RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 MYBBP1AQ9BQG0 1328 aaKnown RBP11.67□□□□□ -0.54
CTNNA1-240ENST00000523912 PLEKHF1Q96S99 279 aa11.67□□□□□ -0.54
CTNNA1-240ENST00000523912 PRAMEF22A3QJZ6 481 aa11.66□□□□□ -0.54
CTNNA1-240ENST00000523912 PIP4K2AP48426 406 aaPredicted RBP11.66□□□□□ -0.54
CTNNA1-240ENST00000523912 SOGA3Q5TF21 947 aa11.66□□□□□ -0.54
CTNNA1-240ENST00000523912 KIF6Q6ZMV9 814 aa11.66□□□□□ -0.54
CTNNA1-240ENST00000523912 CNKSR1Q969H4 720 aa11.66□□□□□ -0.54
CTNNA1-240ENST00000523912 DLEC1Q9Y238 1755 aa11.66□□□□□ -0.54
CTNNA1-240ENST00000523912 AFDNP55196 1824 aaKnown RBP11.65□□□□□ -0.54
CTNNA1-240ENST00000523912 RASSF7Q02833 373 aa11.65□□□□□ -0.54
CTNNA1-240ENST00000523912 DDX10Q13206 875 aaKnown RBP11.65□□□□□ -0.54
CTNNA1-240ENST00000523912 WDR43Q15061 677 aaKnown RBP eCLIP11.65□□□□□ -0.54
CTNNA1-240ENST00000523912 STYK1Q6J9G0 422 aa11.65□□□□□ -0.54
CTNNA1-240ENST00000523912 DPY19L2Q6NUT2 758 aa11.65□□□□□ -0.54
CTNNA1-240ENST00000523912 TPTE2Q6XPS3 522 aa11.65□□□□□ -0.54
CTNNA1-240ENST00000523912 MIS18AQ9NYP9 233 aa11.65□□□□□ -0.54
CTNNA1-240ENST00000523912 TSPYL4Q9UJ04 414 aa11.65□□□□□ -0.54
CTNNA1-240ENST00000523912 NIP7Q9Y221 180 aaKnown RBP eCLIP11.65□□□□□ -0.54
CTNNA1-240ENST00000523912 NBPF26B4DH59 902 aa11.64□□□□□ -0.55
CTNNA1-240ENST00000523912 GTF2E1P29083 439 aaPredicted RBP11.64□□□□□ -0.55
CTNNA1-240ENST00000523912 RIPK4P57078 832 aa11.64□□□□□ -0.55
CTNNA1-240ENST00000523912 NBPF10Q6P3W6 841 aaKnown RBP11.64□□□□□ -0.55
CTNNA1-240ENST00000523912 NBPF15Q8N660 670 aa11.64□□□□□ -0.55
CTNNA1-240ENST00000523912 MASTLQ96GX5 879 aa11.64□□□□□ -0.55
CTNNA1-240ENST00000523912 THUMPD2Q9BTF0 503 aaKnown RBP11.64□□□□□ -0.55
CTNNA1-240ENST00000523912 ERBB4Q15303 1308 aa11.63□□□□□ -0.55
CTNNA1-240ENST00000523912 LTBP3Q9NS15 1303 aa11.63□□□□□ -0.55
CTNNA1-240ENST00000523912 NFKBIEO00221 500 aa11.63□□□□□ -0.55
CTNNA1-240ENST00000523912 PRELPP51888 382 aa11.63□□□□□ -0.55
CTNNA1-240ENST00000523912 EIF4A1P60842 406 aaKnown RBP11.63□□□□□ -0.55
CTNNA1-240ENST00000523912 HTRA3P83110 453 aa11.63□□□□□ -0.55
CTNNA1-240ENST00000523912 COL13A1Q5TAT6 717 aaPredicted RBP11.63□□□□□ -0.55
CTNNA1-240ENST00000523912 CCDC24Q8N4L8 307 aa11.63□□□□□ -0.55
CTNNA1-240ENST00000523912 NYXQ9GZU5 481 aa11.63□□□□□ -0.55
CTNNA1-240ENST00000523912 TAOK3Q9H2K8 898 aa11.63□□□□□ -0.55
CTNNA1-240ENST00000523912 BABAM1Q9NWV8 329 aa11.63□□□□□ -0.55
CTNNA1-240ENST00000523912 BCORQ6W2J9 1755 aa11.62□□□□□ -0.55
CTNNA1-240ENST00000523912 ERVV-1B6SEH8 477 aa11.62□□□□□ -0.55
CTNNA1-240ENST00000523912 C21orf2O43822 256 aa11.62□□□□□ -0.55
CTNNA1-240ENST00000523912 SRGNP10124 158 aa11.62□□□□□ -0.55
CTNNA1-240ENST00000523912 NPR1P16066 1061 aa11.62□□□□□ -0.55
CTNNA1-240ENST00000523912 PRPF40BQ6NWY9 871 aaKnown RBP11.62□□□□□ -0.55
CTNNA1-240ENST00000523912 ZNF219Q9P2Y4 722 aaPredicted RBP11.62□□□□□ -0.55
CTNNA1-240ENST00000523912 MAP3K15Q6ZN16 1313 aa11.61□□□□□ -0.55
CTNNA1-240ENST00000523912 POTECB2RU33 542 aa11.61□□□□□ -0.55
CTNNA1-240ENST00000523912 TMPOP42166 694 aaKnown RBP11.61□□□□□ -0.55
CTNNA1-240ENST00000523912 TNS4Q8IZW8 715 aa11.61□□□□□ -0.55
CTNNA1-240ENST00000523912 NGEFQ8N5V2 710 aa11.61□□□□□ -0.55
CTNNA1-240ENST00000523912 RRP7AQ9Y3A4 280 aaKnown RBP11.61□□□□□ -0.55
CTNNA1-240ENST00000523912 LAMB4A4D0S4 1761 aa11.61□□□□□ -0.55
CTNNA1-240ENST00000523912 FAM177BA6PVY3 158 aa11.6□□□□□ -0.55
CTNNA1-240ENST00000523912 MYL6BP14649 208 aa11.6□□□□□ -0.55
CTNNA1-240ENST00000523912 ERFEQ4G0M1 354 aa11.6□□□□□ -0.55
CTNNA1-240ENST00000523912 CCDC93Q567U6 631 aa11.6□□□□□ -0.55
CTNNA1-240ENST00000523912 RUNDC1Q96C34 613 aa11.6□□□□□ -0.55
CTNNA1-240ENST00000523912 KDM3BQ7LBC6 1761 aa11.59□□□□□ -0.55
CTNNA1-240ENST00000523912 IBTKQ9P2D0 1353 aaPredicted RBP11.59□□□□□ -0.55
CTNNA1-240ENST00000523912 DICER1Q9UPY3 1922 aaKnown RBP11.59□□□□□ -0.55
CTNNA1-240ENST00000523912 HLFQ16534 295 aa11.59□□□□□ -0.55
CTNNA1-240ENST00000523912 CCDC146Q8IYE0 955 aa11.59□□□□□ -0.55
CTNNA1-240ENST00000523912 CREBZFQ9NS37 354 aa11.59□□□□□ -0.55
CTNNA1-240ENST00000523912 TIAM2Q8IVF5 1701 aa11.58□□□□□ -0.56
CTNNA1-240ENST00000523912 FER1L6Q2WGJ9 1857 aa11.58□□□□□ -0.56
CTNNA1-240ENST00000523912 CCDC88AQ3V6T2 1871 aa11.58□□□□□ -0.56
CTNNA1-240ENST00000523912 HSPA1AP0DMV8 641 aaKnown RBP11.58□□□□□ -0.56
CTNNA1-240ENST00000523912 HSPA1BP0DMV9 641 aaKnown RBP11.58□□□□□ -0.56
CTNNA1-240ENST00000523912 ALDH1B1P30837 517 aa11.58□□□□□ -0.56
CTNNA1-240ENST00000523912 NEUROD2Q15784 382 aa11.58□□□□□ -0.56
CTNNA1-240ENST00000523912 PARP10Q53GL7 1025 aa11.58□□□□□ -0.56
CTNNA1-240ENST00000523912 CHADLQ6NUI6 762 aa11.58□□□□□ -0.56
CTNNA1-240ENST00000523912 ZBTB3Q9H5J0 574 aa11.58□□□□□ -0.56
CTNNA1-240ENST00000523912 COL11A2P13942 1736 aaPredicted RBP11.57□□□□□ -0.56
CTNNA1-240ENST00000523912 ANKRD31Q8N7Z5 1873 aa11.57□□□□□ -0.56
CTNNA1-240ENST00000523912 KLRG2A4D1S0 409 aaPredicted RBP11.57□□□□□ -0.56
CTNNA1-240ENST00000523912 IQCA1LA6NCM1 817 aa11.57□□□□□ -0.56
CTNNA1-240ENST00000523912 EIF2S2P20042 333 aaKnown RBP11.57□□□□□ -0.56
CTNNA1-240ENST00000523912 GPTP24298 496 aa11.57□□□□□ -0.56
CTNNA1-240ENST00000523912 TTLL7Q6ZT98 887 aa11.57□□□□□ -0.56
CTNNA1-240ENST00000523912 RTKN2Q8IZC4 609 aa11.57□□□□□ -0.56
CTNNA1-240ENST00000523912 RPGRQ92834 1020 aaKnown RBP11.57□□□□□ -0.56
CTNNA1-240ENST00000523912 L3MBTL3Q96JM7 780 aaPredicted RBP11.57□□□□□ -0.56
CTNNA1-240ENST00000523912 DLG5Q8TDM6 1919 aa11.56□□□□□ -0.56
CTNNA1-240ENST00000523912 CALD1Q05682 793 aaKnown RBP11.56□□□□□ -0.56
CTNNA1-240ENST00000523912 HSP90AB3PQ58FF7 597 aa11.56□□□□□ -0.56
CTNNA1-240ENST00000523912 GIGYF2Q6Y7W6 1299 aaKnown RBP11.56□□□□□ -0.56
CTNNA1-240ENST00000523912 PPP1R42Q7Z4L9 355 aa11.56□□□□□ -0.56
CTNNA1-240ENST00000523912 TMX4Q9H1E5 349 aaPredicted RBP11.56□□□□□ -0.56
CTNNA1-240ENST00000523912 PRKRIP1Q9H875 184 aaPredicted RBP11.56□□□□□ -0.56
CTNNA1-240ENST00000523912 LAS1LQ9Y4W2 734 aaKnown RBP11.56□□□□□ -0.56
CTNNA1-240ENST00000523912 ABCC12Q96J65 1359 aa11.55□□□□□ -0.56
CTNNA1-240ENST00000523912 RIC1Q4ADV7 1423 aa11.55□□□□□ -0.56
CTNNA1-240ENST00000523912 FKBP4Q02790 459 aaKnown RBP eCLIP11.55□□□□□ -0.56
CTNNA1-240ENST00000523912 CRY2Q49AN0 593 aa11.55□□□□□ -0.56
CTNNA1-240ENST00000523912 CC2D2BQ6DHV5 1058 aa11.55□□□□□ -0.56
CTNNA1-240ENST00000523912 NUTM1Q86Y26 1132 aa11.55□□□□□ -0.56
CTNNA1-240ENST00000523912 C7orf43Q8WVR3 580 aa11.55□□□□□ -0.56
CTNNA1-240ENST00000523912 RNF123Q5XPI4 1314 aa11.55□□□□□ -0.56
CTNNA1-240ENST00000523912 CHL1O00533 1208 aa11.54□□□□□ -0.56
CTNNA1-240ENST00000523912 HOXB7P09629 217 aa11.54□□□□□ -0.56
CTNNA1-240ENST00000523912 ZEB1P37275 1124 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms