RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 NAPBQ9H115 298 aa15.46■□□□□ 0.07
PCDHGB1-201ENST00000523390 DDX21Q9NR30 783 aaKnown RBP eCLIP15.46■□□□□ 0.07
PCDHGB1-201ENST00000523390 TPM1P09493 284 aa15.46■□□□□ 0.06
PCDHGB1-201ENST00000523390 TSPY26PQ9H489 355 aa15.46■□□□□ 0.06
PCDHGB1-201ENST00000523390 ATP6V1AP38606 617 aa15.45■□□□□ 0.06
PCDHGB1-201ENST00000523390 RBM5P52756 815 aaKnown RBP eCLIP15.45■□□□□ 0.06
PCDHGB1-201ENST00000523390 MAP3K12Q12852 859 aa15.45■□□□□ 0.06
PCDHGB1-201ENST00000523390 ZNF790Q6PG37 636 aa15.45■□□□□ 0.06
PCDHGB1-201ENST00000523390 ANKIB1Q9P2G1 1089 aa15.45■□□□□ 0.06
PCDHGB1-201ENST00000523390 NCBP3Q53F19 620 aaKnown RBP15.45■□□□□ 0.06
PCDHGB1-201ENST00000523390 PIBF1Q8WXW3 757 aa15.45■□□□□ 0.06
PCDHGB1-201ENST00000523390 KIF1BO60333 1816 aa15.45■□□□□ 0.06
PCDHGB1-201ENST00000523390 ZNF592Q92610 1267 aa15.45■□□□□ 0.06
PCDHGB1-201ENST00000523390 PCMTD1Q96MG8 357 aaPredicted RBP15.45■□□□□ 0.06
PCDHGB1-201ENST00000523390 VSIG10Q8N0Z9 540 aa15.44■□□□□ 0.06
PCDHGB1-201ENST00000523390 PRR36Q9H6K5 1346 aa15.44■□□□□ 0.06
PCDHGB1-201ENST00000523390 HSP90AA2PQ14568 343 aaPredicted RBP15.44■□□□□ 0.06
PCDHGB1-201ENST00000523390 ANKRD20A12PQ8NF67 263 aa15.44■□□□□ 0.06
PCDHGB1-201ENST00000523390 SEC24BO95487 1268 aa15.44■□□□□ 0.06
PCDHGB1-201ENST00000523390 FAM43AQ8N2R8 423 aa15.44■□□□□ 0.06
PCDHGB1-201ENST00000523390 SPATA32Q96LK8 384 aa15.44■□□□□ 0.06
PCDHGB1-201ENST00000523390 LIMCH1Q9UPQ0 1083 aa15.44■□□□□ 0.06
PCDHGB1-201ENST00000523390 PLEKHG1Q9ULL1 1385 aa15.44■□□□□ 0.06
PCDHGB1-201ENST00000523390 INSRP06213 1382 aa15.44■□□□□ 0.06
PCDHGB1-201ENST00000523390 HAND2P61296 217 aa15.43■□□□□ 0.06
PCDHGB1-201ENST00000523390 PLEKHM2Q8IWE5 1019 aa15.43■□□□□ 0.06
PCDHGB1-201ENST00000523390 MPNDQ8N594 471 aa15.43■□□□□ 0.06
PCDHGB1-201ENST00000523390 TRIM5Q9C035 493 aa15.43■□□□□ 0.06
PCDHGB1-201ENST00000523390 SLAIN2Q9P270 581 aa15.43■□□□□ 0.06
PCDHGB1-201ENST00000523390 TET3O43151 1660 aa15.43■□□□□ 0.06
PCDHGB1-201ENST00000523390 OTUD7AQ8TE49 926 aaPredicted RBP15.43■□□□□ 0.06
PCDHGB1-201ENST00000523390 TPM2P07951 284 aa15.42■□□□□ 0.06
PCDHGB1-201ENST00000523390 TCEANC2Q96MN5 208 aa15.42■□□□□ 0.06
PCDHGB1-201ENST00000523390 IQGAP3Q86VI3 1631 aa15.42■□□□□ 0.06
PCDHGB1-201ENST00000523390 TNPO1Q92973 898 aaKnown RBP15.42■□□□□ 0.06
PCDHGB1-201ENST00000523390 AK7Q96M32 723 aa15.42■□□□□ 0.06
PCDHGB1-201ENST00000523390 CDC5LQ99459 802 aaKnown RBP15.42■□□□□ 0.06
PCDHGB1-201ENST00000523390 ESYT1Q9BSJ8 1104 aa15.42■□□□□ 0.06
PCDHGB1-201ENST00000523390 PCDH11XQ9BZA7 1347 aa15.42■□□□□ 0.06
PCDHGB1-201ENST00000523390 PCDH11YQ9BZA8 1340 aa15.42■□□□□ 0.06
PCDHGB1-201ENST00000523390 OLFM4Q6UX06 510 aa15.42■□□□□ 0.06
PCDHGB1-201ENST00000523390 ZSCAN29Q8IWY8 852 aaPredicted RBP15.42■□□□□ 0.06
PCDHGB1-201ENST00000523390 CCDC82Q8N4S0 544 aa15.42■□□□□ 0.06
PCDHGB1-201ENST00000523390 JMYQ8N9B5 988 aa15.42■□□□□ 0.06
PCDHGB1-201ENST00000523390 LMTK3Q96Q04 1460 aa15.42■□□□□ 0.06
PCDHGB1-201ENST00000523390 USP19O94966 1318 aa15.41■□□□□ 0.06
PCDHGB1-201ENST00000523390 ZNF213O14771 459 aa15.41■□□□□ 0.06
PCDHGB1-201ENST00000523390 NAT10Q9H0A0 1025 aaKnown RBP15.41■□□□□ 0.06
PCDHGB1-201ENST00000523390 TNMDQ9H2S6 317 aa15.41■□□□□ 0.06
PCDHGB1-201ENST00000523390 ARAP3Q8WWN8 1544 aa15.41■□□□□ 0.06
PCDHGB1-201ENST00000523390 SOS1Q07889 1333 aaPredicted RBP15.41■□□□□ 0.06
PCDHGB1-201ENST00000523390 PPFIA3O75145 1194 aa15.41■□□□□ 0.06
PCDHGB1-201ENST00000523390 CDKL5O76039 1030 aa15.41■□□□□ 0.06
PCDHGB1-201ENST00000523390 GUCY1B3Q02153 619 aa15.41■□□□□ 0.06
PCDHGB1-201ENST00000523390 IL17REQ8NFR9 667 aa15.41■□□□□ 0.06
PCDHGB1-201ENST00000523390 LETM1O95202 739 aaPredicted RBP15.41■□□□□ 0.06
PCDHGB1-201ENST00000523390 SH2B1Q9NRF2 756 aaPredicted RBP15.41■□□□□ 0.06
PCDHGB1-201ENST00000523390 IQSEC3Q9UPP2 1182 aaPredicted RBP15.41■□□□□ 0.06
PCDHGB1-201ENST00000523390 CCT2P78371 535 aaKnown RBP15.41■□□□□ 0.06
PCDHGB1-201ENST00000523390 SHROOM2Q13796 1616 aa15.4■□□□□ 0.06
PCDHGB1-201ENST00000523390 CDC42BPBQ9Y5S2 1711 aa15.4■□□□□ 0.06
PCDHGB1-201ENST00000523390 ATP2B3Q16720 1220 aa15.4■□□□□ 0.06
PCDHGB1-201ENST00000523390 DZIP1Q86YF9 867 aaKnown RBP15.4■□□□□ 0.06
PCDHGB1-201ENST00000523390 CCAR2Q8N163 923 aaKnown RBP15.4■□□□□ 0.06
PCDHGB1-201ENST00000523390 DZIP3Q86Y13 1208 aaKnown RBP15.4■□□□□ 0.06
PCDHGB1-201ENST00000523390 BICC1Q9H694 974 aaKnown RBP15.4■□□□□ 0.06
PCDHGB1-201ENST00000523390 NIP7Q9Y221 180 aaKnown RBP eCLIP15.4■□□□□ 0.06
PCDHGB1-201ENST00000523390 KCNQ3O43525 872 aa15.39■□□□□ 0.06
PCDHGB1-201ENST00000523390 NBPF5PQ86XG9 351 aaPredicted RBP15.39■□□□□ 0.06
PCDHGB1-201ENST00000523390 RPGRQ92834 1020 aaKnown RBP15.39■□□□□ 0.06
PCDHGB1-201ENST00000523390 ZNF496Q96IT1 587 aaPredicted RBP15.39■□□□□ 0.06
PCDHGB1-201ENST00000523390 GDPD2Q9HCC8 539 aa15.39■□□□□ 0.06
PCDHGB1-201ENST00000523390 CLTCL1P53675 1640 aa15.39■□□□□ 0.05
PCDHGB1-201ENST00000523390 USP5P45974 858 aa15.39■□□□□ 0.05
PCDHGB1-201ENST00000523390 PDE4CQ08493 712 aa15.39■□□□□ 0.05
PCDHGB1-201ENST00000523390 PLEKHF1Q96S99 279 aa15.39■□□□□ 0.05
PCDHGB1-201ENST00000523390 GRPEL1Q9HAV7 217 aa15.39■□□□□ 0.05
PCDHGB1-201ENST00000523390 ZNF219Q9P2Y4 722 aaPredicted RBP15.39■□□□□ 0.05
PCDHGB1-201ENST00000523390 ARHGEF10O15013 1369 aa15.39■□□□□ 0.05
PCDHGB1-201ENST00000523390 RFC4P35249 363 aa15.39■□□□□ 0.05
PCDHGB1-201ENST00000523390 IL15P40933 162 aaPredicted RBP15.39■□□□□ 0.05
PCDHGB1-201ENST00000523390 CFAP45Q9UL16 551 aa15.39■□□□□ 0.05
PCDHGB1-201ENST00000523390 SYNMO15061 1565 aa15.39■□□□□ 0.05
PCDHGB1-201ENST00000523390 A1BGP04217 495 aa15.38■□□□□ 0.05
PCDHGB1-201ENST00000523390 CCDC192P0DO97 292 aa15.38■□□□□ 0.05
PCDHGB1-201ENST00000523390 HOMER1Q86YM7 354 aa15.38■□□□□ 0.05
PCDHGB1-201ENST00000523390 CCDC43Q96MW1 224 aaKnown RBP15.38■□□□□ 0.05
PCDHGB1-201ENST00000523390 BABAM1Q9NWV8 329 aa15.38■□□□□ 0.05
PCDHGB1-201ENST00000523390 NLRP1Q9C000 1473 aa15.38■□□□□ 0.05
PCDHGB1-201ENST00000523390 C6orf229H3BNL8 230 aa15.38■□□□□ 0.05
PCDHGB1-201ENST00000523390 RANBP6O60518 1105 aaKnown RBP15.38■□□□□ 0.05
PCDHGB1-201ENST00000523390 KDM2BQ8NHM5 1336 aa15.38■□□□□ 0.05
PCDHGB1-201ENST00000523390 TMEM94Q12767 1356 aa15.38■□□□□ 0.05
PCDHGB1-201ENST00000523390 RAB11FIP4Q86YS3 637 aa15.38■□□□□ 0.05
PCDHGB1-201ENST00000523390 HELBQ8NG08 1087 aaPredicted RBP15.38■□□□□ 0.05
PCDHGB1-201ENST00000523390 KLHDC4Q8TBB5 520 aa15.38■□□□□ 0.05
PCDHGB1-201ENST00000523390 SLC52A2Q9HAB3 445 aa15.38■□□□□ 0.05
PCDHGB1-201ENST00000523390 NBPF7P0C2Y1 421 aaPredicted RBP15.38■□□□□ 0.05
PCDHGB1-201ENST00000523390 EIF4A1P60842 406 aaKnown RBP15.38■□□□□ 0.05
PCDHGB1-201ENST00000523390 FAM135BQ49AJ0 1406 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms