RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 DLEC1Q9Y238 1755 aa15.41■□□□□ 0.06
MRPS28-206ENST00000520946 KIF7Q2M1P5 1343 aa15.41■□□□□ 0.06
MRPS28-206ENST00000520946 LTBP3Q9NS15 1303 aa15.41■□□□□ 0.06
MRPS28-206ENST00000520946 SRGNP10124 158 aa15.4■□□□□ 0.06
MRPS28-206ENST00000520946 CCDC93Q567U6 631 aa15.4■□□□□ 0.06
MRPS28-206ENST00000520946 CAMTA2O94983 1202 aa15.39■□□□□ 0.05
MRPS28-206ENST00000520946 TPTE2Q6XPS3 522 aa15.39■□□□□ 0.05
MRPS28-206ENST00000520946 LDHDQ86WU2 507 aa15.39■□□□□ 0.05
MRPS28-206ENST00000520946 NUDCQ9Y266 331 aa15.39■□□□□ 0.05
MRPS28-206ENST00000520946 VIRMAQ69YN4 1812 aaKnown RBP15.38■□□□□ 0.05
MRPS28-206ENST00000520946 FAM177BA6PVY3 158 aa15.38■□□□□ 0.05
MRPS28-206ENST00000520946 NPR1P16066 1061 aa15.38■□□□□ 0.05
MRPS28-206ENST00000520946 POTEIP0CG38 1075 aa15.37■□□□□ 0.05
MRPS28-206ENST00000520946 POTEJP0CG39 1038 aa15.37■□□□□ 0.05
MRPS28-206ENST00000520946 PRKAR2BP31323 418 aa15.37■□□□□ 0.05
MRPS28-206ENST00000520946 PIP4K2AP48426 406 aaPredicted RBP15.37■□□□□ 0.05
MRPS28-206ENST00000520946 CLEC4GQ6UXB4 293 aa15.37■□□□□ 0.05
MRPS28-206ENST00000520946 RTKN2Q8IZC4 609 aa15.37■□□□□ 0.05
MRPS28-206ENST00000520946 TMEM88BA6NKF7 163 aa15.36■□□□□ 0.05
MRPS28-206ENST00000520946 SNRPA1P09661 255 aaKnown RBP15.36■□□□□ 0.05
MRPS28-206ENST00000520946 TAF1DQ9H5J8 278 aaPredicted RBP15.36■□□□□ 0.05
MRPS28-206ENST00000520946 HACL1Q9UJ83 578 aa15.36■□□□□ 0.05
MRPS28-206ENST00000520946 NIP7Q9Y221 180 aaKnown RBP eCLIP15.36■□□□□ 0.05
MRPS28-206ENST00000520946 USP16Q9Y5T5 823 aa15.36■□□□□ 0.05
MRPS28-206ENST00000520946 UBR2Q8IWV8 1755 aa15.35■□□□□ 0.05
MRPS28-206ENST00000520946 PER1O15534 1290 aaPredicted RBP15.35■□□□□ 0.05
MRPS28-206ENST00000520946 KCNQ3O43525 872 aa15.35■□□□□ 0.05
MRPS28-206ENST00000520946 ALDH1B1P30837 517 aa15.35■□□□□ 0.05
MRPS28-206ENST00000520946 FKBP4Q02790 459 aaKnown RBP eCLIP15.35■□□□□ 0.05
MRPS28-206ENST00000520946 ZNF277Q9NRM2 450 aaPredicted RBP15.35■□□□□ 0.05
MRPS28-206ENST00000520946 NEFMP07197 916 aa15.34■□□□□ 0.05
MRPS28-206ENST00000520946 U2AF1L5P0DN76 240 aaPredicted RBP15.34■□□□□ 0.05
MRPS28-206ENST00000520946 CTCFP49711 727 aaPredicted RBP15.34■□□□□ 0.05
MRPS28-206ENST00000520946 U2AF1Q01081 240 aaKnown RBP eCLIP15.34■□□□□ 0.05
MRPS28-206ENST00000520946 PNMA8AQ86V59 439 aaPredicted RBP15.34■□□□□ 0.05
MRPS28-206ENST00000520946 JDP2Q8WYK2 163 aa15.34■□□□□ 0.05
MRPS28-206ENST00000520946 DICER1Q9UPY3 1922 aaKnown RBP15.34■□□□□ 0.05
MRPS28-206ENST00000520946 FER1L6Q2WGJ9 1857 aa15.33■□□□□ 0.05
MRPS28-206ENST00000520946 ANKRD31Q8N7Z5 1873 aa15.33■□□□□ 0.05
MRPS28-206ENST00000520946 SCN7AQ01118 1682 aa15.33■□□□□ 0.04
MRPS28-206ENST00000520946 FOXN1O15353 648 aa15.33■□□□□ 0.04
MRPS28-206ENST00000520946 EPHX2P34913 555 aa15.33■□□□□ 0.04
MRPS28-206ENST00000520946 L3MBTL3Q96JM7 780 aaPredicted RBP15.33■□□□□ 0.04
MRPS28-206ENST00000520946 PHACTR3Q96KR7 559 aa15.33■□□□□ 0.04
MRPS28-206ENST00000520946 SLX4Q8IY92 1834 aa15.33■□□□□ 0.04
MRPS28-206ENST00000520946 CNTNAP1P78357 1384 aa15.33■□□□□ 0.04
MRPS28-206ENST00000520946 LMOD1P29536 600 aaPredicted RBP15.32■□□□□ 0.04
MRPS28-206ENST00000520946 PAXIP1Q6ZW49 1069 aaPredicted RBP15.32■□□□□ 0.04
MRPS28-206ENST00000520946 MCM10Q7L590 875 aa15.32■□□□□ 0.04
MRPS28-206ENST00000520946 TMX4Q9H1E5 349 aaPredicted RBP15.32■□□□□ 0.04
MRPS28-206ENST00000520946 PRDM10Q9NQV6 1147 aa15.32■□□□□ 0.04
MRPS28-206ENST00000520946 ABT1Q9ULW3 272 aaKnown RBP15.32■□□□□ 0.04
MRPS28-206ENST00000520946 IARSP41252 1262 aaKnown RBP15.31■□□□□ 0.04
MRPS28-206ENST00000520946 VEGFBP49765 207 aa15.31■□□□□ 0.04
MRPS28-206ENST00000520946 EIF6P56537 245 aaKnown RBP15.31■□□□□ 0.04
MRPS28-206ENST00000520946 SYNE4Q8N205 404 aa15.31■□□□□ 0.04
MRPS28-206ENST00000520946 NGEFQ8N5V2 710 aa15.31■□□□□ 0.04
MRPS28-206ENST00000520946 GJA3Q9Y6H8 435 aa15.31■□□□□ 0.04
MRPS28-206ENST00000520946 COL11A2P13942 1736 aaPredicted RBP15.31■□□□□ 0.04
MRPS28-206ENST00000520946 CACNA1SQ13698 1873 aa15.31■□□□□ 0.04
MRPS28-206ENST00000520946 PRAMEF22A3QJZ6 481 aa15.3■□□□□ 0.04
MRPS28-206ENST00000520946 DEFB115Q30KQ5 88 aa15.3■□□□□ 0.04
MRPS28-206ENST00000520946 CNTROBQ8N137 903 aa15.3■□□□□ 0.04
MRPS28-206ENST00000520946 CEMIPQ8WUJ3 1361 aa15.3■□□□□ 0.04
MRPS28-206ENST00000520946 C7orf43Q8WVR3 580 aa15.3■□□□□ 0.04
MRPS28-206ENST00000520946 RPGRQ92834 1020 aaKnown RBP15.3■□□□□ 0.04
MRPS28-206ENST00000520946 PASKQ96RG2 1323 aa15.3■□□□□ 0.04
MRPS28-206ENST00000520946 BEGAINQ9BUH8 593 aa15.3■□□□□ 0.04
MRPS28-206ENST00000520946 NYXQ9GZU5 481 aa15.3■□□□□ 0.04
MRPS28-206ENST00000520946 ZNF541Q9H0D2 1346 aa15.3■□□□□ 0.04
MRPS28-206ENST00000520946 RSPH6AQ9H0K4 717 aa15.3■□□□□ 0.04
MRPS28-206ENST00000520946 NPC1L1Q9UHC9 1359 aa15.29■□□□□ 0.04
MRPS28-206ENST00000520946 RNF123Q5XPI4 1314 aa15.29■□□□□ 0.04
MRPS28-206ENST00000520946 MAP1SQ66K74 1059 aaPredicted RBP15.29■□□□□ 0.04
MRPS28-206ENST00000520946 RGL2O15211 777 aa15.28■□□□□ 0.04
MRPS28-206ENST00000520946 ITGBL1O95965 494 aaPredicted RBP15.28■□□□□ 0.04
MRPS28-206ENST00000520946 LBX1P52954 281 aa15.28■□□□□ 0.04
MRPS28-206ENST00000520946 MAP2K1Q02750 393 aaPredicted RBP15.28■□□□□ 0.04
MRPS28-206ENST00000520946 TAF7Q15545 349 aaPredicted RBP15.28■□□□□ 0.04
MRPS28-206ENST00000520946 CC2D2BQ6DHV5 1058 aa15.28■□□□□ 0.04
MRPS28-206ENST00000520946 OLFM4Q6UX06 510 aa15.28■□□□□ 0.04
MRPS28-206ENST00000520946 KIF6Q6ZMV9 814 aa15.28■□□□□ 0.04
MRPS28-206ENST00000520946 GPC2Q8N158 579 aa15.28■□□□□ 0.04
MRPS28-206ENST00000520946 SCN4AP35499 1836 aa15.28■□□□□ 0.04
MRPS28-206ENST00000520946 KLRG2A4D1S0 409 aaPredicted RBP15.27■□□□□ 0.04
MRPS28-206ENST00000520946 HTATSF1O43719 755 aaKnown RBP15.27■□□□□ 0.04
MRPS28-206ENST00000520946 GRM1Q13255 1194 aa15.27■□□□□ 0.04
MRPS28-206ENST00000520946 DCTN1Q14203 1278 aa15.27■□□□□ 0.04
MRPS28-206ENST00000520946 COL3A1P02461 1466 aaPredicted RBP15.27■□□□□ 0.03
MRPS28-206ENST00000520946 FZD9O00144 591 aa15.26■□□□□ 0.03
MRPS28-206ENST00000520946 LARGE2Q8N3Y3 721 aa15.26■□□□□ 0.03
MRPS28-206ENST00000520946 WBP1LQ9NX94 342 aa15.26■□□□□ 0.03
MRPS28-206ENST00000520946 RRP7AQ9Y3A4 280 aaKnown RBP15.26■□□□□ 0.03
MRPS28-206ENST00000520946 WDR33Q9C0J8 1336 aaKnown RBP15.25■□□□□ 0.03
MRPS28-206ENST00000520946 NBPF26B4DH59 902 aa15.25■□□□□ 0.03
MRPS28-206ENST00000520946 TCERG1O14776 1098 aaKnown RBP15.25■□□□□ 0.03
MRPS28-206ENST00000520946 HLFQ16534 295 aa15.25■□□□□ 0.03
MRPS28-206ENST00000520946 GRIPAP1Q4V328 841 aa15.25■□□□□ 0.03
MRPS28-206ENST00000520946 NBPF10Q6P3W6 841 aaKnown RBP15.25■□□□□ 0.03
MRPS28-206ENST00000520946 NUTM1Q86Y26 1132 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms