RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 MRC1P22897 1456 aa12.7□□□□□ -0.38
PTPN12-216ENST00000523952 LTBP3Q9NS15 1303 aa12.69□□□□□ -0.38
PTPN12-216ENST00000523952 ST5P78524 1137 aa12.69□□□□□ -0.38
PTPN12-216ENST00000523952 CCDC24Q8N4L8 307 aa12.69□□□□□ -0.38
PTPN12-216ENST00000523952 ABHD8Q96I13 439 aa12.69□□□□□ -0.38
PTPN12-216ENST00000523952 BEGAINQ9BUH8 593 aa12.69□□□□□ -0.38
PTPN12-216ENST00000523952 BCL2L12Q9HB09 334 aa12.69□□□□□ -0.38
PTPN12-216ENST00000523952 CASP8AP2Q9UKL3 1982 aa12.69□□□□□ -0.38
PTPN12-216ENST00000523952 PASKQ96RG2 1323 aa12.68□□□□□ -0.38
PTPN12-216ENST00000523952 MAP2K1Q02750 393 aaPredicted RBP12.68□□□□□ -0.38
PTPN12-216ENST00000523952 DEFB115Q30KQ5 88 aa12.68□□□□□ -0.38
PTPN12-216ENST00000523952 TBC1D9BQ66K14 1250 aa12.68□□□□□ -0.38
PTPN12-216ENST00000523952 PAXIP1Q6ZW49 1069 aaPredicted RBP12.68□□□□□ -0.38
PTPN12-216ENST00000523952 VSIG10Q8N0Z9 540 aa12.68□□□□□ -0.38
PTPN12-216ENST00000523952 CNBD1Q8NA66 436 aa12.68□□□□□ -0.38
PTPN12-216ENST00000523952 LGR6Q9HBX8 967 aa12.68□□□□□ -0.38
PTPN12-216ENST00000523952 ABT1Q9ULW3 272 aaKnown RBP12.68□□□□□ -0.38
PTPN12-216ENST00000523952 ADAMTSL1Q8N6G6 1762 aa12.68□□□□□ -0.38
PTPN12-216ENST00000523952 CCDC85CA6NKD9 419 aa12.67□□□□□ -0.38
PTPN12-216ENST00000523952 RNMTO43148 476 aaKnown RBP12.67□□□□□ -0.38
PTPN12-216ENST00000523952 MLLT1Q03111 559 aaPredicted RBP12.67□□□□□ -0.38
PTPN12-216ENST00000523952 PRR5LQ6MZQ0 368 aa12.67□□□□□ -0.38
PTPN12-216ENST00000523952 PRPF40BQ6NWY9 871 aaKnown RBP12.67□□□□□ -0.38
PTPN12-216ENST00000523952 SETDB2Q96T68 719 aa12.67□□□□□ -0.38
PTPN12-216ENST00000523952 TAF1DQ9H5J8 278 aaPredicted RBP12.67□□□□□ -0.38
PTPN12-216ENST00000523952 WBP1LQ9NX94 342 aa12.67□□□□□ -0.38
PTPN12-216ENST00000523952 STYK1Q6J9G0 422 aa12.66□□□□□ -0.38
PTPN12-216ENST00000523952 CFAP44Q96MT7 982 aa12.66□□□□□ -0.38
PTPN12-216ENST00000523952 HACL1Q9UJ83 578 aa12.66□□□□□ -0.38
PTPN12-216ENST00000523952 HSPA8P11142 646 aaKnown RBP12.65□□□□□ -0.38
PTPN12-216ENST00000523952 PNMA8AQ86V59 439 aaPredicted RBP12.65□□□□□ -0.38
PTPN12-216ENST00000523952 MASTLQ96GX5 879 aa12.65□□□□□ -0.38
PTPN12-216ENST00000523952 TBC1D2BQ9UPU7 963 aa12.65□□□□□ -0.38
PTPN12-216ENST00000523952 WDR33Q9C0J8 1336 aaKnown RBP12.64□□□□□ -0.39
PTPN12-216ENST00000523952 THSD7BQ9C0I4 1608 aa12.64□□□□□ -0.39
PTPN12-216ENST00000523952 EPHX2P34913 555 aa12.64□□□□□ -0.39
PTPN12-216ENST00000523952 EIF5P55010 431 aaKnown RBP12.64□□□□□ -0.39
PTPN12-216ENST00000523952 GRM1Q13255 1194 aa12.64□□□□□ -0.39
PTPN12-216ENST00000523952 CCDC93Q567U6 631 aa12.64□□□□□ -0.39
PTPN12-216ENST00000523952 L3MBTL3Q96JM7 780 aaPredicted RBP12.64□□□□□ -0.39
PTPN12-216ENST00000523952 TEX13AQ9BXU3 409 aaPredicted RBP12.64□□□□□ -0.39
PTPN12-216ENST00000523952 PANK3Q9H999 370 aa12.64□□□□□ -0.39
PTPN12-216ENST00000523952 RASSF10A6NK89 507 aa12.63□□□□□ -0.39
PTPN12-216ENST00000523952 ITGBL1O95965 494 aaPredicted RBP12.63□□□□□ -0.39
PTPN12-216ENST00000523952 HMOX1P09601 288 aa12.63□□□□□ -0.39
PTPN12-216ENST00000523952 CNTROBQ8N137 903 aa12.63□□□□□ -0.39
PTPN12-216ENST00000523952 PCDH10Q9P2E7 1040 aa12.63□□□□□ -0.39
PTPN12-216ENST00000523952 NUP98P52948 1817 aa12.62□□□□□ -0.39
PTPN12-216ENST00000523952 AKAP11Q9UKA4 1901 aa12.62□□□□□ -0.39
PTPN12-216ENST00000523952 SRGNP10124 158 aa12.62□□□□□ -0.39
PTPN12-216ENST00000523952 IL13P35225 146 aa12.62□□□□□ -0.39
PTPN12-216ENST00000523952 TEFQ10587 303 aa12.62□□□□□ -0.39
PTPN12-216ENST00000523952 MAP1SQ66K74 1059 aaPredicted RBP12.62□□□□□ -0.39
PTPN12-216ENST00000523952 RNF123Q5XPI4 1314 aa12.62□□□□□ -0.39
PTPN12-216ENST00000523952 LMOD1P29536 600 aaPredicted RBP12.61□□□□□ -0.39
PTPN12-216ENST00000523952 IL6STP40189 918 aaPredicted RBP12.61□□□□□ -0.39
PTPN12-216ENST00000523952 ECE1P42892 770 aa12.61□□□□□ -0.39
PTPN12-216ENST00000523952 FKBP4Q02790 459 aaKnown RBP eCLIP12.61□□□□□ -0.39
PTPN12-216ENST00000523952 NBPF5PQ86XG9 351 aaPredicted RBP12.61□□□□□ -0.39
PTPN12-216ENST00000523952 PIP4P2Q8N4L2 257 aa12.61□□□□□ -0.39
PTPN12-216ENST00000523952 ZNF277Q9NRM2 450 aaPredicted RBP12.61□□□□□ -0.39
PTPN12-216ENST00000523952 KNSTRNQ9Y448 316 aa12.61□□□□□ -0.39
PTPN12-216ENST00000523952 ZNF541Q9H0D2 1346 aa12.61□□□□□ -0.39
PTPN12-216ENST00000523952 HEG1Q9ULI3 1381 aa12.6□□□□□ -0.39
PTPN12-216ENST00000523952 NPR1P16066 1061 aa12.6□□□□□ -0.39
PTPN12-216ENST00000523952 RTKN2Q8IZC4 609 aa12.6□□□□□ -0.39
PTPN12-216ENST00000523952 JDP2Q8WYK2 163 aa12.6□□□□□ -0.39
PTPN12-216ENST00000523952 ZNF652Q9Y2D9 606 aa12.6□□□□□ -0.39
PTPN12-216ENST00000523952 PDE4DIPQ5VU43 2346 aa12.59□□□□□ -0.39
PTPN12-216ENST00000523952 MYCNP04198 464 aaPredicted RBP12.59□□□□□ -0.39
PTPN12-216ENST00000523952 MTHFSDQ2M296 383 aaKnown RBP12.59□□□□□ -0.39
PTPN12-216ENST00000523952 DZIP3Q86Y13 1208 aaKnown RBP12.59□□□□□ -0.39
PTPN12-216ENST00000523952 ZNF496Q96IT1 587 aaPredicted RBP12.59□□□□□ -0.39
PTPN12-216ENST00000523952 CAPNS2Q96L46 248 aa12.59□□□□□ -0.39
PTPN12-216ENST00000523952 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
PTPN12-216ENST00000523952 GJA3Q9Y6H8 435 aa12.59□□□□□ -0.39
PTPN12-216ENST00000523952 GTF2E1P29083 439 aaPredicted RBP12.58□□□□□ -0.4
PTPN12-216ENST00000523952 IARSP41252 1262 aaKnown RBP12.58□□□□□ -0.4
PTPN12-216ENST00000523952 EIF6P56537 245 aaKnown RBP12.58□□□□□ -0.4
PTPN12-216ENST00000523952 ZNF790Q6PG37 636 aa12.58□□□□□ -0.4
PTPN12-216ENST00000523952 GPC2Q8N158 579 aa12.58□□□□□ -0.4
PTPN12-216ENST00000523952 GPR101Q96P66 508 aaPredicted RBP12.58□□□□□ -0.4
PTPN12-216ENST00000523952 DDX21Q9NR30 783 aaKnown RBP eCLIP12.58□□□□□ -0.4
PTPN12-216ENST00000523952 LAMB4A4D0S4 1761 aa12.57□□□□□ -0.4
PTPN12-216ENST00000523952 CAMTA2O94983 1202 aa12.57□□□□□ -0.4
PTPN12-216ENST00000523952 A1BGP04217 495 aa12.57□□□□□ -0.4
PTPN12-216ENST00000523952 ALDH1B1P30837 517 aa12.57□□□□□ -0.4
PTPN12-216ENST00000523952 SYNE4Q8N205 404 aa12.57□□□□□ -0.4
PTPN12-216ENST00000523952 POLR2AP24928 1970 aaKnown RBP12.57□□□□□ -0.4
PTPN12-216ENST00000523952 LTBP1Q14766 1721 aa12.57□□□□□ -0.4
PTPN12-216ENST00000523952 FAM177BA6PVY3 158 aa12.56□□□□□ -0.4
PTPN12-216ENST00000523952 GNAT3A8MTJ3 354 aa12.56□□□□□ -0.4
PTPN12-216ENST00000523952 DIAPH1O60610 1272 aaKnown RBP12.56□□□□□ -0.4
PTPN12-216ENST00000523952 CYP4F22Q6NT55 531 aa12.56□□□□□ -0.4
PTPN12-216ENST00000523952 TPTE2Q6XPS3 522 aa12.56□□□□□ -0.4
PTPN12-216ENST00000523952 HAX1O00165 279 aa12.55□□□□□ -0.4
PTPN12-216ENST00000523952 RGS19P49795 217 aa12.55□□□□□ -0.4
PTPN12-216ENST00000523952 EIF4G2P78344 907 aaKnown RBP eCLIP12.55□□□□□ -0.4
PTPN12-216ENST00000523952 TSKSQ9UJT2 592 aa12.55□□□□□ -0.4
PTPN12-216ENST00000523952 TNRC18O15417 2968 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms