnown RBP9.83□□□□□ -0.84
SPIDR-223ENST00000524033 CANXP27824 592 aaKnown RBP9.83□□□□□ -0.84
SPIDR-223ENST00000524033 MTHFSP49914 203 aa9.83□□□□□ -0.84
SPIDR-223ENST00000524033 CFAP53Q96M91 514 aa9.83□□□□□ -0.84
SPIDR-223ENST00000524033 PLEKHF1Q96S99 279 aa9.83□□□□□ -0.84
SPIDR-223ENST00000524033 SPG7Q9UQ90 795 aa9.83□□□□□ -0.84
SPIDR-223ENST00000524033 RRP7AQ9Y3A4 280 aaKnown RBP9.83□□□□□ -0.84
SPIDR-223ENST00000524033 SLC34A2O95436 690 aa9.82□□□□□ -0.84
SPIDR-223ENST00000524033 POLD1P28340 1107 aa9.82□□□□□ -0.84
SPIDR-223ENST00000524033 DOK7Q18PE1 504 aa9.82□□□□□ -0.84
SPIDR-223ENST00000524033 ZKSCAN2Q63HK3 967 aa9.82□□□□□ -0.84
SPIDR-223ENST00000524033 KRI1Q8N9T8 703 aaKnown RBP9.82□□□□□ -0.84
SPIDR-223ENST00000524033 EYA1Q99502 592 aa9.82□□□□□ -0.84
SPIDR-223ENST00000524033 PNPLA7Q6ZV29 1317 aa9.82□□□□□ -0.84
SPIDR-223ENST00000524033 DDIT3P35638 169 aa9.81□□□□□ -0.84
SPIDR-223ENST00000524033 L1TD1Q5T7N2 865 aaKnown RBP9.81□□□□□ -0.84
SPIDR-223ENST00000524033 SMC5Q8IY18 1101 aa9.81□□□□□ -0.84
SPIDR-223ENST00000524033 ZNF710Q8N1W2 664 aa9.81□□□□□ -0.84
SPIDR-223ENST00000524033 DLG5Q8TDM6 1919 aa9.81□□□□□ -0.84
SPIDR-223ENST00000524033 RGPD3A6NKT7 1758 aaPredicted RBP9.8□□□□□ -0.84
SPIDR-223ENST00000524033 LTN1O94822 1766 aa9.8□□□□□ -0.84
SPIDR-223ENST00000524033 RGPD4Q7Z3J3 1758 aa9.8□□□□□ -0.84
SPIDR-223ENST00000524033 DZIP1LQ8IYY4 767 aaKnown RBP9.8□□□□□ -0.84
SPIDR-223ENST00000524033 PIGBQ92521 554 aa9.8□□□□□ -0.84
SPIDR-223ENST00000524033 SMARCC1Q92922 1105 aaPredicted RBP9.8□□□□□ -0.84
SPIDR-223ENST00000524033 PCDHGA4Q9Y5G9 962 aa9.8□□□□□ -0.84
SPIDR-223ENST00000524033 NHSQ6T4R5 1651 aa9.8□□□□□ -0.84
SPIDR-223ENST00000524033 SBF2Q86WG5 1849 aa9.79□□□□□ -0.84
SPIDR-223ENST00000524033 POTEB2H3BUK9 544 aa9.79□□□□□ -0.84
SPIDR-223ENST00000524033 MCM4P33991 863 aa9.79□□□□□ -0.84
SPIDR-223ENST00000524033 BRPF1P55201 1214 aaPredicted RBP9.79□□□□□ -0.84
SPIDR-223ENST00000524033 EIF4A2Q14240 407 aaKnown RBP9.79□□□□□ -0.84
SPIDR-223ENST00000524033 COL23A1Q86Y22 540 aaPredicted RBP9.79□□□□□ -0.84
SPIDR-223ENST00000524033 UPF2Q9HAU5 1272 aaKnown RBP9.79□□□□□ -0.84
SPIDR-223ENST00000524033 MAP2P11137 1827 aaKnown RBP9.78□□□□□ -0.84
SPIDR-223ENST00000524033 WNK3Q9BYP7 1800 aa9.78□□□□□ -0.84
SPIDR-223ENST00000524033 TRIM27P14373 513 aa9.78□□□□□ -0.84
SPIDR-223ENST00000524033 TMPOP42166 694 aaKnown RBP9.78□□□□□ -0.84
SPIDR-223ENST00000524033 GPR162Q16538 588 aa9.78□□□□□ -0.84
SPIDR-223ENST00000524033 IFNL2Q8IZJ0 200 aa9.78□□□□□ -0.84
SPIDR-223ENST00000524033 FLAD1Q8NFF5 587 aa9.78□□□□□ -0.84
SPIDR-223ENST00000524033 BCL2L13Q9BXK5 485 aa9.78□□□□□ -0.84
SPIDR-223ENST00000524033 SLKQ9H2G2 1235 aaPredicted RBP9.78□□□□□ -0.84
SPIDR-223ENST00000524033 TMOD3Q9NYL9 352 aa9.78□□□□□ -0.84
SPIDR-223ENST00000524033 CHMP5Q9NZZ3 219 aa9.78□□□□□ -0.84
SPIDR-223ENST00000524033 DDX19BQ9UMR2 479 aa9.78□□□□□ -0.84
SPIDR-223ENST00000524033 PALLDQ8WX93 1383 aa9.77□□□□□ -0.84
SPIDR-223ENST00000524033 POTEJP0CG39 1038 aa9.77□□□□□ -0.85
SPIDR-223ENST00000524033 PHKG2P15735 406 aa9.77□□□□□ -0.85
SPIDR-223ENST00000524033 RBM25P49756 843 aaKnown RBP9.77□□□□□ -0.85
SPIDR-223ENST00000524033 NEUROD2Q15784 382 aa9.77□□□□□ -0.85
SPIDR-223ENST00000524033 SNX21Q969T3 373 aa9.77□□□□□ -0.85
SPIDR-223ENST00000524033 SLC24A3Q9HC58 644 aa9.77□□□□□ -0.85
SPIDR-223ENST00000524033 RRAGDQ9NQL2 400 aaPredicted RBP9.77□□□□□ -0.85
SPIDR-223ENST00000524033 KIF16BQ96L93 1317 aa9.77□□□□□ -0.85
SPIDR-223ENST00000524033 CASZ1Q86V15 1759 aa9.76□□□□□ -0.85
SPIDR-223ENST00000524033 EXOSC9Q06265 439 aaKnown RBP9.76□□□□□ -0.85
SPIDR-223ENST00000524033 ALDH1L2Q3SY69 923 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms