RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	TTLL5	Q6EMB2	1281 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	SLC4A10	Q6U841	1118 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	NYAP1	Q6ZVC0	841 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	APLF	Q8IW19	511 aa	Predicted RBP	4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	MICALL1	Q8N3F8	863 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	BICD2	Q8TD16	824 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	SH3GL3	Q99963	347 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	THUMPD2	Q9BTF0	503 aa	Known RBP	4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	SRRT	Q9BXP5	876 aa	Known RBP	4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	PRDM16	Q9HAZ2	1276 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	ZBTB12	Q9Y330	459 aa	Predicted RBP	4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	WDR7	Q9Y4E6	1490 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	PPIP5K1	Q6PFW1	1433 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	MAP3K5	Q99683	1374 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	GCFC2	P16383	781 aa	Known RBP	4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	ACTN2	P35609	894 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	EIF5	P55010	431 aa	Known RBP	4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	CCDC93	Q567U6	631 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	AFAP1	Q8N556	730 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	FUCA2	Q9BTY2	467 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	PDZRN3	Q9UPQ7	1066 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	FANCA	O15360	1455 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	CDC42BPG	Q6DT37	1551 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	IPO8	O15397	1037 aa	Known RBP	4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	IGSF3	O75054	1194 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	TUBB4B	P68371	445 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	HSP90B2P	Q58FF3	399 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	WLS	Q5T9L3	541 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	KRBA2	Q6ZNG9	492 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	THEMIS	Q8N1K5	641 aa	Predicted RBP	4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	RAPGEF4	Q8WZA2	1011 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	FAXDC2	Q96IV6	333 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	CLEC11A	Q9Y240	323 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	RPAP1	Q9BWH6	1393 aa	Predicted RBP	4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	EPB41L2	O43491	1005 aa	Known RBP	4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	RAD21	O60216	631 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	PLIN1	O60240	522 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	SSFA2	P28290	1259 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	PRPH	P41219	470 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	PLA2G4A	P47712	749 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	LMNB2	Q03252	620 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	HSP90AB4P	Q58FF6	505 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	BMP2KL	Q5H9B9	411 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	RBM12B	Q8IXT5	1001 aa	Known RBP	4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	CCDC112	Q8NEF3	446 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	TOMM22	Q9NS69	142 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	HOMER3	Q9NSC5	361 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	ADGRL3	Q9HAR2	1447 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288	SIGLEC1	Q9BZZ2	1709 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288		H0YHG0	523 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	ZNF428	Q96B54	188 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	MIEF2	Q96C03	454 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	CHMP4C	Q96CF2	233 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	CDCA7L	Q96GN5	454 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	SMC3	Q9UQE7	1217 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	KIF24	Q5T7B8	1368 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	DNAH14	Q0VDD8	3507 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	PRAG1	Q86YV5	1406 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288		H7C1W4	665 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	RAPGEF3	O95398	923 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	SETSIP	P0DME0	302 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	CCDC183	Q5T5S1	534 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	ANKLE2	Q86XL3	938 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	SDR16C5	Q8N3Y7	309 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	CCDC191	Q8NCU4	936 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	NUCKS1	Q9H1E3	243 aa	Known RBP	4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	RPS6KL1	Q9Y6S9	549 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	LMTK2	Q8IWU2	1503 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	DEPDC5	O75140	1603 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	SMC2	O95347	1197 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	IMPDH2	P12268	514 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	CCDC27	Q2M243	656 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	RINL	Q6ZS11	566 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	FAM200A	Q8TCP9	573 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	GNL3L	Q9NVN8	582 aa	Known RBP	4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	TMEM63C	Q9P1W3	806 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	LRRFIP2	Q9Y608	721 aa	Known RBP	4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	ABCC3	O15438	1527 aa		4.52	□□□□□ -1.69
FAM49B-225	ENST00000523288	LIN7A	O14910	233 aa	Predicted RBP	4.51	□□□□□ -1.69
FAM49B-225	ENST00000523288	CAVIN2	O95810	425 aa		4.51	□□□□□ -1.69
FAM49B-225	ENST00000523288	RWDD2B	P57060	319 aa		4.51	□□□□□ -1.69
FAM49B-225	ENST00000523288	GNL2	Q13823	731 aa	Known RBP	4.51	□□□□□ -1.69
FAM49B-225	ENST00000523288	PLCB4	Q15147	1175 aa		4.51	□□□□□ -1.69
FAM49B-225	ENST00000523288	TAF7	Q15545	349 aa	Predicted RBP	4.51	□□□□□ -1.69
FAM49B-225	ENST00000523288	BRAP	Q7Z569	592 aa		4.51	□□□□□ -1.69
FAM49B-225	ENST00000523288	FILIP1	Q7Z7B0	1213 aa		4.51	□□□□□ -1.69
FAM49B-225	ENST00000523288	SPATS2	Q86XZ4	545 aa	Known RBP	4.51	□□□□□ -1.69
FAM49B-225	ENST00000523288	TEX11	Q8IYF3	940 aa		4.51	□□□□□ -1.69
FAM49B-225	ENST00000523288	PAGR1	Q9BTK6	254 aa		4.51	□□□□□ -1.69
FAM49B-225	ENST00000523288	VEZT	Q9HBM0	779 aa		4.51	□□□□□ -1.69
FAM49B-225	ENST00000523288	CEP126	Q9P2H0	1117 aa		4.51	□□□□□ -1.69
FAM49B-225	ENST00000523288	CLIP2	Q9UDT6	1046 aa		4.51	□□□□□ -1.69
FAM49B-225	ENST00000523288	ZFHX4	Q86UP3	3567 aa		4.51	□□□□□ -1.69
FAM49B-225	ENST00000523288	BRCA2	P51587	3418 aa		4.51	□□□□□ -1.69
FAM49B-225	ENST00000523288	C9orf84	Q5VXU9	1444 aa		4.51	□□□□□ -1.69
FAM49B-225	ENST00000523288	NRXN1	Q9ULB1	1477 aa		4.51	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms