RNA–Protein interactions for RNA: ENST00000521569.1

SPARC-204, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 602 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-204ENST00000521569 ZNF652Q9Y2D9 606 aa11.42□□□□□ -0.58
SPARC-204ENST00000521569 USP16Q9Y5T5 823 aa11.42□□□□□ -0.58
SPARC-204ENST00000521569 PASKQ96RG2 1323 aa11.41□□□□□ -0.58
SPARC-204ENST00000521569 KCNQ3O43525 872 aa11.41□□□□□ -0.58
SPARC-204ENST00000521569 TPTE2Q6XPS3 522 aa11.41□□□□□ -0.58
SPARC-204ENST00000521569 LDHDQ86WU2 507 aa11.41□□□□□ -0.58
SPARC-204ENST00000521569 RTKN2Q8IZC4 609 aa11.41□□□□□ -0.58
SPARC-204ENST00000521569 CFAP53Q96M91 514 aa11.41□□□□□ -0.58
SPARC-204ENST00000521569 NUDCQ9Y266 331 aa11.41□□□□□ -0.58
SPARC-204ENST00000521569 SCN7AQ01118 1682 aa11.4□□□□□ -0.58
SPARC-204ENST00000521569 HSPA1AP0DMV8 641 aaKnown RBP11.4□□□□□ -0.58
SPARC-204ENST00000521569 HSPA1BP0DMV9 641 aaKnown RBP11.4□□□□□ -0.58
SPARC-204ENST00000521569 PRKAR2BP31323 418 aa11.4□□□□□ -0.58
SPARC-204ENST00000521569 CRY2Q49AN0 593 aa11.4□□□□□ -0.58
SPARC-204ENST00000521569 GRIPAP1Q4V328 841 aa11.4□□□□□ -0.58
SPARC-204ENST00000521569 CCDC93Q567U6 631 aa11.4□□□□□ -0.58
SPARC-204ENST00000521569 NBPF5PQ86XG9 351 aaPredicted RBP11.4□□□□□ -0.58
SPARC-204ENST00000521569 TNS4Q8IZW8 715 aa11.4□□□□□ -0.58
SPARC-204ENST00000521569 ERVV-1B6SEH8 477 aa11.39□□□□□ -0.59
SPARC-204ENST00000521569 FZD9O00144 591 aa11.39□□□□□ -0.59
SPARC-204ENST00000521569 DDNO94850 711 aaPredicted RBP11.39□□□□□ -0.59
SPARC-204ENST00000521569 ALDH1B1P30837 517 aa11.39□□□□□ -0.59
SPARC-204ENST00000521569 FKBP4Q02790 459 aaKnown RBP eCLIP11.39□□□□□ -0.59
SPARC-204ENST00000521569 TAF1DQ9H5J8 278 aaPredicted RBP11.39□□□□□ -0.59
SPARC-204ENST00000521569 SIPA1L3O60292 1781 aaPredicted RBP11.39□□□□□ -0.59
SPARC-204ENST00000521569 NBPF26B4DH59 902 aa11.38□□□□□ -0.59
SPARC-204ENST00000521569 ITGBL1O95965 494 aaPredicted RBP11.38□□□□□ -0.59
SPARC-204ENST00000521569 TAF7Q15545 349 aaPredicted RBP11.38□□□□□ -0.59
SPARC-204ENST00000521569 CC2D2BQ6DHV5 1058 aa11.38□□□□□ -0.59
SPARC-204ENST00000521569 NBPF10Q6P3W6 841 aaKnown RBP11.38□□□□□ -0.59
SPARC-204ENST00000521569 NBPF15Q8N660 670 aa11.38□□□□□ -0.59
SPARC-204ENST00000521569 RTF1Q92541 710 aaKnown RBP11.38□□□□□ -0.59
SPARC-204ENST00000521569 PSMD1Q99460 953 aa11.38□□□□□ -0.59
SPARC-204ENST00000521569 CNTNAP1P78357 1384 aa11.38□□□□□ -0.59
SPARC-204ENST00000521569 FER1L6Q2WGJ9 1857 aa11.38□□□□□ -0.59
SPARC-204ENST00000521569 RIC1Q4ADV7 1423 aa11.37□□□□□ -0.59
SPARC-204ENST00000521569 SNED1Q8TER0 1413 aa11.37□□□□□ -0.59
SPARC-204ENST00000521569 HOXA10P31260 410 aaPredicted RBP11.37□□□□□ -0.59
SPARC-204ENST00000521569 PNMA8AQ86V59 439 aaPredicted RBP11.37□□□□□ -0.59
SPARC-204ENST00000521569 PRDM10Q9NQV6 1147 aa11.37□□□□□ -0.59
SPARC-204ENST00000521569 ZNF330Q9Y3S2 320 aaPredicted RBP11.37□□□□□ -0.59
SPARC-204ENST00000521569 ANKRD31Q8N7Z5 1873 aa11.37□□□□□ -0.59
SPARC-204ENST00000521569 PRAMEF22A3QJZ6 481 aa11.36□□□□□ -0.59
SPARC-204ENST00000521569 NPHP1O15259 732 aa11.36□□□□□ -0.59
SPARC-204ENST00000521569 GPC2Q8N158 579 aa11.36□□□□□ -0.59
SPARC-204ENST00000521569 CCDC24Q8N4L8 307 aa11.36□□□□□ -0.59
SPARC-204ENST00000521569 PNISRQ8TF01 805 aaKnown RBP11.36□□□□□ -0.59
SPARC-204ENST00000521569 NYXQ9GZU5 481 aa11.36□□□□□ -0.59
SPARC-204ENST00000521569 NIP7Q9Y221 180 aaKnown RBP eCLIP11.36□□□□□ -0.59
SPARC-204ENST00000521569 IBTKQ9P2D0 1353 aaPredicted RBP11.36□□□□□ -0.59
SPARC-204ENST00000521569 TMEM88BA6NKF7 163 aa11.35□□□□□ -0.59
SPARC-204ENST00000521569 POTEIP0CG38 1075 aa11.35□□□□□ -0.59
SPARC-204ENST00000521569 POTEJP0CG39 1038 aa11.35□□□□□ -0.59
SPARC-204ENST00000521569 U2AF1L5P0DN76 240 aaPredicted RBP11.35□□□□□ -0.59
SPARC-204ENST00000521569 PPP2R1AP30153 589 aa11.35□□□□□ -0.59
SPARC-204ENST00000521569 U2AF1Q01081 240 aaKnown RBP eCLIP11.35□□□□□ -0.59
SPARC-204ENST00000521569 MCM10Q7L590 875 aa11.35□□□□□ -0.59
SPARC-204ENST00000521569 VPS33BQ9H267 617 aa11.35□□□□□ -0.59
SPARC-204ENST00000521569 HACL1Q9UJ83 578 aa11.35□□□□□ -0.59
SPARC-204ENST00000521569 TIAM2Q8IVF5 1701 aa11.35□□□□□ -0.59
SPARC-204ENST00000521569 RASSF10A6NK89 507 aa11.34□□□□□ -0.59
SPARC-204ENST00000521569 WBP1LQ9NX94 342 aa11.34□□□□□ -0.59
SPARC-204ENST00000521569 ZNF219Q9P2Y4 722 aaPredicted RBP11.34□□□□□ -0.59
SPARC-204ENST00000521569 DICER1Q9UPY3 1922 aaKnown RBP11.34□□□□□ -0.59
SPARC-204ENST00000521569 COL11A2P13942 1736 aaPredicted RBP11.34□□□□□ -0.59
SPARC-204ENST00000521569 ERBB4Q15303 1308 aa11.34□□□□□ -0.59
SPARC-204ENST00000521569 SLX4Q8IY92 1834 aa11.33□□□□□ -0.6
SPARC-204ENST00000521569 EPHX2P34913 555 aa11.33□□□□□ -0.6
SPARC-204ENST00000521569 IARSP41252 1262 aaKnown RBP11.33□□□□□ -0.6
SPARC-204ENST00000521569 HLFQ16534 295 aa11.33□□□□□ -0.6
SPARC-204ENST00000521569 SYNE4Q8N205 404 aa11.33□□□□□ -0.6
SPARC-204ENST00000521569 PLEKHF1Q96S99 279 aa11.33□□□□□ -0.6
SPARC-204ENST00000521569 ZNF277Q9NRM2 450 aaPredicted RBP11.33□□□□□ -0.6
SPARC-204ENST00000521569 BCORQ6W2J9 1755 aa11.33□□□□□ -0.6
SPARC-204ENST00000521569 MAP3K15Q6ZN16 1313 aa11.33□□□□□ -0.6
SPARC-204ENST00000521569 ZNF541Q9H0D2 1346 aa11.33□□□□□ -0.6
SPARC-204ENST00000521569 ARFGEF2Q9Y6D5 1785 aa11.32□□□□□ -0.6
SPARC-204ENST00000521569 CTCFP49711 727 aaPredicted RBP11.32□□□□□ -0.6
SPARC-204ENST00000521569 VEGFBP49765 207 aa11.32□□□□□ -0.6
SPARC-204ENST00000521569 EIF4A1P60842 406 aaKnown RBP11.32□□□□□ -0.6
SPARC-204ENST00000521569 ZNF34Q8IZ26 560 aa11.32□□□□□ -0.6
SPARC-204ENST00000521569 JDP2Q8WYK2 163 aa11.32□□□□□ -0.6
SPARC-204ENST00000521569 CRAMP1Q96RY5 1269 aa11.32□□□□□ -0.6
SPARC-204ENST00000521569 BABAM1Q9NWV8 329 aa11.32□□□□□ -0.6
SPARC-204ENST00000521569 SCN4AP35499 1836 aa11.32□□□□□ -0.6
SPARC-204ENST00000521569 VIRMAQ69YN4 1812 aaKnown RBP11.31□□□□□ -0.6
SPARC-204ENST00000521569 PIP4K2AP48426 406 aaPredicted RBP11.31□□□□□ -0.6
SPARC-204ENST00000521569 SLC10A5Q5PT55 438 aa11.31□□□□□ -0.6
SPARC-204ENST00000521569 CNTROBQ8N137 903 aa11.31□□□□□ -0.6
SPARC-204ENST00000521569 MKRN1Q9UHC7 482 aaKnown RBP11.31□□□□□ -0.6
SPARC-204ENST00000521569 FOXN1O15353 648 aa11.3□□□□□ -0.6
SPARC-204ENST00000521569 DCTN1Q14203 1278 aa11.3□□□□□ -0.6
SPARC-204ENST00000521569 PNNQ9H307 717 aaKnown RBP11.3□□□□□ -0.6
SPARC-204ENST00000521569 ADAMTSL1Q8N6G6 1762 aa11.3□□□□□ -0.6
SPARC-204ENST00000521569 RNF123Q5XPI4 1314 aa11.3□□□□□ -0.6
SPARC-204ENST00000521569 GTF2E1P29083 439 aaPredicted RBP11.29□□□□□ -0.6
SPARC-204ENST00000521569 MAP2K1Q02750 393 aaPredicted RBP11.29□□□□□ -0.6
SPARC-204ENST00000521569 PARP10Q53GL7 1025 aa11.29□□□□□ -0.6
SPARC-204ENST00000521569 OLFM4Q6UX06 510 aa11.29□□□□□ -0.6
SPARC-204ENST00000521569 GIGYF2Q6Y7W6 1299 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms