RNA–Protein interactions for RNA: ENST00000520642.5

ERGIC1-209, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 4

Gene ERGIC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-209ENST00000520642 ERFEQ4G0M1 354 aa20.42■□□□□ 0.86
ERGIC1-209ENST00000520642 TAOK3Q9H2K8 898 aa20.42■□□□□ 0.86
ERGIC1-209ENST00000520642 TBC1D2BQ9UPU7 963 aa20.42■□□□□ 0.86
ERGIC1-209ENST00000520642 LTBP3Q9NS15 1303 aa20.42■□□□□ 0.86
ERGIC1-209ENST00000520642 DICER1Q9UPY3 1922 aaKnown RBP20.41■□□□□ 0.86
ERGIC1-209ENST00000520642 PRELPP51888 382 aa20.41■□□□□ 0.86
ERGIC1-209ENST00000520642 TAF7Q15545 349 aaPredicted RBP20.41■□□□□ 0.86
ERGIC1-209ENST00000520642 PLEKHF1Q96S99 279 aa20.41■□□□□ 0.86
ERGIC1-209ENST00000520642 ZNF652Q9Y2D9 606 aa20.41■□□□□ 0.86
ERGIC1-209ENST00000520642 COL11A2P13942 1736 aaPredicted RBP20.41■□□□□ 0.86
ERGIC1-209ENST00000520642 FER1L6Q2WGJ9 1857 aa20.41■□□□□ 0.86
ERGIC1-209ENST00000520642 KCNQ3O43525 872 aa20.4■□□□□ 0.86
ERGIC1-209ENST00000520642 C21orf2O43822 256 aa20.4■□□□□ 0.86
ERGIC1-209ENST00000520642 WDR43Q15061 677 aaKnown RBP eCLIP20.4■□□□□ 0.86
ERGIC1-209ENST00000520642 STYK1Q6J9G0 422 aa20.4■□□□□ 0.86
ERGIC1-209ENST00000520642 BCORQ6W2J9 1755 aa20.39■□□□□ 0.86
ERGIC1-209ENST00000520642 DZIP3Q86Y13 1208 aaKnown RBP20.39■□□□□ 0.85
ERGIC1-209ENST00000520642 PNISRQ8TF01 805 aaKnown RBP20.39■□□□□ 0.85
ERGIC1-209ENST00000520642 CAMTA2O94983 1202 aa20.38■□□□□ 0.85
ERGIC1-209ENST00000520642 SNRPA1P09661 255 aaKnown RBP20.38■□□□□ 0.85
ERGIC1-209ENST00000520642 CLEC4GQ6UXB4 293 aa20.38■□□□□ 0.85
ERGIC1-209ENST00000520642 MASTLQ96GX5 879 aa20.38■□□□□ 0.85
ERGIC1-209ENST00000520642 ARFGEF2Q9Y6D5 1785 aa20.37■□□□□ 0.85
ERGIC1-209ENST00000520642 A1BGP04217 495 aa20.37■□□□□ 0.85
ERGIC1-209ENST00000520642 ZNF219Q9P2Y4 722 aaPredicted RBP20.37■□□□□ 0.85
ERGIC1-209ENST00000520642 RGL2O15211 777 aa20.36■□□□□ 0.85
ERGIC1-209ENST00000520642 SRGNP10124 158 aa20.36■□□□□ 0.85
ERGIC1-209ENST00000520642 PRPF40BQ6NWY9 871 aaKnown RBP20.36■□□□□ 0.85
ERGIC1-209ENST00000520642 DLG5Q8TDM6 1919 aa20.35■□□□□ 0.85
ERGIC1-209ENST00000520642 IQCA1LA6NCM1 817 aa20.35■□□□□ 0.85
ERGIC1-209ENST00000520642 NBPF5PQ86XG9 351 aaPredicted RBP20.35■□□□□ 0.85
ERGIC1-209ENST00000520642 PRKRIP1Q9H875 184 aaPredicted RBP20.35■□□□□ 0.85
ERGIC1-209ENST00000520642 RIPK4P57078 832 aa20.34■□□□□ 0.85
ERGIC1-209ENST00000520642 LMOD3Q0VAK6 560 aa20.34■□□□□ 0.85
ERGIC1-209ENST00000520642 COL13A1Q5TAT6 717 aaPredicted RBP20.34■□□□□ 0.85
ERGIC1-209ENST00000520642 TNS4Q8IZW8 715 aa20.34■□□□□ 0.85
ERGIC1-209ENST00000520642 MIS18AQ9NYP9 233 aa20.34■□□□□ 0.85
ERGIC1-209ENST00000520642 CHADLQ6NUI6 762 aa20.33■□□□□ 0.85
ERGIC1-209ENST00000520642 CCDC24Q8N4L8 307 aa20.33■□□□□ 0.85
ERGIC1-209ENST00000520642 USP16Q9Y5T5 823 aa20.33■□□□□ 0.85
ERGIC1-209ENST00000520642 CACNA1SQ13698 1873 aa20.33■□□□□ 0.84
ERGIC1-209ENST00000520642 SLX4Q8IY92 1834 aa20.32■□□□□ 0.84
ERGIC1-209ENST00000520642 POTECB2RU33 542 aa20.32■□□□□ 0.84
ERGIC1-209ENST00000520642 CCDC93Q567U6 631 aa20.32■□□□□ 0.84
ERGIC1-209ENST00000520642 THUMPD2Q9BTF0 503 aaKnown RBP20.32■□□□□ 0.84
ERGIC1-209ENST00000520642 CREBZFQ9NS37 354 aa20.32■□□□□ 0.84
ERGIC1-209ENST00000520642 HSPA1AP0DMV8 641 aaKnown RBP20.31■□□□□ 0.84
ERGIC1-209ENST00000520642 HSPA1BP0DMV9 641 aaKnown RBP20.31■□□□□ 0.84
ERGIC1-209ENST00000520642 NPR1P16066 1061 aa20.31■□□□□ 0.84
ERGIC1-209ENST00000520642 TPTE2Q6XPS3 522 aa20.31■□□□□ 0.84
ERGIC1-209ENST00000520642 CCDC146Q8IYE0 955 aa20.31■□□□□ 0.84
ERGIC1-209ENST00000520642 PRAMEF22A3QJZ6 481 aa20.3■□□□□ 0.84
ERGIC1-209ENST00000520642 TMPOP42166 694 aaKnown RBP20.3■□□□□ 0.84
ERGIC1-209ENST00000520642 NEUROD2Q15784 382 aa20.29■□□□□ 0.84
ERGIC1-209ENST00000520642 RUNDC1Q96C34 613 aa20.29■□□□□ 0.84
ERGIC1-209ENST00000520642 SCN4AP35499 1836 aa20.29■□□□□ 0.84
ERGIC1-209ENST00000520642 ZNF316A6NFI3 1004 aaPredicted RBP20.28■□□□□ 0.84
ERGIC1-209ENST00000520642 DDNO94850 711 aaPredicted RBP20.28■□□□□ 0.84
ERGIC1-209ENST00000520642 RTKN2Q8IZC4 609 aa20.28■□□□□ 0.84
ERGIC1-209ENST00000520642 L3MBTL3Q96JM7 780 aaPredicted RBP20.28■□□□□ 0.84
ERGIC1-209ENST00000520642 TSPYL4Q9UJ04 414 aa20.28■□□□□ 0.84
ERGIC1-209ENST00000520642 NIP7Q9Y221 180 aaKnown RBP eCLIP20.28■□□□□ 0.84
ERGIC1-209ENST00000520642 PIP4K2AP48426 406 aaPredicted RBP20.27■□□□□ 0.84
ERGIC1-209ENST00000520642 FKBP4Q02790 459 aaKnown RBP eCLIP20.27■□□□□ 0.84
ERGIC1-209ENST00000520642 LDHDQ86WU2 507 aa20.27■□□□□ 0.84
ERGIC1-209ENST00000520642 ADAMTS8Q9UP79 889 aa20.27■□□□□ 0.84
ERGIC1-209ENST00000520642 RRP7AQ9Y3A4 280 aaKnown RBP20.27■□□□□ 0.84
ERGIC1-209ENST00000520642 KLRG2A4D1S0 409 aaPredicted RBP20.26■□□□□ 0.83
ERGIC1-209ENST00000520642 GTF2E1P29083 439 aaPredicted RBP20.26■□□□□ 0.83
ERGIC1-209ENST00000520642 ALDH1B1P30837 517 aa20.25■□□□□ 0.83
ERGIC1-209ENST00000520642 EIF4A1P60842 406 aaKnown RBP20.25■□□□□ 0.83
ERGIC1-209ENST00000520642 C7orf43Q8WVR3 580 aa20.25■□□□□ 0.83
ERGIC1-209ENST00000520642 LAMB4A4D0S4 1761 aa20.25■□□□□ 0.83
ERGIC1-209ENST00000520642 KDM3BQ7LBC6 1761 aa20.24■□□□□ 0.83
ERGIC1-209ENST00000520642 NYXQ9GZU5 481 aa20.24■□□□□ 0.83
ERGIC1-209ENST00000520642 BABAM1Q9NWV8 329 aa20.24■□□□□ 0.83
ERGIC1-209ENST00000520642 PCNTO95613 3336 aa20.24■□□□□ 0.83
ERGIC1-209ENST00000520642 CAPN15O75808 1086 aa20.23■□□□□ 0.83
ERGIC1-209ENST00000520642 TAF1DQ9H5J8 278 aaPredicted RBP20.23■□□□□ 0.83
ERGIC1-209ENST00000520642 NBPF26B4DH59 902 aa20.22■□□□□ 0.83
ERGIC1-209ENST00000520642 NBPF10Q6P3W6 841 aaKnown RBP20.22■□□□□ 0.83
ERGIC1-209ENST00000520642 NBPF15Q8N660 670 aa20.22■□□□□ 0.83
ERGIC1-209ENST00000520642 MKRN1Q9UHC7 482 aaKnown RBP20.22■□□□□ 0.83
ERGIC1-209ENST00000520642 HACL1Q9UJ83 578 aa20.22■□□□□ 0.83
ERGIC1-209ENST00000520642 CNTNAP1P78357 1384 aa20.21■□□□□ 0.83
ERGIC1-209ENST00000520642 PNMA8AQ86V59 439 aaPredicted RBP20.21■□□□□ 0.83
ERGIC1-209ENST00000520642 NGEFQ8N5V2 710 aa20.21■□□□□ 0.83
ERGIC1-209ENST00000520642 ZNF277Q9NRM2 450 aaPredicted RBP20.21■□□□□ 0.83
ERGIC1-209ENST00000520642 LAS1LQ9Y4W2 734 aaKnown RBP20.21■□□□□ 0.83
ERGIC1-209ENST00000520642 PASKQ96RG2 1323 aa20.21■□□□□ 0.83
ERGIC1-209ENST00000520642 ANP32CO43423 234 aa20.2■□□□□ 0.82
ERGIC1-209ENST00000520642 POTEIP0CG38 1075 aa20.2■□□□□ 0.82
ERGIC1-209ENST00000520642 POTEJP0CG39 1038 aa20.2■□□□□ 0.82
ERGIC1-209ENST00000520642 GRIPAP1Q4V328 841 aa20.2■□□□□ 0.82
ERGIC1-209ENST00000520642 CC2D2BQ6DHV5 1058 aa20.2■□□□□ 0.82
ERGIC1-209ENST00000520642 KIF6Q6ZMV9 814 aa20.2■□□□□ 0.82
ERGIC1-209ENST00000520642 FAM177BA6PVY3 158 aa20.19■□□□□ 0.82
ERGIC1-209ENST00000520642 ERVV-1B6SEH8 477 aa20.19■□□□□ 0.82
ERGIC1-209ENST00000520642 IARSP41252 1262 aaKnown RBP20.19■□□□□ 0.82
ERGIC1-209ENST00000520642 EAPPQ56P03 285 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms