RNA–Protein interactions for RNA: ENST00000520709.5

TMEM55A-205, humanhuman

TSL 3

Gene TMEM55A, Length 649 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-205ENST00000520709 SRGNP10124 158 aa18.08■□□□□ 0.48
TMEM55A-205ENST00000520709 PIP4K2AP48426 406 aaPredicted RBP18.08■□□□□ 0.48
TMEM55A-205ENST00000520709 JMYQ8N9B5 988 aa18.08■□□□□ 0.48
TMEM55A-205ENST00000520709 SMC1BQ8NDV3 1235 aa18.08■□□□□ 0.48
TMEM55A-205ENST00000520709 ZNF622Q969S3 477 aaKnown RBP eCLIP18.08■□□□□ 0.48
TMEM55A-205ENST00000520709 KLRG1Q96E93 195 aa18.08■□□□□ 0.48
TMEM55A-205ENST00000520709 SETDB2Q96T68 719 aa18.08■□□□□ 0.48
TMEM55A-205ENST00000520709 POTECB2RU33 542 aa18.07■□□□□ 0.48
TMEM55A-205ENST00000520709 NBPF26B4DH59 902 aa18.07■□□□□ 0.48
TMEM55A-205ENST00000520709 RGL2O15211 777 aa18.07■□□□□ 0.48
TMEM55A-205ENST00000520709 HTATSF1O43719 755 aaKnown RBP18.07■□□□□ 0.48
TMEM55A-205ENST00000520709 C21orf2O43822 256 aa18.07■□□□□ 0.48
TMEM55A-205ENST00000520709 SNRPA1P09661 255 aaKnown RBP18.07■□□□□ 0.48
TMEM55A-205ENST00000520709 STYK1Q6J9G0 422 aa18.07■□□□□ 0.48
TMEM55A-205ENST00000520709 NBPF10Q6P3W6 841 aaKnown RBP18.07■□□□□ 0.48
TMEM55A-205ENST00000520709 CLEC4GQ6UXB4 293 aa18.07■□□□□ 0.48
TMEM55A-205ENST00000520709 NBPF15Q8N660 670 aa18.07■□□□□ 0.48
TMEM55A-205ENST00000520709 VEGFAP15692 232 aaPredicted RBP18.06■□□□□ 0.48
TMEM55A-205ENST00000520709 ST5P78524 1137 aa18.06■□□□□ 0.48
TMEM55A-205ENST00000520709 DCTN1Q14203 1278 aa18.06■□□□□ 0.48
TMEM55A-205ENST00000520709 ADAMTSL1Q8N6G6 1762 aa18.05■□□□□ 0.48
TMEM55A-205ENST00000520709 PRPF40BQ6NWY9 871 aaKnown RBP18.05■□□□□ 0.48
TMEM55A-205ENST00000520709 RTF1Q92541 710 aaKnown RBP18.05■□□□□ 0.48
TMEM55A-205ENST00000520709 CNKSR1Q969H4 720 aa18.05■□□□□ 0.48
TMEM55A-205ENST00000520709 ANKRD36CQ5JPF3 1778 aa18.04■□□□□ 0.48
TMEM55A-205ENST00000520709 NPM2Q86SE8 214 aaKnown RBP18.04■□□□□ 0.48
TMEM55A-205ENST00000520709 MASTLQ96GX5 879 aa18.04■□□□□ 0.48
TMEM55A-205ENST00000520709 SNED1Q8TER0 1413 aa18.04■□□□□ 0.48
TMEM55A-205ENST00000520709 KLRG2A4D1S0 409 aaPredicted RBP18.03■□□□□ 0.48
TMEM55A-205ENST00000520709 C7orf43Q8WVR3 580 aa18.03■□□□□ 0.48
TMEM55A-205ENST00000520709 TAOK3Q9H2K8 898 aa18.03■□□□□ 0.48
TMEM55A-205ENST00000520709 ZNF219Q9P2Y4 722 aaPredicted RBP18.03■□□□□ 0.48
TMEM55A-205ENST00000520709 ERFEQ4G0M1 354 aa18.02■□□□□ 0.48
TMEM55A-205ENST00000520709 ZNF652Q9Y2D9 606 aa18.02■□□□□ 0.48
TMEM55A-205ENST00000520709 TAF7Q15545 349 aaPredicted RBP18.01■□□□□ 0.47
TMEM55A-205ENST00000520709 SOGA3Q5TF21 947 aa18.01■□□□□ 0.47
TMEM55A-205ENST00000520709 NBPF5PQ86XG9 351 aaPredicted RBP18.01■□□□□ 0.47
TMEM55A-205ENST00000520709 PLEKHF1Q96S99 279 aa18.01■□□□□ 0.47
TMEM55A-205ENST00000520709 LAMB2P55268 1798 aa18.01■□□□□ 0.47
TMEM55A-205ENST00000520709 RIC1Q4ADV7 1423 aa18■□□□□ 0.47
TMEM55A-205ENST00000520709 NPHP1O15259 732 aa17.99■□□□□ 0.47
TMEM55A-205ENST00000520709 NPR1P16066 1061 aa17.99■□□□□ 0.47
TMEM55A-205ENST00000520709 DPY19L2Q6NUT2 758 aa17.99■□□□□ 0.47
TMEM55A-205ENST00000520709 ABCC12Q96J65 1359 aa17.99■□□□□ 0.47
TMEM55A-205ENST00000520709 HLFQ16534 295 aa17.98■□□□□ 0.47
TMEM55A-205ENST00000520709 NIP7Q9Y221 180 aaKnown RBP eCLIP17.98■□□□□ 0.47
TMEM55A-205ENST00000520709 IBTKQ9P2D0 1353 aaPredicted RBP17.98■□□□□ 0.47
TMEM55A-205ENST00000520709 CCDC93Q567U6 631 aa17.97■□□□□ 0.47
TMEM55A-205ENST00000520709 MIS18AQ9NYP9 233 aa17.97■□□□□ 0.47
TMEM55A-205ENST00000520709 DDNO94850 711 aaPredicted RBP17.96■□□□□ 0.47
TMEM55A-205ENST00000520709 TPTE2Q6XPS3 522 aa17.96■□□□□ 0.47
TMEM55A-205ENST00000520709 PNISRQ8TF01 805 aaKnown RBP17.96■□□□□ 0.47
TMEM55A-205ENST00000520709 L3MBTL3Q96JM7 780 aaPredicted RBP17.96■□□□□ 0.47
TMEM55A-205ENST00000520709 COL4A5P29400 1685 aa17.96■□□□□ 0.47
TMEM55A-205ENST00000520709 EIF4A1P60842 406 aaKnown RBP17.95■□□□□ 0.46
TMEM55A-205ENST00000520709 FKBP4Q02790 459 aaKnown RBP eCLIP17.95■□□□□ 0.46
TMEM55A-205ENST00000520709 NFE2L2Q16236 605 aa17.95■□□□□ 0.46
TMEM55A-205ENST00000520709 MAP3K15Q6ZN16 1313 aa17.95■□□□□ 0.46
TMEM55A-205ENST00000520709 LTBP1Q14766 1721 aa17.95■□□□□ 0.46
TMEM55A-205ENST00000520709 ERVV-1B6SEH8 477 aa17.94■□□□□ 0.46
TMEM55A-205ENST00000520709 POTEIP0CG38 1075 aa17.94■□□□□ 0.46
TMEM55A-205ENST00000520709 POTEJP0CG39 1038 aa17.94■□□□□ 0.46
TMEM55A-205ENST00000520709 CRY2Q49AN0 593 aa17.94■□□□□ 0.46
TMEM55A-205ENST00000520709 CHADLQ6NUI6 762 aa17.93■□□□□ 0.46
TMEM55A-205ENST00000520709 OLFM4Q6UX06 510 aa17.93■□□□□ 0.46
TMEM55A-205ENST00000520709 THUMPD2Q9BTF0 503 aaKnown RBP17.93■□□□□ 0.46
TMEM55A-205ENST00000520709 UBN2Q6ZU65 1347 aa17.93■□□□□ 0.46
TMEM55A-205ENST00000520709 ZNF541Q9H0D2 1346 aa17.93■□□□□ 0.46
TMEM55A-205ENST00000520709 TTLL7Q6ZT98 887 aa17.92■□□□□ 0.46
TMEM55A-205ENST00000520709 FAM177BA6PVY3 158 aa17.91■□□□□ 0.46
TMEM55A-205ENST00000520709 NEFMP07197 916 aa17.91■□□□□ 0.46
TMEM55A-205ENST00000520709 COL13A1Q5TAT6 717 aaPredicted RBP17.91■□□□□ 0.46
TMEM55A-205ENST00000520709 LRP10Q7Z4F1 713 aa17.91■□□□□ 0.46
TMEM55A-205ENST00000520709 ZNF277Q9NRM2 450 aaPredicted RBP17.91■□□□□ 0.46
TMEM55A-205ENST00000520709 ERBB4Q15303 1308 aa17.91■□□□□ 0.46
TMEM55A-205ENST00000520709 TRPM7Q96QT4 1865 aa17.9■□□□□ 0.46
TMEM55A-205ENST00000520709 RTKN2Q8IZC4 609 aa17.9■□□□□ 0.46
TMEM55A-205ENST00000520709 NYXQ9GZU5 481 aa17.9■□□□□ 0.46
TMEM55A-205ENST00000520709 TAF1DQ9H5J8 278 aaPredicted RBP17.9■□□□□ 0.46
TMEM55A-205ENST00000520709 CREBZFQ9NS37 354 aa17.9■□□□□ 0.46
TMEM55A-205ENST00000520709 PASKQ96RG2 1323 aa17.9■□□□□ 0.46
TMEM55A-205ENST00000520709 DDX60Q8IY21 1712 aaKnown RBP17.89■□□□□ 0.46
TMEM55A-205ENST00000520709 TAF1P21675 1872 aa17.89■□□□□ 0.45
TMEM55A-205ENST00000520709 IQCA1LA6NCM1 817 aa17.89■□□□□ 0.45
TMEM55A-205ENST00000520709 ALDH1B1P30837 517 aa17.89■□□□□ 0.45
TMEM55A-205ENST00000520709 NUTM1Q86Y26 1132 aa17.89■□□□□ 0.45
TMEM55A-205ENST00000520709 PSMD1Q99460 953 aa17.89■□□□□ 0.45
TMEM55A-205ENST00000520709 LRRC37AA6NMS7 1700 aa17.89■□□□□ 0.45
TMEM55A-205ENST00000520709 FZD9O00144 591 aa17.88■□□□□ 0.45
TMEM55A-205ENST00000520709 NTSR2O95665 410 aa17.88■□□□□ 0.45
TMEM55A-205ENST00000520709 HSPA1AP0DMV8 641 aaKnown RBP17.88■□□□□ 0.45
TMEM55A-205ENST00000520709 HSPA1BP0DMV9 641 aaKnown RBP17.88■□□□□ 0.45
TMEM55A-205ENST00000520709 HOXA10P31260 410 aaPredicted RBP17.88■□□□□ 0.45
TMEM55A-205ENST00000520709 IARSP41252 1262 aaKnown RBP17.88■□□□□ 0.45
TMEM55A-205ENST00000520709 KIF6Q6ZMV9 814 aa17.88■□□□□ 0.45
TMEM55A-205ENST00000520709 LDHDQ86WU2 507 aa17.88■□□□□ 0.45
TMEM55A-205ENST00000520709 NGEFQ8N5V2 710 aa17.88■□□□□ 0.45
TMEM55A-205ENST00000520709 MAPK8IP3Q9UPT6 1336 aa17.88■□□□□ 0.45
TMEM55A-205ENST00000520709 THSD7BQ9C0I4 1608 aa17.87■□□□□ 0.45
TMEM55A-205ENST00000520709 MYL6BP14649 208 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms