RNA–Protein interactions for RNA: ENST00000519686.6

VNN3-212, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-212ENST00000519686 CEMIPQ8WUJ3 1361 aa12.05□□□□□ -0.48
VNN3-212ENST00000519686 BICDL1Q6ZP65 573 aa12.05□□□□□ -0.48
VNN3-212ENST00000519686 RTN4Q9NQC3 1192 aaKnown RBP12.05□□□□□ -0.48
VNN3-212ENST00000519686 AFDNP55196 1824 aaKnown RBP12.05□□□□□ -0.48
VNN3-212ENST00000519686 SERPINB2P05120 415 aa12.05□□□□□ -0.48
VNN3-212ENST00000519686 EIF5P55010 431 aaKnown RBP12.05□□□□□ -0.48
VNN3-212ENST00000519686 NPHP1O15259 732 aa12.04□□□□□ -0.48
VNN3-212ENST00000519686 MCM10Q7L590 875 aa12.04□□□□□ -0.48
VNN3-212ENST00000519686 TBC1D2BQ9UPU7 963 aa12.04□□□□□ -0.48
VNN3-212ENST00000519686 NRXN2Q9P2S2 1712 aa12.03□□□□□ -0.48
VNN3-212ENST00000519686 SCN7AQ01118 1682 aa12.03□□□□□ -0.48
VNN3-212ENST00000519686 IL6STP40189 918 aaPredicted RBP12.03□□□□□ -0.48
VNN3-212ENST00000519686 C9orf131Q5VYM1 1079 aa12.03□□□□□ -0.48
VNN3-212ENST00000519686 SP7Q8TDD2 431 aaPredicted RBP12.03□□□□□ -0.48
VNN3-212ENST00000519686 BCL2L12Q9HB09 334 aa12.03□□□□□ -0.48
VNN3-212ENST00000519686 H0YIN7 160 aa12.02□□□□□ -0.49
VNN3-212ENST00000519686 KCNQ3O43525 872 aa12.02□□□□□ -0.49
VNN3-212ENST00000519686 HTATSF1O43719 755 aaKnown RBP12.02□□□□□ -0.49
VNN3-212ENST00000519686 A1BGP04217 495 aa12.02□□□□□ -0.49
VNN3-212ENST00000519686 TBC1D9BQ66K14 1250 aa12.02□□□□□ -0.49
VNN3-212ENST00000519686 C2CD5Q86YS7 1000 aa12.02□□□□□ -0.49
VNN3-212ENST00000519686 KIF12Q96FN5 646 aa12.02□□□□□ -0.49
VNN3-212ENST00000519686 RNF181Q9P0P0 153 aa12.02□□□□□ -0.49
VNN3-212ENST00000519686 CARMIL3Q8ND23 1372 aa12.01□□□□□ -0.49
VNN3-212ENST00000519686 DLEC1Q9Y238 1755 aa12.01□□□□□ -0.49
VNN3-212ENST00000519686 SNRPA1P09661 255 aaKnown RBP12.01□□□□□ -0.49
VNN3-212ENST00000519686 C16orf71Q8IYS4 520 aaPredicted RBP12.01□□□□□ -0.49
VNN3-212ENST00000519686 TTLL6Q8N841 843 aa12.01□□□□□ -0.49
VNN3-212ENST00000519686 SETDB2Q96T68 719 aa12.01□□□□□ -0.49
VNN3-212ENST00000519686 KDM2BQ8NHM5 1336 aa12□□□□□ -0.49
VNN3-212ENST00000519686 KIF3CO14782 793 aa12□□□□□ -0.49
VNN3-212ENST00000519686 HSPA6P17066 643 aa12□□□□□ -0.49
VNN3-212ENST00000519686 PDE6BP35913 854 aa12□□□□□ -0.49
VNN3-212ENST00000519686 DCTN1Q14203 1278 aa12□□□□□ -0.49
VNN3-212ENST00000519686 DZIP3Q86Y13 1208 aaKnown RBP12□□□□□ -0.49
VNN3-212ENST00000519686 PNNQ9H307 717 aaKnown RBP12□□□□□ -0.49
VNN3-212ENST00000519686 MAP3K13O43283 966 aa11.99□□□□□ -0.49
VNN3-212ENST00000519686 ECM2O94769 699 aaPredicted RBP11.99□□□□□ -0.49
VNN3-212ENST00000519686 CHRM1P11229 460 aaPredicted RBP11.99□□□□□ -0.49
VNN3-212ENST00000519686 PIP4K2AP48426 406 aaPredicted RBP11.99□□□□□ -0.49
VNN3-212ENST00000519686 TAF7Q15545 349 aaPredicted RBP11.99□□□□□ -0.49
VNN3-212ENST00000519686 CNBD1Q8NA66 436 aa11.99□□□□□ -0.49
VNN3-212ENST00000519686 ZNF622Q969S3 477 aaKnown RBP eCLIP11.99□□□□□ -0.49
VNN3-212ENST00000519686 PDZRN3Q9UPQ7 1066 aa11.99□□□□□ -0.49
VNN3-212ENST00000519686 ZNF652Q9Y2D9 606 aa11.99□□□□□ -0.49
VNN3-212ENST00000519686 USP16Q9Y5T5 823 aa11.99□□□□□ -0.49
VNN3-212ENST00000519686 MAPK8IP3Q9UPT6 1336 aa11.98□□□□□ -0.49
VNN3-212ENST00000519686 TOMM70O94826 608 aa11.98□□□□□ -0.49
VNN3-212ENST00000519686 CAMTA2O94983 1202 aa11.98□□□□□ -0.49
VNN3-212ENST00000519686 ST5P78524 1137 aa11.98□□□□□ -0.49
VNN3-212ENST00000519686 BRIP1Q9BX63 1249 aa11.98□□□□□ -0.49
VNN3-212ENST00000519686 NMRK2Q9NPI5 230 aa11.98□□□□□ -0.49
VNN3-212ENST00000519686 BCORQ6W2J9 1755 aa11.98□□□□□ -0.49
VNN3-212ENST00000519686 PRAMEF22A3QJZ6 481 aa11.97□□□□□ -0.49
VNN3-212ENST00000519686 LMNB1P20700 586 aa11.97□□□□□ -0.49
VNN3-212ENST00000519686 RASSF7Q02833 373 aa11.97□□□□□ -0.49
VNN3-212ENST00000519686 PRR5LQ6MZQ0 368 aa11.97□□□□□ -0.49
VNN3-212ENST00000519686 CCDC24Q8N4L8 307 aa11.97□□□□□ -0.49
VNN3-212ENST00000519686 PNISRQ8TF01 805 aaKnown RBP11.97□□□□□ -0.49
VNN3-212ENST00000519686 SBF1O95248 1867 aa11.97□□□□□ -0.49
VNN3-212ENST00000519686 DLG5Q8TDM6 1919 aa11.96□□□□□ -0.49
VNN3-212ENST00000519686 CLEC4GQ6UXB4 293 aa11.96□□□□□ -0.49
VNN3-212ENST00000519686 NBPF5PQ86XG9 351 aaPredicted RBP11.96□□□□□ -0.49
VNN3-212ENST00000519686 MIS18AQ9NYP9 233 aa11.96□□□□□ -0.49
VNN3-212ENST00000519686 ANKRD31Q8N7Z5 1873 aa11.96□□□□□ -0.49
VNN3-212ENST00000519686 GABBR2O75899 941 aa11.95□□□□□ -0.5
VNN3-212ENST00000519686 NFE2L2Q16236 605 aa11.95□□□□□ -0.5
VNN3-212ENST00000519686 TNRC6CQ9HCJ0 1690 aaKnown RBP11.95□□□□□ -0.5
VNN3-212ENST00000519686 LAMB4A4D0S4 1761 aa11.95□□□□□ -0.5
VNN3-212ENST00000519686 ZC3H4Q9UPT8 1303 aaKnown RBP11.95□□□□□ -0.5
VNN3-212ENST00000519686 C21orf2O43822 256 aa11.94□□□□□ -0.5
VNN3-212ENST00000519686 APLP1P51693 650 aa11.94□□□□□ -0.5
VNN3-212ENST00000519686 RALBP1Q15311 655 aa11.94□□□□□ -0.5
VNN3-212ENST00000519686 CNKSR1Q969H4 720 aa11.94□□□□□ -0.5
VNN3-212ENST00000519686 PLEKHF1Q96S99 279 aa11.94□□□□□ -0.5
VNN3-212ENST00000519686 RRAGCQ9HB90 399 aa11.94□□□□□ -0.5
VNN3-212ENST00000519686 COL11A2P13942 1736 aaPredicted RBP11.94□□□□□ -0.5
VNN3-212ENST00000519686 NBPF26B4DH59 902 aa11.93□□□□□ -0.5
VNN3-212ENST00000519686 GALR2O43603 387 aaPredicted RBP11.93□□□□□ -0.5
VNN3-212ENST00000519686 CLCN6P51797 869 aa11.93□□□□□ -0.5
VNN3-212ENST00000519686 NBPF10Q6P3W6 841 aaKnown RBP11.93□□□□□ -0.5
VNN3-212ENST00000519686 NBPF15Q8N660 670 aa11.93□□□□□ -0.5
VNN3-212ENST00000519686 RBM46Q8TBY0 533 aaKnown RBP11.93□□□□□ -0.5
VNN3-212ENST00000519686 MS4A3Q96HJ5 214 aa11.93□□□□□ -0.5
VNN3-212ENST00000519686 NIP7Q9Y221 180 aaKnown RBP eCLIP11.93□□□□□ -0.5
VNN3-212ENST00000519686 PCDHB13Q9Y5F0 798 aa11.93□□□□□ -0.5
VNN3-212ENST00000519686 TIAM2Q8IVF5 1701 aa11.93□□□□□ -0.5
VNN3-212ENST00000519686 CACNA1SQ13698 1873 aa11.93□□□□□ -0.5
VNN3-212ENST00000519686 KDM3BQ7LBC6 1761 aa11.93□□□□□ -0.5
VNN3-212ENST00000519686 GTF2E1P29083 439 aaPredicted RBP11.92□□□□□ -0.5
VNN3-212ENST00000519686 SOGA3Q5TF21 947 aa11.92□□□□□ -0.5
VNN3-212ENST00000519686 STYK1Q6J9G0 422 aa11.92□□□□□ -0.5
VNN3-212ENST00000519686 TPTE2Q6XPS3 522 aa11.92□□□□□ -0.5
VNN3-212ENST00000519686 NGEFQ8N5V2 710 aa11.92□□□□□ -0.5
VNN3-212ENST00000519686 MASTLQ96GX5 879 aa11.92□□□□□ -0.5
VNN3-212ENST00000519686 THUMPD2Q9BTF0 503 aaKnown RBP11.92□□□□□ -0.5
VNN3-212ENST00000519686 PCDHB8Q9UN66 801 aa11.92□□□□□ -0.5
VNN3-212ENST00000519686 CCDC88AQ3V6T2 1871 aa11.92□□□□□ -0.5
VNN3-212ENST00000519686 CEP350Q5VT06 3117 aa11.92□□□□□ -0.5
VNN3-212ENST00000519686 FAM177BA6PVY3 158 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms