RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 CLEC4GQ6UXB4 293 aa10.54□□□□□ -0.72
GM2A-202ENST00000523004 DZIP3Q86Y13 1208 aaKnown RBP10.54□□□□□ -0.72
GM2A-202ENST00000523004 CNBD1Q8NA66 436 aa10.54□□□□□ -0.72
GM2A-202ENST00000523004 LTBP3Q9NS15 1303 aa10.54□□□□□ -0.72
GM2A-202ENST00000523004 PRAMEF22A3QJZ6 481 aa10.53□□□□□ -0.72
GM2A-202ENST00000523004 SNRPA1P09661 255 aaKnown RBP10.53□□□□□ -0.72
GM2A-202ENST00000523004 U2AF1L5P0DN76 240 aaPredicted RBP10.53□□□□□ -0.72
GM2A-202ENST00000523004 PPP2R1AP30153 589 aa10.53□□□□□ -0.72
GM2A-202ENST00000523004 U2AF1Q01081 240 aaKnown RBP eCLIP10.53□□□□□ -0.72
GM2A-202ENST00000523004 MAPK8IP2Q13387 824 aaPredicted RBP10.53□□□□□ -0.72
GM2A-202ENST00000523004 STYK1Q6J9G0 422 aa10.53□□□□□ -0.72
GM2A-202ENST00000523004 RTF1Q92541 710 aaKnown RBP10.53□□□□□ -0.72
GM2A-202ENST00000523004 CNKSR1Q969H4 720 aa10.53□□□□□ -0.72
GM2A-202ENST00000523004 ZNF219Q9P2Y4 722 aaPredicted RBP10.53□□□□□ -0.72
GM2A-202ENST00000523004 CACNA1SQ13698 1873 aa10.53□□□□□ -0.72
GM2A-202ENST00000523004 ARFGEF2Q9Y6D5 1785 aa10.52□□□□□ -0.72
GM2A-202ENST00000523004 RGL2O15211 777 aa10.52□□□□□ -0.73
GM2A-202ENST00000523004 HTATSF1O43719 755 aaKnown RBP10.52□□□□□ -0.73
GM2A-202ENST00000523004 PIP4K2AP48426 406 aaPredicted RBP10.52□□□□□ -0.73
GM2A-202ENST00000523004 ST5P78524 1137 aa10.52□□□□□ -0.73
GM2A-202ENST00000523004 ERFEQ4G0M1 354 aa10.52□□□□□ -0.73
GM2A-202ENST00000523004 PRPF40BQ6NWY9 871 aaKnown RBP10.52□□□□□ -0.73
GM2A-202ENST00000523004 MCM10Q7L590 875 aa10.52□□□□□ -0.73
GM2A-202ENST00000523004 MASTLQ96GX5 879 aa10.52□□□□□ -0.73
GM2A-202ENST00000523004 KLRG2A4D1S0 409 aaPredicted RBP10.51□□□□□ -0.73
GM2A-202ENST00000523004 NBPF26B4DH59 902 aa10.51□□□□□ -0.73
GM2A-202ENST00000523004 NPHP1O15259 732 aa10.51□□□□□ -0.73
GM2A-202ENST00000523004 SOGA3Q5TF21 947 aa10.51□□□□□ -0.73
GM2A-202ENST00000523004 NBPF10Q6P3W6 841 aaKnown RBP10.51□□□□□ -0.73
GM2A-202ENST00000523004 NBPF15Q8N660 670 aa10.51□□□□□ -0.73
GM2A-202ENST00000523004 C7orf43Q8WVR3 580 aa10.51□□□□□ -0.73
GM2A-202ENST00000523004 TAOK3Q9H2K8 898 aa10.51□□□□□ -0.73
GM2A-202ENST00000523004 ZNF652Q9Y2D9 606 aa10.51□□□□□ -0.73
GM2A-202ENST00000523004 DCTN1Q14203 1278 aa10.5□□□□□ -0.73
GM2A-202ENST00000523004 TAF7Q15545 349 aaPredicted RBP10.5□□□□□ -0.73
GM2A-202ENST00000523004 NBPF5PQ86XG9 351 aaPredicted RBP10.5□□□□□ -0.73
GM2A-202ENST00000523004 NPR1P16066 1061 aa10.49□□□□□ -0.73
GM2A-202ENST00000523004 COL13A1Q5TAT6 717 aaPredicted RBP10.49□□□□□ -0.73
GM2A-202ENST00000523004 TPTE2Q6XPS3 522 aa10.49□□□□□ -0.73
GM2A-202ENST00000523004 DLG5Q8TDM6 1919 aa10.48□□□□□ -0.73
GM2A-202ENST00000523004 DDNO94850 711 aaPredicted RBP10.48□□□□□ -0.73
GM2A-202ENST00000523004 NIP7Q9Y221 180 aaKnown RBP eCLIP10.48□□□□□ -0.73
GM2A-202ENST00000523004 SCN4AP35499 1836 aa10.47□□□□□ -0.73
GM2A-202ENST00000523004 HLFQ16534 295 aa10.47□□□□□ -0.73
GM2A-202ENST00000523004 CCDC93Q567U6 631 aa10.47□□□□□ -0.73
GM2A-202ENST00000523004 CHADLQ6NUI6 762 aa10.47□□□□□ -0.73
GM2A-202ENST00000523004 L3MBTL3Q96JM7 780 aaPredicted RBP10.47□□□□□ -0.73
GM2A-202ENST00000523004 MIS18AQ9NYP9 233 aa10.47□□□□□ -0.73
GM2A-202ENST00000523004 LAMB4A4D0S4 1761 aa10.47□□□□□ -0.73
GM2A-202ENST00000523004 NUP98P52948 1817 aa10.47□□□□□ -0.73
GM2A-202ENST00000523004 POTEIP0CG38 1075 aa10.46□□□□□ -0.73
GM2A-202ENST00000523004 POTEJP0CG39 1038 aa10.46□□□□□ -0.73
GM2A-202ENST00000523004 FKBP4Q02790 459 aaKnown RBP eCLIP10.46□□□□□ -0.73
GM2A-202ENST00000523004 PNISRQ8TF01 805 aaKnown RBP10.46□□□□□ -0.73
GM2A-202ENST00000523004 PLEKHF1Q96S99 279 aa10.46□□□□□ -0.73
GM2A-202ENST00000523004 KDM3BQ7LBC6 1761 aa10.46□□□□□ -0.74
GM2A-202ENST00000523004 IQCA1LA6NCM1 817 aa10.45□□□□□ -0.74
GM2A-202ENST00000523004 FAM177BA6PVY3 158 aa10.45□□□□□ -0.74
GM2A-202ENST00000523004 ERVV-1B6SEH8 477 aa10.45□□□□□ -0.74
GM2A-202ENST00000523004 HSPA1AP0DMV8 641 aaKnown RBP10.45□□□□□ -0.74
GM2A-202ENST00000523004 HSPA1BP0DMV9 641 aaKnown RBP10.45□□□□□ -0.74
GM2A-202ENST00000523004 CRY2Q49AN0 593 aa10.45□□□□□ -0.74
GM2A-202ENST00000523004 OLFM4Q6UX06 510 aa10.45□□□□□ -0.74
GM2A-202ENST00000523004 RTKN2Q8IZC4 609 aa10.45□□□□□ -0.74
GM2A-202ENST00000523004 CREBZFQ9NS37 354 aa10.45□□□□□ -0.74
GM2A-202ENST00000523004 NEFMP07197 916 aa10.44□□□□□ -0.74
GM2A-202ENST00000523004 GTF2E1P29083 439 aaPredicted RBP10.44□□□□□ -0.74
GM2A-202ENST00000523004 ALDH1B1P30837 517 aa10.44□□□□□ -0.74
GM2A-202ENST00000523004 EIF4A1P60842 406 aaKnown RBP10.44□□□□□ -0.74
GM2A-202ENST00000523004 LDHDQ86WU2 507 aa10.44□□□□□ -0.74
GM2A-202ENST00000523004 TAF1DQ9H5J8 278 aaPredicted RBP10.44□□□□□ -0.74
GM2A-202ENST00000523004 ZNF277Q9NRM2 450 aaPredicted RBP10.44□□□□□ -0.74
GM2A-202ENST00000523004 SNED1Q8TER0 1413 aa10.43□□□□□ -0.74
GM2A-202ENST00000523004 ABCC12Q96J65 1359 aa10.43□□□□□ -0.74
GM2A-202ENST00000523004 MAP3K15Q6ZN16 1313 aa10.43□□□□□ -0.74
GM2A-202ENST00000523004 PASKQ96RG2 1323 aa10.43□□□□□ -0.74
GM2A-202ENST00000523004 ZNF541Q9H0D2 1346 aa10.43□□□□□ -0.74
GM2A-202ENST00000523004 ZNF316A6NFI3 1004 aaPredicted RBP10.43□□□□□ -0.74
GM2A-202ENST00000523004 FZD9O00144 591 aa10.43□□□□□ -0.74
GM2A-202ENST00000523004 NFE2L2Q16236 605 aa10.43□□□□□ -0.74
GM2A-202ENST00000523004 TTLL7Q6ZT98 887 aa10.43□□□□□ -0.74
GM2A-202ENST00000523004 TNS4Q8IZW8 715 aa10.43□□□□□ -0.74
GM2A-202ENST00000523004 SYNE4Q8N205 404 aa10.43□□□□□ -0.74
GM2A-202ENST00000523004 NGEFQ8N5V2 710 aa10.43□□□□□ -0.74
GM2A-202ENST00000523004 NYXQ9GZU5 481 aa10.43□□□□□ -0.74
GM2A-202ENST00000523004 RIC1Q4ADV7 1423 aa10.42□□□□□ -0.74
GM2A-202ENST00000523004 ITGBL1O95965 494 aaPredicted RBP10.42□□□□□ -0.74
GM2A-202ENST00000523004 HOXA10P31260 410 aaPredicted RBP10.42□□□□□ -0.74
GM2A-202ENST00000523004 IARSP41252 1262 aaKnown RBP10.42□□□□□ -0.74
GM2A-202ENST00000523004 NCBP3Q53F19 620 aaKnown RBP10.42□□□□□ -0.74
GM2A-202ENST00000523004 NUTM1Q86Y26 1132 aa10.42□□□□□ -0.74
GM2A-202ENST00000523004 PSMD1Q99460 953 aa10.42□□□□□ -0.74
GM2A-202ENST00000523004 THUMPD2Q9BTF0 503 aaKnown RBP10.42□□□□□ -0.74
GM2A-202ENST00000523004 HACL1Q9UJ83 578 aa10.42□□□□□ -0.74
GM2A-202ENST00000523004 RRP7AQ9Y3A4 280 aaKnown RBP10.42□□□□□ -0.74
GM2A-202ENST00000523004 IBTKQ9P2D0 1353 aaPredicted RBP10.41□□□□□ -0.74
GM2A-202ENST00000523004 UBN2Q6ZU65 1347 aa10.41□□□□□ -0.74
GM2A-202ENST00000523004 MYL6BP14649 208 aa10.41□□□□□ -0.74
GM2A-202ENST00000523004 CC2D2BQ6DHV5 1058 aa10.41□□□□□ -0.74
GM2A-202ENST00000523004 KIF6Q6ZMV9 814 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms