RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 CNPY4Q8N129 248 aa14.01□□□□□ -0.17
ERGIC1-208ENST00000520399 LRRFIP2Q9Y608 721 aaKnown RBP14.01□□□□□ -0.17
ERGIC1-208ENST00000520399 RALGAPBQ86X10 1494 aa14.01□□□□□ -0.17
ERGIC1-208ENST00000520399 HMGB2P26583 209 aaKnown RBP14.01□□□□□ -0.17
ERGIC1-208ENST00000520399 IFIT1P09914 478 aaKnown RBP14.01□□□□□ -0.17
ERGIC1-208ENST00000520399 F6X3S4 739 aa14.01□□□□□ -0.17
ERGIC1-208ENST00000520399 MPRIPQ6WCQ1 1025 aa14.01□□□□□ -0.17
ERGIC1-208ENST00000520399 BOLA2Q9H3K6 86 aa14.01□□□□□ -0.17
ERGIC1-208ENST00000520399 BMP2KQ9NSY1 1161 aaPredicted RBP14□□□□□ -0.17
ERGIC1-208ENST00000520399 IL16Q14005 1332 aa14□□□□□ -0.17
ERGIC1-208ENST00000520399 UNC13AQ9UPW8 1703 aa14□□□□□ -0.17
ERGIC1-208ENST00000520399 TEX2Q8IWB9 1127 aa14□□□□□ -0.17
ERGIC1-208ENST00000520399 UPF3BQ9BZI7 483 aaKnown RBP14□□□□□ -0.17
ERGIC1-208ENST00000520399 SH2B1Q9NRF2 756 aaPredicted RBP14□□□□□ -0.17
ERGIC1-208ENST00000520399 TRIM27P14373 513 aa14□□□□□ -0.17
ERGIC1-208ENST00000520399 CAVIN4Q5BKX8 364 aa14□□□□□ -0.17
ERGIC1-208ENST00000520399 COMMD10Q9Y6G5 202 aa14□□□□□ -0.17
ERGIC1-208ENST00000520399 MAP3K11Q16584 847 aa14□□□□□ -0.17
ERGIC1-208ENST00000520399 ASXL1Q8IXJ9 1541 aa14□□□□□ -0.17
ERGIC1-208ENST00000520399 EIF2AK4Q9P2K8 1649 aaKnown RBP13.99□□□□□ -0.17
ERGIC1-208ENST00000520399 FERP16591 822 aa13.99□□□□□ -0.17
ERGIC1-208ENST00000520399 ZFP91Q96JP5 570 aaPredicted RBP13.99□□□□□ -0.17
ERGIC1-208ENST00000520399 DBF4Q9UBU7 674 aaPredicted RBP13.99□□□□□ -0.17
ERGIC1-208ENST00000520399 PTCD1O75127 700 aaKnown RBP13.99□□□□□ -0.17
ERGIC1-208ENST00000520399 GBP6Q6ZN66 633 aa13.99□□□□□ -0.17
ERGIC1-208ENST00000520399 ZSCAN29Q8IWY8 852 aaPredicted RBP13.99□□□□□ -0.17
ERGIC1-208ENST00000520399 A0A1B0GUA9 196 aa13.99□□□□□ -0.17
ERGIC1-208ENST00000520399 ZWINTO95229 277 aa13.99□□□□□ -0.17
ERGIC1-208ENST00000520399 HS1BP3Q53T59 392 aa13.99□□□□□ -0.17
ERGIC1-208ENST00000520399 CCDC102AQ96A19 550 aa13.99□□□□□ -0.17
ERGIC1-208ENST00000520399 SMC1AQ14683 1233 aaKnown RBP13.98□□□□□ -0.17
ERGIC1-208ENST00000520399 ZNF287Q9HBT7 754 aa13.98□□□□□ -0.17
ERGIC1-208ENST00000520399 SLC5A1P13866 664 aa13.98□□□□□ -0.17
ERGIC1-208ENST00000520399 CCDC148Q8NFR7 591 aa13.98□□□□□ -0.17
ERGIC1-208ENST00000520399 PPP1R1BQ9UD71 204 aaPredicted RBP13.98□□□□□ -0.17
ERGIC1-208ENST00000520399 DMTNQ08495 405 aa13.98□□□□□ -0.17
ERGIC1-208ENST00000520399 IFIT5Q13325 482 aaKnown RBP13.98□□□□□ -0.17
ERGIC1-208ENST00000520399 GCOM1H8Y6P7 765 aaPredicted RBP13.98□□□□□ -0.17
ERGIC1-208ENST00000520399 ZPR1O75312 459 aa13.98□□□□□ -0.17
ERGIC1-208ENST00000520399 MYZAPP0CAP1 466 aa13.98□□□□□ -0.17
ERGIC1-208ENST00000520399 FLIIQ13045 1269 aa13.98□□□□□ -0.17
ERGIC1-208ENST00000520399 GIGYF2Q6Y7W6 1299 aaKnown RBP13.98□□□□□ -0.17
ERGIC1-208ENST00000520399 ABCF2Q9UG63 623 aa13.98□□□□□ -0.17
ERGIC1-208ENST00000520399 NUP160Q12769 1436 aa13.97□□□□□ -0.17
ERGIC1-208ENST00000520399 MBIPQ9NS73 344 aa13.97□□□□□ -0.17
ERGIC1-208ENST00000520399 POLR3GO15318 223 aaPredicted RBP13.97□□□□□ -0.17
ERGIC1-208ENST00000520399 LUZP1Q86V48 1076 aa13.97□□□□□ -0.17
ERGIC1-208ENST00000520399 PIK3R4Q99570 1358 aa13.97□□□□□ -0.17
ERGIC1-208ENST00000520399 SYCE3A1L190 88 aa13.97□□□□□ -0.17
ERGIC1-208ENST00000520399 USP5P45974 858 aa13.97□□□□□ -0.17
ERGIC1-208ENST00000520399 CCDC8Q9H0W5 538 aaPredicted RBP13.97□□□□□ -0.17
ERGIC1-208ENST00000520399 FMNL3Q8IVF7 1028 aa13.97□□□□□ -0.17
ERGIC1-208ENST00000520399 TMEM87AQ8NBN3 555 aa13.97□□□□□ -0.17
ERGIC1-208ENST00000520399 PIBF1Q8WXW3 757 aa13.97□□□□□ -0.17
ERGIC1-208ENST00000520399 MAP3K2Q9Y2U5 619 aa13.97□□□□□ -0.17
ERGIC1-208ENST00000520399 ZNF76P36508 570 aa13.97□□□□□ -0.17
ERGIC1-208ENST00000520399 EVI5LQ96CN4 794 aa13.97□□□□□ -0.17
ERGIC1-208ENST00000520399 SWAP70Q9UH65 585 aa13.96□□□□□ -0.17
ERGIC1-208ENST00000520399 CAMK4Q16566 473 aa13.96□□□□□ -0.17
ERGIC1-208ENST00000520399 MAP3K12Q12852 859 aa13.96□□□□□ -0.17
ERGIC1-208ENST00000520399 CCDC183Q5T5S1 534 aa13.96□□□□□ -0.17
ERGIC1-208ENST00000520399 C10orf67Q8IYJ2 551 aa13.96□□□□□ -0.17
ERGIC1-208ENST00000520399 WDR66Q8TBY9 1149 aa13.96□□□□□ -0.17
ERGIC1-208ENST00000520399 RRAGDQ9NQL2 400 aaPredicted RBP13.96□□□□□ -0.17
ERGIC1-208ENST00000520399 SYCP2Q9BX26 1530 aa13.96□□□□□ -0.17
ERGIC1-208ENST00000520399 NAPBQ9H115 298 aa13.96□□□□□ -0.18
ERGIC1-208ENST00000520399 SEC63Q9UGP8 760 aaKnown RBP13.96□□□□□ -0.18
ERGIC1-208ENST00000520399 MAPKBP1O60336 1514 aa13.96□□□□□ -0.18
ERGIC1-208ENST00000520399 PLCH2O75038 1416 aa13.95□□□□□ -0.18
ERGIC1-208ENST00000520399 XRCC6P12956 609 aaKnown RBP eCLIP13.95□□□□□ -0.18
ERGIC1-208ENST00000520399 LMAN1P49257 510 aa13.95□□□□□ -0.18
ERGIC1-208ENST00000520399 AP1ARQ63HQ0 302 aa13.95□□□□□ -0.18
ERGIC1-208ENST00000520399 PPP4R3AQ6IN85 833 aa13.95□□□□□ -0.18
ERGIC1-208ENST00000520399 SSBP05455 408 aaKnown RBP eCLIP13.95□□□□□ -0.18
ERGIC1-208ENST00000520399 KRT28Q7Z3Y7 464 aa13.95□□□□□ -0.18
ERGIC1-208ENST00000520399 PUS7Q96PZ0 661 aaKnown RBP13.95□□□□□ -0.18
ERGIC1-208ENST00000520399 CCDC113Q9H0I3 377 aa13.95□□□□□ -0.18
ERGIC1-208ENST00000520399 ACEP12821 1306 aa13.95□□□□□ -0.18
ERGIC1-208ENST00000520399 POLR3DP05423 398 aaPredicted RBP13.95□□□□□ -0.18
ERGIC1-208ENST00000520399 IBSPP21815 317 aaPredicted RBP13.95□□□□□ -0.18
ERGIC1-208ENST00000520399 TRMT112Q9UI30 125 aaKnown RBP13.95□□□□□ -0.18
ERGIC1-208ENST00000520399 TNRQ92752 1358 aa13.95□□□□□ -0.18
ERGIC1-208ENST00000520399 PPP1R12BO60237 982 aaPredicted RBP13.95□□□□□ -0.18
ERGIC1-208ENST00000520399 MPNDQ8N594 471 aa13.95□□□□□ -0.18
ERGIC1-208ENST00000520399 ZNF397Q8NF99 534 aaPredicted RBP13.95□□□□□ -0.18
ERGIC1-208ENST00000520399 KIF18AQ8NI77 898 aa13.95□□□□□ -0.18
ERGIC1-208ENST00000520399 CFAP43Q8NDM7 1665 aa13.94□□□□□ -0.18
ERGIC1-208ENST00000520399 MAP2K2P36507 400 aa13.94□□□□□ -0.18
ERGIC1-208ENST00000520399 ATP6V1AP38606 617 aa13.94□□□□□ -0.18
ERGIC1-208ENST00000520399 SSX2IPQ9Y2D8 614 aa13.94□□□□□ -0.18
ERGIC1-208ENST00000520399 CCDC196A0A1B0GTZ2 297 aa13.94□□□□□ -0.18
ERGIC1-208ENST00000520399 MINDY4BA8MYZ0 360 aa13.94□□□□□ -0.18
ERGIC1-208ENST00000520399 HOOK3Q86VS8 718 aa13.94□□□□□ -0.18
ERGIC1-208ENST00000520399 SKAP1Q86WV1 359 aa13.94□□□□□ -0.18
ERGIC1-208ENST00000520399 SCAND2PQ9GZW5 306 aaPredicted RBP13.94□□□□□ -0.18
ERGIC1-208ENST00000520399 LIMCH1Q9UPQ0 1083 aa13.94□□□□□ -0.18
ERGIC1-208ENST00000520399 PAXBP1Q9Y5B6 917 aa13.94□□□□□ -0.18
ERGIC1-208ENST00000520399 ZNF213O14771 459 aa13.94□□□□□ -0.18
ERGIC1-208ENST00000520399 PHAXQ9H814 394 aaKnown RBP13.94□□□□□ -0.18
ERGIC1-208ENST00000520399 FOXO3O43524 673 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms