RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 A1BGP04217 495 aa15.79■□□□□ 0.12
SDCBP-211ENST00000523441 HSPA5P11021 654 aaKnown RBP15.79■□□□□ 0.12
SDCBP-211ENST00000523441 MAP1SQ66K74 1059 aaPredicted RBP15.79■□□□□ 0.12
SDCBP-211ENST00000523441 VSIG10Q8N0Z9 540 aa15.79■□□□□ 0.12
SDCBP-211ENST00000523441 ABHD8Q96I13 439 aa15.79■□□□□ 0.12
SDCBP-211ENST00000523441 ABT1Q9ULW3 272 aaKnown RBP15.79■□□□□ 0.12
SDCBP-211ENST00000523441 CCDC85CA6NKD9 419 aa15.78■□□□□ 0.12
SDCBP-211ENST00000523441 TEFQ10587 303 aa15.78■□□□□ 0.12
SDCBP-211ENST00000523441 CFAP44Q96MT7 982 aa15.78■□□□□ 0.12
SDCBP-211ENST00000523441 RNF123Q5XPI4 1314 aa15.77■□□□□ 0.12
SDCBP-211ENST00000523441 LTBP3Q9NS15 1303 aa15.77■□□□□ 0.12
SDCBP-211ENST00000523441 SRGNP10124 158 aa15.77■□□□□ 0.12
SDCBP-211ENST00000523441 DEFB115Q30KQ5 88 aa15.77■□□□□ 0.12
SDCBP-211ENST00000523441 STYK1Q6J9G0 422 aa15.77■□□□□ 0.12
SDCBP-211ENST00000523441 MASTLQ96GX5 879 aa15.77■□□□□ 0.12
SDCBP-211ENST00000523441 WBP1LQ9NX94 342 aa15.77■□□□□ 0.12
SDCBP-211ENST00000523441 HACL1Q9UJ83 578 aa15.77■□□□□ 0.12
SDCBP-211ENST00000523441 PDZRN3Q9UPQ7 1066 aa15.77■□□□□ 0.12
SDCBP-211ENST00000523441 BCORQ6W2J9 1755 aa15.77■□□□□ 0.11
SDCBP-211ENST00000523441 HEG1Q9ULI3 1381 aa15.76■□□□□ 0.11
SDCBP-211ENST00000523441 ITGBL1O95965 494 aaPredicted RBP15.76■□□□□ 0.11
SDCBP-211ENST00000523441 HSPA8P11142 646 aaKnown RBP15.76■□□□□ 0.11
SDCBP-211ENST00000523441 EPHX2P34913 555 aa15.76■□□□□ 0.11
SDCBP-211ENST00000523441 CCDC93Q567U6 631 aa15.76■□□□□ 0.11
SDCBP-211ENST00000523441 CAMTA2O94983 1202 aa15.75■□□□□ 0.11
SDCBP-211ENST00000523441 EIF4G2P78344 907 aaKnown RBP eCLIP15.75■□□□□ 0.11
SDCBP-211ENST00000523441 SOGA3Q5TF21 947 aa15.75■□□□□ 0.11
SDCBP-211ENST00000523441 NBPF5PQ86XG9 351 aaPredicted RBP15.75■□□□□ 0.11
SDCBP-211ENST00000523441 DZIP3Q86Y13 1208 aaKnown RBP15.75■□□□□ 0.11
SDCBP-211ENST00000523441 CNTROBQ8N137 903 aa15.75■□□□□ 0.11
SDCBP-211ENST00000523441 TSKSQ9UJT2 592 aa15.75■□□□□ 0.11
SDCBP-211ENST00000523441 GJA3Q9Y6H8 435 aa15.75■□□□□ 0.11
SDCBP-211ENST00000523441 WDR33Q9C0J8 1336 aaKnown RBP15.74■□□□□ 0.11
SDCBP-211ENST00000523441 U2SURPO15042 1029 aaKnown RBP15.74■□□□□ 0.11
SDCBP-211ENST00000523441 SLC34A2O95436 690 aa15.74■□□□□ 0.11
SDCBP-211ENST00000523441 IL6STP40189 918 aaPredicted RBP15.74■□□□□ 0.11
SDCBP-211ENST00000523441 FMR1Q06787 632 aaKnown RBP eCLIP15.74■□□□□ 0.11
SDCBP-211ENST00000523441 ZNF790Q6PG37 636 aa15.74■□□□□ 0.11
SDCBP-211ENST00000523441 SIPA1L3O60292 1781 aaPredicted RBP15.74■□□□□ 0.11
SDCBP-211ENST00000523441 KCNQ3O43525 872 aa15.73■□□□□ 0.11
SDCBP-211ENST00000523441 DIAPH1O60610 1272 aaKnown RBP15.73■□□□□ 0.11
SDCBP-211ENST00000523441 FKBP4Q02790 459 aaKnown RBP eCLIP15.73■□□□□ 0.11
SDCBP-211ENST00000523441 L3MBTL3Q96JM7 780 aaPredicted RBP15.73■□□□□ 0.11
SDCBP-211ENST00000523441 CC2D1BQ5T0F9 858 aaKnown RBP15.72■□□□□ 0.11
SDCBP-211ENST00000523441 IL17REQ8NFR9 667 aa15.72■□□□□ 0.11
SDCBP-211ENST00000523441 FMNL2Q96PY5 1086 aa15.72■□□□□ 0.11
SDCBP-211ENST00000523441 TEX13AQ9BXU3 409 aaPredicted RBP15.72■□□□□ 0.11
SDCBP-211ENST00000523441 ADAMTSL1Q8N6G6 1762 aa15.72■□□□□ 0.11
SDCBP-211ENST00000523441 PRAMEF22A3QJZ6 481 aa15.71■□□□□ 0.11
SDCBP-211ENST00000523441 NPR1P16066 1061 aa15.71■□□□□ 0.11
SDCBP-211ENST00000523441 SYNE4Q8N205 404 aa15.71■□□□□ 0.11
SDCBP-211ENST00000523441 BEGAINQ9BUH8 593 aa15.71■□□□□ 0.11
SDCBP-211ENST00000523441 PCGF6Q9BYE7 350 aa15.71■□□□□ 0.11
SDCBP-211ENST00000523441 RASSF10A6NK89 507 aa15.7■□□□□ 0.1
SDCBP-211ENST00000523441 GNAT3A8MTJ3 354 aa15.7■□□□□ 0.1
SDCBP-211ENST00000523441 TCERG1O14776 1098 aaKnown RBP15.7■□□□□ 0.1
SDCBP-211ENST00000523441 IARSP41252 1262 aaKnown RBP15.7■□□□□ 0.1
SDCBP-211ENST00000523441 MAP2K1Q02750 393 aaPredicted RBP15.7■□□□□ 0.1
SDCBP-211ENST00000523441 MLLT1Q03111 559 aaPredicted RBP15.7■□□□□ 0.1
SDCBP-211ENST00000523441 CYP4F22Q6NT55 531 aa15.7■□□□□ 0.1
SDCBP-211ENST00000523441 BTBD11A6QL63 1104 aa15.69■□□□□ 0.1
SDCBP-211ENST00000523441 GTF2E1P29083 439 aaPredicted RBP15.69■□□□□ 0.1
SDCBP-211ENST00000523441 PNMA8AQ86V59 439 aaPredicted RBP15.69■□□□□ 0.1
SDCBP-211ENST00000523441 PIAS4Q8N2W9 510 aaPredicted RBP15.69■□□□□ 0.1
SDCBP-211ENST00000523441 C7orf43Q8WVR3 580 aa15.69■□□□□ 0.1
SDCBP-211ENST00000523441 NIP7Q9Y221 180 aaKnown RBP eCLIP15.69■□□□□ 0.1
SDCBP-211ENST00000523441 USP16Q9Y5T5 823 aa15.69■□□□□ 0.1
SDCBP-211ENST00000523441 CAPNS2Q96L46 248 aa15.68■□□□□ 0.1
SDCBP-211ENST00000523441 DDX21Q9NR30 783 aaKnown RBP eCLIP15.68■□□□□ 0.1
SDCBP-211ENST00000523441 TRAF5O00463 557 aa15.67■□□□□ 0.1
SDCBP-211ENST00000523441 AOC2O75106 756 aa15.67■□□□□ 0.1
SDCBP-211ENST00000523441 LMOD1P29536 600 aaPredicted RBP15.67■□□□□ 0.1
SDCBP-211ENST00000523441 AMER1Q5JTC6 1135 aaPredicted RBP15.67■□□□□ 0.1
SDCBP-211ENST00000523441 RTKN2Q8IZC4 609 aa15.67■□□□□ 0.1
SDCBP-211ENST00000523441 NGEFQ8N5V2 710 aa15.67■□□□□ 0.1
SDCBP-211ENST00000523441 JDP2Q8WYK2 163 aa15.67■□□□□ 0.1
SDCBP-211ENST00000523441 ZNF652Q9Y2D9 606 aa15.67■□□□□ 0.1
SDCBP-211ENST00000523441 LTBP1Q14766 1721 aa15.67■□□□□ 0.1
SDCBP-211ENST00000523441 TRPM7Q96QT4 1865 aa15.67■□□□□ 0.1
SDCBP-211ENST00000523441 EIF6P56537 245 aaKnown RBP15.66■□□□□ 0.1
SDCBP-211ENST00000523441 TPTE2Q6XPS3 522 aa15.66■□□□□ 0.1
SDCBP-211ENST00000523441 GAS2L2Q8NHY3 880 aa15.66■□□□□ 0.1
SDCBP-211ENST00000523441 GPR101Q96P66 508 aaPredicted RBP15.66■□□□□ 0.1
SDCBP-211ENST00000523441 CASP8AP2Q9UKL3 1982 aa15.66■□□□□ 0.1
SDCBP-211ENST00000523441 EPS15P42566 896 aa15.65■□□□□ 0.1
SDCBP-211ENST00000523441 SLC51AQ86UW1 340 aa15.65■□□□□ 0.1
SDCBP-211ENST00000523441 GPC2Q8N158 579 aa15.65■□□□□ 0.1
SDCBP-211ENST00000523441 COL4A5P29400 1685 aa15.64■□□□□ 0.09
SDCBP-211ENST00000523441 FZD9O00144 591 aa15.64■□□□□ 0.09
SDCBP-211ENST00000523441 NUTM1Q86Y26 1132 aa15.64■□□□□ 0.09
SDCBP-211ENST00000523441 ALDH1B1P30837 517 aa15.63■□□□□ 0.09
SDCBP-211ENST00000523441 ECE1P42892 770 aa15.63■□□□□ 0.09
SDCBP-211ENST00000523441 HLFQ16534 295 aa15.63■□□□□ 0.09
SDCBP-211ENST00000523441 LARGE2Q8N3Y3 721 aa15.63■□□□□ 0.09
SDCBP-211ENST00000523441 ZNF408Q9H9D4 720 aa15.63■□□□□ 0.09
SDCBP-211ENST00000523441 MCM10Q7L590 875 aa15.62■□□□□ 0.09
SDCBP-211ENST00000523441 PHACTR3Q96KR7 559 aa15.62■□□□□ 0.09
SDCBP-211ENST00000523441 TIMELESSQ9UNS1 1208 aa15.62■□□□□ 0.09
SDCBP-211ENST00000523441 THSD7BQ9C0I4 1608 aa15.61■□□□□ 0.09
SDCBP-211ENST00000523441 PRKAR2BP31323 418 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms