RNA–Protein interactions for RNA: ENST00000522743.1

AP003351.1-201, humanhuman

TSL 3 BASIC

Gene AP003351.1, Length 668 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003351.1-201ENST00000522743 PNNQ9H307 717 aaKnown RBP17.26■□□□□ 0.35
AP003351.1-201ENST00000522743 SBF1O95248 1867 aa17.26■□□□□ 0.35
AP003351.1-201ENST00000522743 WDR90Q96KV7 1748 aa17.25■□□□□ 0.35
AP003351.1-201ENST00000522743 MCM10Q7L590 875 aa17.25■□□□□ 0.35
AP003351.1-201ENST00000522743 PNISRQ8TF01 805 aaKnown RBP17.25■□□□□ 0.35
AP003351.1-201ENST00000522743 ZNF219Q9P2Y4 722 aaPredicted RBP17.25■□□□□ 0.35
AP003351.1-201ENST00000522743 MYBBP1AQ9BQG0 1328 aaKnown RBP17.24■□□□□ 0.35
AP003351.1-201ENST00000522743 LTBP3Q9NS15 1303 aa17.24■□□□□ 0.35
AP003351.1-201ENST00000522743 NFKBIEO00221 500 aa17.24■□□□□ 0.35
AP003351.1-201ENST00000522743 GTF2E1P29083 439 aaPredicted RBP17.24■□□□□ 0.35
AP003351.1-201ENST00000522743 TPTE2Q6XPS3 522 aa17.24■□□□□ 0.35
AP003351.1-201ENST00000522743 PRKRIP1Q9H875 184 aaPredicted RBP17.24■□□□□ 0.35
AP003351.1-201ENST00000522743 TAF7Q15545 349 aaPredicted RBP17.23■□□□□ 0.35
AP003351.1-201ENST00000522743 DNAJC5GQ8N7S2 189 aa17.23■□□□□ 0.35
AP003351.1-201ENST00000522743 TIAM2Q8IVF5 1701 aa17.22■□□□□ 0.35
AP003351.1-201ENST00000522743 KCNQ3O43525 872 aa17.22■□□□□ 0.35
AP003351.1-201ENST00000522743 PRPF40BQ6NWY9 871 aaKnown RBP17.22■□□□□ 0.35
AP003351.1-201ENST00000522743 CCDC24Q8N4L8 307 aa17.22■□□□□ 0.35
AP003351.1-201ENST00000522743 USP16Q9Y5T5 823 aa17.22■□□□□ 0.35
AP003351.1-201ENST00000522743 SRGNP10124 158 aa17.21■□□□□ 0.35
AP003351.1-201ENST00000522743 NPR1P16066 1061 aa17.21■□□□□ 0.35
AP003351.1-201ENST00000522743 CCDC93Q567U6 631 aa17.21■□□□□ 0.35
AP003351.1-201ENST00000522743 NIP7Q9Y221 180 aaKnown RBP eCLIP17.21■□□□□ 0.35
AP003351.1-201ENST00000522743 MAPK8IP3Q9UPT6 1336 aa17.21■□□□□ 0.34
AP003351.1-201ENST00000522743 BCORQ6W2J9 1755 aa17.2■□□□□ 0.34
AP003351.1-201ENST00000522743 IQCA1LA6NCM1 817 aa17.2■□□□□ 0.34
AP003351.1-201ENST00000522743 NYXQ9GZU5 481 aa17.2■□□□□ 0.34
AP003351.1-201ENST00000522743 KIF6Q6ZMV9 814 aa17.19■□□□□ 0.34
AP003351.1-201ENST00000522743 ANKRD31Q8N7Z5 1873 aa17.18■□□□□ 0.34
AP003351.1-201ENST00000522743 ALDH1B1P30837 517 aa17.18■□□□□ 0.34
AP003351.1-201ENST00000522743 PIP4K2AP48426 406 aaPredicted RBP17.18■□□□□ 0.34
AP003351.1-201ENST00000522743 DCTN1Q14203 1278 aa17.18■□□□□ 0.34
AP003351.1-201ENST00000522743 RTKN2Q8IZC4 609 aa17.18■□□□□ 0.34
AP003351.1-201ENST00000522743 JMYQ8N9B5 988 aa17.18■□□□□ 0.34
AP003351.1-201ENST00000522743 COL11A2P13942 1736 aaPredicted RBP17.16■□□□□ 0.34
AP003351.1-201ENST00000522743 PRAMEF22A3QJZ6 481 aa17.16■□□□□ 0.34
AP003351.1-201ENST00000522743 PRELPP51888 382 aa17.16■□□□□ 0.34
AP003351.1-201ENST00000522743 HTRA3P83110 453 aa17.16■□□□□ 0.34
AP003351.1-201ENST00000522743 FAM177BA6PVY3 158 aa17.15■□□□□ 0.34
AP003351.1-201ENST00000522743 ANP32CO43423 234 aa17.15■□□□□ 0.34
AP003351.1-201ENST00000522743 FKBP4Q02790 459 aaKnown RBP eCLIP17.15■□□□□ 0.34
AP003351.1-201ENST00000522743 CHADLQ6NUI6 762 aa17.15■□□□□ 0.34
AP003351.1-201ENST00000522743 FER1L6Q2WGJ9 1857 aa17.15■□□□□ 0.34
AP003351.1-201ENST00000522743 CCDC88AQ3V6T2 1871 aa17.15■□□□□ 0.34
AP003351.1-201ENST00000522743 ERVV-1B6SEH8 477 aa17.14■□□□□ 0.33
AP003351.1-201ENST00000522743 NFE2L2Q16236 605 aa17.14■□□□□ 0.33
AP003351.1-201ENST00000522743 TMX4Q9H1E5 349 aaPredicted RBP17.14■□□□□ 0.33
AP003351.1-201ENST00000522743 DICER1Q9UPY3 1922 aaKnown RBP17.13■□□□□ 0.33
AP003351.1-201ENST00000522743 ARFGEF2Q9Y6D5 1785 aa17.13■□□□□ 0.33
AP003351.1-201ENST00000522743 NBPF26B4DH59 902 aa17.13■□□□□ 0.33
AP003351.1-201ENST00000522743 GRIPAP1Q4V328 841 aa17.13■□□□□ 0.33
AP003351.1-201ENST00000522743 NBPF10Q6P3W6 841 aaKnown RBP17.13■□□□□ 0.33
AP003351.1-201ENST00000522743 NGEFQ8N5V2 710 aa17.13■□□□□ 0.33
AP003351.1-201ENST00000522743 NBPF15Q8N660 670 aa17.13■□□□□ 0.33
AP003351.1-201ENST00000522743 RPGRQ92834 1020 aaKnown RBP17.13■□□□□ 0.33
AP003351.1-201ENST00000522743 LAMB4A4D0S4 1761 aa17.12■□□□□ 0.33
AP003351.1-201ENST00000522743 KLRG2A4D1S0 409 aaPredicted RBP17.12■□□□□ 0.33
AP003351.1-201ENST00000522743 LMOD3Q0VAK6 560 aa17.12■□□□□ 0.33
AP003351.1-201ENST00000522743 CC2D2BQ6DHV5 1058 aa17.12■□□□□ 0.33
AP003351.1-201ENST00000522743 ERBB4Q15303 1308 aa17.12■□□□□ 0.33
AP003351.1-201ENST00000522743 MAP3K15Q6ZN16 1313 aa17.12■□□□□ 0.33
AP003351.1-201ENST00000522743 DDNO94850 711 aaPredicted RBP17.11■□□□□ 0.33
AP003351.1-201ENST00000522743 LDHDQ86WU2 507 aa17.11■□□□□ 0.33
AP003351.1-201ENST00000522743 JDP2Q8WYK2 163 aa17.11■□□□□ 0.33
AP003351.1-201ENST00000522743 L3MBTL3Q96JM7 780 aaPredicted RBP17.11■□□□□ 0.33
AP003351.1-201ENST00000522743 CREBZFQ9NS37 354 aa17.11■□□□□ 0.33
AP003351.1-201ENST00000522743 MIS18AQ9NYP9 233 aa17.11■□□□□ 0.33
AP003351.1-201ENST00000522743 RRP7AQ9Y3A4 280 aaKnown RBP17.11■□□□□ 0.33
AP003351.1-201ENST00000522743 SLX4Q8IY92 1834 aa17.11■□□□□ 0.33
AP003351.1-201ENST00000522743 CACNA1SQ13698 1873 aa17.1■□□□□ 0.33
AP003351.1-201ENST00000522743 WDR43Q15061 677 aaKnown RBP eCLIP17.1■□□□□ 0.33
AP003351.1-201ENST00000522743 IBTKQ9P2D0 1353 aaPredicted RBP17.1■□□□□ 0.33
AP003351.1-201ENST00000522743 MYL6BP14649 208 aa17.09■□□□□ 0.33
AP003351.1-201ENST00000522743 EIF4A1P60842 406 aaKnown RBP17.09■□□□□ 0.33
AP003351.1-201ENST00000522743 HLFQ16534 295 aa17.09■□□□□ 0.33
AP003351.1-201ENST00000522743 PPP1R42Q7Z4L9 355 aa17.09■□□□□ 0.33
AP003351.1-201ENST00000522743 C7orf43Q8WVR3 580 aa17.09■□□□□ 0.33
AP003351.1-201ENST00000522743 PLEKHF1Q96S99 279 aa17.09■□□□□ 0.33
AP003351.1-201ENST00000522743 ZNF277Q9NRM2 450 aaPredicted RBP17.09■□□□□ 0.33
AP003351.1-201ENST00000522743 TSPYL4Q9UJ04 414 aa17.09■□□□□ 0.33
AP003351.1-201ENST00000522743 HACL1Q9UJ83 578 aa17.09■□□□□ 0.33
AP003351.1-201ENST00000522743 POTECB2RU33 542 aa17.08■□□□□ 0.32
AP003351.1-201ENST00000522743 IARSP41252 1262 aaKnown RBP17.08■□□□□ 0.32
AP003351.1-201ENST00000522743 EAPPQ56P03 285 aaPredicted RBP17.08■□□□□ 0.32
AP003351.1-201ENST00000522743 PNMA8AQ86V59 439 aaPredicted RBP17.08■□□□□ 0.32
AP003351.1-201ENST00000522743 RBM17Q96I25 401 aaKnown RBP17.08■□□□□ 0.32
AP003351.1-201ENST00000522743 PSMD1Q99460 953 aa17.08■□□□□ 0.32
AP003351.1-201ENST00000522743 LMOD1P29536 600 aaPredicted RBP17.07■□□□□ 0.32
AP003351.1-201ENST00000522743 EIF6P56537 245 aaKnown RBP17.07■□□□□ 0.32
AP003351.1-201ENST00000522743 PARP10Q53GL7 1025 aa17.07■□□□□ 0.32
AP003351.1-201ENST00000522743 TNS4Q8IZW8 715 aa17.07■□□□□ 0.32
AP003351.1-201ENST00000522743 SYNE4Q8N205 404 aa17.07■□□□□ 0.32
AP003351.1-201ENST00000522743 TAF1DQ9H5J8 278 aaPredicted RBP17.07■□□□□ 0.32
AP003351.1-201ENST00000522743 BABAM1Q9NWV8 329 aa17.07■□□□□ 0.32
AP003351.1-201ENST00000522743 CLEC11AQ9Y240 323 aa17.07■□□□□ 0.32
AP003351.1-201ENST00000522743 RIC1Q4ADV7 1423 aa17.06■□□□□ 0.32
AP003351.1-201ENST00000522743 SCN4AP35499 1836 aa17.06■□□□□ 0.32
AP003351.1-201ENST00000522743 HSPA1AP0DMV8 641 aaKnown RBP17.06■□□□□ 0.32
AP003351.1-201ENST00000522743 HSPA1BP0DMV9 641 aaKnown RBP17.06■□□□□ 0.32
AP003351.1-201ENST00000522743 CRY2Q49AN0 593 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms