RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 CCDC24Q8N4L8 307 aa20.02■□□□□ 0.8
PCM1-218ENST00000523055 BRIP1Q9BX63 1249 aa20.02■□□□□ 0.8
PCM1-218ENST00000523055 PRKRIP1Q9H875 184 aaPredicted RBP20.02■□□□□ 0.8
PCM1-218ENST00000523055 SLX4Q8IY92 1834 aa20.02■□□□□ 0.79
PCM1-218ENST00000523055 ITGBL1O95965 494 aaPredicted RBP20.02■□□□□ 0.79
PCM1-218ENST00000523055 PRR5LQ6MZQ0 368 aa20.02■□□□□ 0.79
PCM1-218ENST00000523055 VSIG10Q8N0Z9 540 aa20.02■□□□□ 0.79
PCM1-218ENST00000523055 CANXP27824 592 aaKnown RBP20.01■□□□□ 0.79
PCM1-218ENST00000523055 L3MBTL3Q96JM7 780 aaPredicted RBP20.01■□□□□ 0.79
PCM1-218ENST00000523055 TAOK3Q9H2K8 898 aa20.01■□□□□ 0.79
PCM1-218ENST00000523055 KDM3BQ7LBC6 1761 aa20■□□□□ 0.79
PCM1-218ENST00000523055 LBX1P52954 281 aa20■□□□□ 0.79
PCM1-218ENST00000523055 LDHDQ86WU2 507 aa20■□□□□ 0.79
PCM1-218ENST00000523055 TAF1DQ9H5J8 278 aaPredicted RBP20■□□□□ 0.79
PCM1-218ENST00000523055 KCNQ3O43525 872 aa19.99■□□□□ 0.79
PCM1-218ENST00000523055 PDE6BP35913 854 aa19.99■□□□□ 0.79
PCM1-218ENST00000523055 PDZRN3Q9UPQ7 1066 aa19.99■□□□□ 0.79
PCM1-218ENST00000523055 ZNF790Q6PG37 636 aa19.98■□□□□ 0.79
PCM1-218ENST00000523055 TTC5Q8N0Z6 440 aa19.98■□□□□ 0.79
PCM1-218ENST00000523055 RTF1Q92541 710 aaKnown RBP19.98■□□□□ 0.79
PCM1-218ENST00000523055 ZNF496Q96IT1 587 aaPredicted RBP19.98■□□□□ 0.79
PCM1-218ENST00000523055 SCN4AP35499 1836 aa19.97■□□□□ 0.79
PCM1-218ENST00000523055 ZNF316A6NFI3 1004 aaPredicted RBP19.97■□□□□ 0.79
PCM1-218ENST00000523055 TMEM88BA6NKF7 163 aa19.97■□□□□ 0.79
PCM1-218ENST00000523055 FAM161AQ3B820 660 aa19.97■□□□□ 0.79
PCM1-218ENST00000523055 ABHD8Q96I13 439 aa19.97■□□□□ 0.79
PCM1-218ENST00000523055 SCN7AQ01118 1682 aa19.97■□□□□ 0.79
PCM1-218ENST00000523055 ADAMTSL1Q8N6G6 1762 aa19.97■□□□□ 0.79
PCM1-218ENST00000523055 HSPA8P11142 646 aaKnown RBP19.96■□□□□ 0.79
PCM1-218ENST00000523055 PRPF40BQ6NWY9 871 aaKnown RBP19.96■□□□□ 0.79
PCM1-218ENST00000523055 C7orf43Q8WVR3 580 aa19.96■□□□□ 0.79
PCM1-218ENST00000523055 HEG1Q9ULI3 1381 aa19.95■□□□□ 0.78
PCM1-218ENST00000523055 IQCA1LA6NCM1 817 aa19.95■□□□□ 0.78
PCM1-218ENST00000523055 BTBD11A6QL63 1104 aa19.95■□□□□ 0.78
PCM1-218ENST00000523055 SRGNP10124 158 aa19.95■□□□□ 0.78
PCM1-218ENST00000523055 AIDAQ96BJ3 306 aa19.95■□□□□ 0.78
PCM1-218ENST00000523055 MAPK8IP3Q9UPT6 1336 aa19.95■□□□□ 0.78
PCM1-218ENST00000523055 NEFMP07197 916 aa19.94■□□□□ 0.78
PCM1-218ENST00000523055 NFE2L2Q16236 605 aa19.94■□□□□ 0.78
PCM1-218ENST00000523055 THUMPD2Q9BTF0 503 aaKnown RBP19.94■□□□□ 0.78
PCM1-218ENST00000523055 TBC1D2BQ9UPU7 963 aa19.94■□□□□ 0.78
PCM1-218ENST00000523055 LAMB4A4D0S4 1761 aa19.94■□□□□ 0.78
PCM1-218ENST00000523055 ARFGEF2Q9Y6D5 1785 aa19.94■□□□□ 0.78
PCM1-218ENST00000523055 RASSF10A6NK89 507 aa19.93■□□□□ 0.78
PCM1-218ENST00000523055 STYK1Q6J9G0 422 aa19.93■□□□□ 0.78
PCM1-218ENST00000523055 CCDC146Q8IYE0 955 aa19.93■□□□□ 0.78
PCM1-218ENST00000523055 CNKSR1Q969H4 720 aa19.93■□□□□ 0.78
PCM1-218ENST00000523055 CACNA1SQ13698 1873 aa19.93■□□□□ 0.78
PCM1-218ENST00000523055 ZNF541Q9H0D2 1346 aa19.93■□□□□ 0.78
PCM1-218ENST00000523055 A0A087WZG4 1122 aa19.93■□□□□ 0.78
PCM1-218ENST00000523055 HTATSF1O43719 755 aaKnown RBP19.93■□□□□ 0.78
PCM1-218ENST00000523055 PRAMEF22A3QJZ6 481 aa19.92■□□□□ 0.78
PCM1-218ENST00000523055 STARD3NLO95772 234 aa19.92■□□□□ 0.78
PCM1-218ENST00000523055 MIS18AQ9NYP9 233 aa19.92■□□□□ 0.78
PCM1-218ENST00000523055 CAMTA2O94983 1202 aa19.91■□□□□ 0.78
PCM1-218ENST00000523055 MASTLQ96GX5 879 aa19.91■□□□□ 0.78
PCM1-218ENST00000523055 FMNL2Q96PY5 1086 aa19.91■□□□□ 0.78
PCM1-218ENST00000523055 EAPPQ56P03 285 aaPredicted RBP19.9■□□□□ 0.78
PCM1-218ENST00000523055 CNBD1Q8NA66 436 aa19.9■□□□□ 0.78
PCM1-218ENST00000523055 IL6STP40189 918 aaPredicted RBP19.89■□□□□ 0.77
PCM1-218ENST00000523055 WDR43Q15061 677 aaKnown RBP eCLIP19.89■□□□□ 0.77
PCM1-218ENST00000523055 DEFB115Q30KQ5 88 aa19.89■□□□□ 0.77
PCM1-218ENST00000523055 CCDC184Q52MB2 194 aa19.89■□□□□ 0.77
PCM1-218ENST00000523055 SOGA3Q5TF21 947 aa19.89■□□□□ 0.77
PCM1-218ENST00000523055 PNNQ9H307 717 aaKnown RBP19.89■□□□□ 0.77
PCM1-218ENST00000523055 ADAMTS8Q9UP79 889 aa19.89■□□□□ 0.77
PCM1-218ENST00000523055 RRP7AQ9Y3A4 280 aaKnown RBP19.89■□□□□ 0.77
PCM1-218ENST00000523055 BCORQ6W2J9 1755 aa19.89■□□□□ 0.77
PCM1-218ENST00000523055 EPHX2P34913 555 aa19.88■□□□□ 0.77
PCM1-218ENST00000523055 RGS19P49795 217 aa19.88■□□□□ 0.77
PCM1-218ENST00000523055 MAP1SQ66K74 1059 aaPredicted RBP19.88■□□□□ 0.77
PCM1-218ENST00000523055 OLFM4Q6UX06 510 aa19.88■□□□□ 0.77
PCM1-218ENST00000523055 HACL1Q9UJ83 578 aa19.88■□□□□ 0.77
PCM1-218ENST00000523055 WDR33Q9C0J8 1336 aaKnown RBP19.88■□□□□ 0.77
PCM1-218ENST00000523055 TMPOP42166 694 aaKnown RBP19.87■□□□□ 0.77
PCM1-218ENST00000523055 TAF7Q15545 349 aaPredicted RBP19.87■□□□□ 0.77
PCM1-218ENST00000523055 CNTROBQ8N137 903 aa19.87■□□□□ 0.77
PCM1-218ENST00000523055 SETDB2Q96T68 719 aa19.87■□□□□ 0.77
PCM1-218ENST00000523055 ZNF277Q9NRM2 450 aaPredicted RBP19.87■□□□□ 0.77
PCM1-218ENST00000523055 A1BGP04217 495 aa19.86■□□□□ 0.77
PCM1-218ENST00000523055 PIP4K2AP48426 406 aaPredicted RBP19.86■□□□□ 0.77
PCM1-218ENST00000523055 RIPK4P57078 832 aa19.86■□□□□ 0.77
PCM1-218ENST00000523055 FKBP4Q02790 459 aaKnown RBP eCLIP19.86■□□□□ 0.77
PCM1-218ENST00000523055 CCDC93Q567U6 631 aa19.86■□□□□ 0.77
PCM1-218ENST00000523055 ZNF330Q9Y3S2 320 aaPredicted RBP19.86■□□□□ 0.77
PCM1-218ENST00000523055 USP16Q9Y5T5 823 aa19.86■□□□□ 0.77
PCM1-218ENST00000523055 KLRG2A4D1S0 409 aaPredicted RBP19.85■□□□□ 0.77
PCM1-218ENST00000523055 MAP2K1Q02750 393 aaPredicted RBP19.85■□□□□ 0.77
PCM1-218ENST00000523055 NEUROD2Q15784 382 aa19.85■□□□□ 0.77
PCM1-218ENST00000523055 RNF123Q5XPI4 1314 aa19.85■□□□□ 0.77
PCM1-218ENST00000523055 THSD7BQ9C0I4 1608 aa19.85■□□□□ 0.77
PCM1-218ENST00000523055 SNED1Q8TER0 1413 aa19.85■□□□□ 0.77
PCM1-218ENST00000523055 FZD9O00144 591 aa19.85■□□□□ 0.77
PCM1-218ENST00000523055 ST5P78524 1137 aa19.85■□□□□ 0.77
PCM1-218ENST00000523055 CLEC11AQ9Y240 323 aa19.85■□□□□ 0.77
PCM1-218ENST00000523055 RUNDC1Q96C34 613 aa19.84■□□□□ 0.77
PCM1-218ENST00000523055 TEX13AQ9BXU3 409 aaPredicted RBP19.84■□□□□ 0.77
PCM1-218ENST00000523055 FMR1Q06787 632 aaKnown RBP eCLIP19.83■□□□□ 0.764e-7■□□□□ 11
PCM1-218ENST00000523055 PNMA8AQ86V59 439 aaPredicted RBP19.83■□□□□ 0.76
PCM1-218ENST00000523055 SNRPA1P09661 255 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms