RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 OLFM4Q6UX06 510 aa11.05□□□□□ -0.64
CSMD1-209ENST00000520630 SLC52A2Q9HAB3 445 aa11.05□□□□□ -0.64
CSMD1-209ENST00000520630 TSKSQ9UJT2 592 aa11.05□□□□□ -0.64
CSMD1-209ENST00000520630 IQCA1LA6NCM1 817 aa11.04□□□□□ -0.64
CSMD1-209ENST00000520630 SRGNP10124 158 aa11.04□□□□□ -0.64
CSMD1-209ENST00000520630 EAPPQ56P03 285 aaPredicted RBP11.04□□□□□ -0.64
CSMD1-209ENST00000520630 PRPF40BQ6NWY9 871 aaKnown RBP11.04□□□□□ -0.64
CSMD1-209ENST00000520630 CNTROBQ8N137 903 aa11.04□□□□□ -0.64
CSMD1-209ENST00000520630 LAMB2P55268 1798 aa11.03□□□□□ -0.64
CSMD1-209ENST00000520630 CANXP27824 592 aaKnown RBP11.03□□□□□ -0.64
CSMD1-209ENST00000520630 EPHX2P34913 555 aa11.03□□□□□ -0.64
CSMD1-209ENST00000520630 MAP2K1Q02750 393 aaPredicted RBP11.03□□□□□ -0.64
CSMD1-209ENST00000520630 CST9Q5W186 159 aa11.03□□□□□ -0.64
CSMD1-209ENST00000520630 RNF123Q5XPI4 1314 aa11.03□□□□□ -0.64
CSMD1-209ENST00000520630 PDE6BP35913 854 aa11.02□□□□□ -0.65
CSMD1-209ENST00000520630 C1orf141Q5JVX7 400 aa11.02□□□□□ -0.65
CSMD1-209ENST00000520630 STYK1Q6J9G0 422 aa11.02□□□□□ -0.65
CSMD1-209ENST00000520630 CYP4F22Q6NT55 531 aa11.02□□□□□ -0.65
CSMD1-209ENST00000520630 MCOLN1Q9GZU1 580 aa11.02□□□□□ -0.65
CSMD1-209ENST00000520630 HACL1Q9UJ83 578 aa11.02□□□□□ -0.65
CSMD1-209ENST00000520630 MKI67P46013 3256 aaKnown RBP11.02□□□□□ -0.65
CSMD1-209ENST00000520630 FZD9O00144 591 aa11.01□□□□□ -0.65
CSMD1-209ENST00000520630 RNMTO43148 476 aaKnown RBP11.01□□□□□ -0.65
CSMD1-209ENST00000520630 AOC2O75106 756 aa11.01□□□□□ -0.65
CSMD1-209ENST00000520630 SULT6B1Q6IMI4 303 aa11.01□□□□□ -0.65
CSMD1-209ENST00000520630 CAPNS2Q96L46 248 aa11.01□□□□□ -0.65
CSMD1-209ENST00000520630 DDX21Q9NR30 783 aaKnown RBP eCLIP11.01□□□□□ -0.65
CSMD1-209ENST00000520630 ZNF277Q9NRM2 450 aaPredicted RBP11.01□□□□□ -0.65
CSMD1-209ENST00000520630 PDZRN3Q9UPQ7 1066 aa11.01□□□□□ -0.65
CSMD1-209ENST00000520630 TBC1D2BQ9UPU7 963 aa11.01□□□□□ -0.65
CSMD1-209ENST00000520630 CLEC11AQ9Y240 323 aa11.01□□□□□ -0.65
CSMD1-209ENST00000520630 AKAP4Q5JQC9 854 aa11□□□□□ -0.65
CSMD1-209ENST00000520630 VSIG10Q8N0Z9 540 aa11□□□□□ -0.65
CSMD1-209ENST00000520630 CNKSR1Q969H4 720 aa11□□□□□ -0.65
CSMD1-209ENST00000520630 CAMTA2O94983 1202 aa10.99□□□□□ -0.65
CSMD1-209ENST00000520630 IL13P35225 146 aa10.99□□□□□ -0.65
CSMD1-209ENST00000520630 SLC51AQ86UW1 340 aa10.99□□□□□ -0.65
CSMD1-209ENST00000520630 MASTLQ96GX5 879 aa10.99□□□□□ -0.65
CSMD1-209ENST00000520630 GPR101Q96P66 508 aaPredicted RBP10.99□□□□□ -0.65
CSMD1-209ENST00000520630 ABT1Q9ULW3 272 aaKnown RBP10.99□□□□□ -0.65
CSMD1-209ENST00000520630 TIMELESSQ9UNS1 1208 aa10.99□□□□□ -0.65
CSMD1-209ENST00000520630 DLG5Q8TDM6 1919 aa10.98□□□□□ -0.65
CSMD1-209ENST00000520630 KLRG2A4D1S0 409 aaPredicted RBP10.98□□□□□ -0.65
CSMD1-209ENST00000520630 TRAF5O00463 557 aa10.98□□□□□ -0.65
CSMD1-209ENST00000520630 FKBP4Q02790 459 aaKnown RBP eCLIP10.98□□□□□ -0.65
CSMD1-209ENST00000520630 CENPFP49454 3210 aa10.97□□□□□ -0.65
CSMD1-209ENST00000520630 CDCA8Q53HL2 280 aa10.97□□□□□ -0.65
CSMD1-209ENST00000520630 PNMA8AQ86V59 439 aaPredicted RBP10.97□□□□□ -0.65
CSMD1-209ENST00000520630 ZNF496Q96IT1 587 aaPredicted RBP10.97□□□□□ -0.65
CSMD1-209ENST00000520630 ZIC5Q96T25 663 aa10.97□□□□□ -0.65
CSMD1-209ENST00000520630 TLL2Q9Y6L7 1015 aa10.97□□□□□ -0.65
CSMD1-209ENST00000520630 LAMB4A4D0S4 1761 aa10.97□□□□□ -0.65
CSMD1-209ENST00000520630 HEG1Q9ULI3 1381 aa10.96□□□□□ -0.65
CSMD1-209ENST00000520630 A1BGP04217 495 aa10.96□□□□□ -0.65
CSMD1-209ENST00000520630 EPS15P42566 896 aa10.96□□□□□ -0.65
CSMD1-209ENST00000520630 SCNN1DP51172 638 aa10.96□□□□□ -0.65
CSMD1-209ENST00000520630 MTHFSDQ2M296 383 aaKnown RBP10.96□□□□□ -0.65
CSMD1-209ENST00000520630 CCDC93Q567U6 631 aa10.96□□□□□ -0.65
CSMD1-209ENST00000520630 SOGA3Q5TF21 947 aa10.96□□□□□ -0.65
CSMD1-209ENST00000520630 GPC2Q8N158 579 aa10.96□□□□□ -0.65
CSMD1-209ENST00000520630 CNBD1Q8NA66 436 aa10.96□□□□□ -0.65
CSMD1-209ENST00000520630 ANKRD36CQ5JPF3 1778 aa10.95□□□□□ -0.66
CSMD1-209ENST00000520630 MAP2K2P36507 400 aa10.95□□□□□ -0.66
CSMD1-209ENST00000520630 IARSP41252 1262 aaKnown RBP10.95□□□□□ -0.66
CSMD1-209ENST00000520630 GRM1Q13255 1194 aa10.95□□□□□ -0.66
CSMD1-209ENST00000520630 SYNE4Q8N205 404 aa10.95□□□□□ -0.66
CSMD1-209ENST00000520630 BRCA2P51587 3418 aa10.94□□□□□ -0.66
CSMD1-209ENST00000520630 A0A087WZG4 1122 aa10.94□□□□□ -0.66
CSMD1-209ENST00000520630 IL6STP40189 918 aaPredicted RBP10.94□□□□□ -0.66
CSMD1-209ENST00000520630 DGKZQ13574 1117 aa10.94□□□□□ -0.66
CSMD1-209ENST00000520630 SAPCD2Q86UD0 394 aa10.94□□□□□ -0.66
CSMD1-209ENST00000520630 CFAP44Q96MT7 982 aa10.94□□□□□ -0.66
CSMD1-209ENST00000520630 SETDB2Q96T68 719 aa10.94□□□□□ -0.66
CSMD1-209ENST00000520630 KCNQ3O43525 872 aa10.93□□□□□ -0.66
CSMD1-209ENST00000520630 NPR1P16066 1061 aa10.93□□□□□ -0.66
CSMD1-209ENST00000520630 ECE1P42892 770 aa10.93□□□□□ -0.66
CSMD1-209ENST00000520630 PIP4K2AP48426 406 aaPredicted RBP10.93□□□□□ -0.66
CSMD1-209ENST00000520630 SZT2Q5T011 3432 aa10.93□□□□□ -0.66
CSMD1-209ENST00000520630 SCN9AQ15858 1988 aa10.92□□□□□ -0.66
CSMD1-209ENST00000520630 HTTP42858 3142 aa10.92□□□□□ -0.66
CSMD1-209ENST00000520630 PRAMEF22A3QJZ6 481 aa10.92□□□□□ -0.66
CSMD1-209ENST00000520630 STARD3NLO95772 234 aa10.92□□□□□ -0.66
CSMD1-209ENST00000520630 HMOX1P09601 288 aa10.92□□□□□ -0.66
CSMD1-209ENST00000520630 SOX10P56693 466 aa10.92□□□□□ -0.66
CSMD1-209ENST00000520630 ST5P78524 1137 aa10.92□□□□□ -0.66
CSMD1-209ENST00000520630 PAXIP1Q6ZW49 1069 aaPredicted RBP10.92□□□□□ -0.66
CSMD1-209ENST00000520630 IL17REQ8NFR9 667 aa10.92□□□□□ -0.66
CSMD1-209ENST00000520630 ZNF330Q9Y3S2 320 aaPredicted RBP10.92□□□□□ -0.66
CSMD1-209ENST00000520630 PSME4Q14997 1843 aa10.91□□□□□ -0.66
CSMD1-209ENST00000520630 RBBP6Q7Z6E9 1792 aaKnown RBP10.91□□□□□ -0.66
CSMD1-209ENST00000520630 BRPF1P55201 1214 aaPredicted RBP10.91□□□□□ -0.66
CSMD1-209ENST00000520630 CIAPIN1Q6FI81 312 aa10.91□□□□□ -0.66
CSMD1-209ENST00000520630 ZNF790Q6PG37 636 aa10.91□□□□□ -0.66
CSMD1-209ENST00000520630 RTKN2Q8IZC4 609 aa10.91□□□□□ -0.66
CSMD1-209ENST00000520630 PSMD1Q99460 953 aa10.91□□□□□ -0.66
CSMD1-209ENST00000520630 BEGAINQ9BUH8 593 aa10.91□□□□□ -0.66
CSMD1-209ENST00000520630 PANK3Q9H999 370 aa10.91□□□□□ -0.66
CSMD1-209ENST00000520630 GJA3Q9Y6H8 435 aa10.91□□□□□ -0.66
CSMD1-209ENST00000520630 KDM3BQ7LBC6 1761 aa10.9□□□□□ -0.66
CSMD1-209ENST00000520630 DLK2Q6UY11 383 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms