RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 ANKRD13DQ6ZTN6 518 aa10.31□□□□□ -0.76
HMGB4-203ENST00000519684 GPATCH3Q96I76 525 aa10.31□□□□□ -0.76
HMGB4-203ENST00000519684 NEURL1BA8MQ27 555 aa10.3□□□□□ -0.76
HMGB4-203ENST00000519684 CLASRPQ8N2M8 674 aaKnown RBP10.3□□□□□ -0.76
HMGB4-203ENST00000519684 DDX54Q8TDD1 881 aaKnown RBP10.3□□□□□ -0.76
HMGB4-203ENST00000519684 SUCLG2Q96I99 432 aa10.3□□□□□ -0.76
HMGB4-203ENST00000519684 ESYT1Q9BSJ8 1104 aa10.3□□□□□ -0.76
HMGB4-203ENST00000519684 GLI3P10071 1580 aa10.3□□□□□ -0.76
HMGB4-203ENST00000519684 IGKV5-2P06315 115 aa10.3□□□□□ -0.76
HMGB4-203ENST00000519684 NKX1-1Q15270 411 aaPredicted RBP10.3□□□□□ -0.76
HMGB4-203ENST00000519684 COL14A1Q05707 1796 aaKnown RBP10.3□□□□□ -0.76
HMGB4-203ENST00000519684 CHMLP26374 656 aa10.29□□□□□ -0.76
HMGB4-203ENST00000519684 G3BP1Q13283 466 aaKnown RBP eCLIP10.29□□□□□ -0.76
HMGB4-203ENST00000519684 GCKRQ14397 625 aa10.29□□□□□ -0.76
HMGB4-203ENST00000519684 RBM42Q9BTD8 480 aaKnown RBP10.29□□□□□ -0.76
HMGB4-203ENST00000519684 BICC1Q9H694 974 aaKnown RBP10.29□□□□□ -0.76
HMGB4-203ENST00000519684 TTC41PQ6P2S7 1318 aa10.29□□□□□ -0.76
HMGB4-203ENST00000519684 ST18O60284 1047 aa10.29□□□□□ -0.76
HMGB4-203ENST00000519684 IFIT2P09913 472 aaKnown RBP10.29□□□□□ -0.76
HMGB4-203ENST00000519684 CNTROBQ8N137 903 aa10.29□□□□□ -0.76
HMGB4-203ENST00000519684 CIZ1Q9ULV3 898 aaPredicted RBP10.29□□□□□ -0.76
HMGB4-203ENST00000519684 ROBO1Q9Y6N7 1651 aa10.29□□□□□ -0.76
HMGB4-203ENST00000519684 KCPQ6ZWJ8 1503 aa10.28□□□□□ -0.76
HMGB4-203ENST00000519684 PIP4K2AP48426 406 aaPredicted RBP10.28□□□□□ -0.76
HMGB4-203ENST00000519684 PLBD2Q8NHP8 589 aa10.28□□□□□ -0.76
HMGB4-203ENST00000519684 USP42Q9H9J4 1324 aaKnown RBP10.28□□□□□ -0.76
HMGB4-203ENST00000519684 GLRX3O76003 335 aaKnown RBP10.28□□□□□ -0.76
HMGB4-203ENST00000519684 LRP10Q7Z4F1 713 aa10.28□□□□□ -0.76
HMGB4-203ENST00000519684 PI4K2BQ8TCG2 481 aa10.28□□□□□ -0.76
HMGB4-203ENST00000519684 PA2G4Q9UQ80 394 aaKnown RBP10.28□□□□□ -0.76
HMGB4-203ENST00000519684 CD2BP2O95400 341 aaKnown RBP10.27□□□□□ -0.77
HMGB4-203ENST00000519684 ANO2Q9NQ90 1003 aa10.27□□□□□ -0.77
HMGB4-203ENST00000519684 BTG4Q9NY30 223 aa10.27□□□□□ -0.77
HMGB4-203ENST00000519684 TMOD3Q9NYL9 352 aa10.27□□□□□ -0.77
HMGB4-203ENST00000519684 TOGARAM1Q9Y4F4 1720 aa10.27□□□□□ -0.77
HMGB4-203ENST00000519684 AHDC1Q5TGY3 1603 aaPredicted RBP10.27□□□□□ -0.77
HMGB4-203ENST00000519684 MAP4K4O95819 1239 aaPredicted RBP10.27□□□□□ -0.77
HMGB4-203ENST00000519684 GSE1Q14687 1217 aa10.27□□□□□ -0.77
HMGB4-203ENST00000519684 AACSQ86V21 672 aa10.27□□□□□ -0.77
HMGB4-203ENST00000519684 UNC5CLQ8IV45 518 aa10.27□□□□□ -0.77
HMGB4-203ENST00000519684 KAZALD1Q96I82 304 aa10.27□□□□□ -0.77
HMGB4-203ENST00000519684 ECHDC1Q9NTX5 307 aa10.27□□□□□ -0.77
HMGB4-203ENST00000519684 NUP188Q5SRE5 1749 aa10.26□□□□□ -0.77
HMGB4-203ENST00000519684 COL22A1Q8NFW1 1626 aaPredicted RBP10.26□□□□□ -0.77
HMGB4-203ENST00000519684 PTCD1O75127 700 aaKnown RBP10.26□□□□□ -0.77
HMGB4-203ENST00000519684 TNS2Q63HR2 1409 aa10.26□□□□□ -0.77
HMGB4-203ENST00000519684 EPB41L2O43491 1005 aaKnown RBP10.25□□□□□ -0.77
HMGB4-203ENST00000519684 DDIT3P35638 169 aa10.25□□□□□ -0.77
HMGB4-203ENST00000519684 FOXD4L1Q9NU39 408 aa10.25□□□□□ -0.77
HMGB4-203ENST00000519684 PLCH1Q4KWH8 1693 aa10.25□□□□□ -0.77
HMGB4-203ENST00000519684 COL15A1P39059 1388 aa10.25□□□□□ -0.77
HMGB4-203ENST00000519684 A0A087WZG4 1122 aa10.25□□□□□ -0.77
HMGB4-203ENST00000519684 ANAPC15P60006 121 aa10.25□□□□□ -0.77
HMGB4-203ENST00000519684 UBE3BQ7Z3V4 1068 aa10.25□□□□□ -0.77
HMGB4-203ENST00000519684 NBPF26B4DH59 902 aa10.24□□□□□ -0.77
HMGB4-203ENST00000519684 ATP5J2-PTCD1G3V325 749 aa10.24□□□□□ -0.77
HMGB4-203ENST00000519684 MCM4P33991 863 aa10.24□□□□□ -0.77
HMGB4-203ENST00000519684 NBPF14Q5TI25 921 aa10.24□□□□□ -0.77
HMGB4-203ENST00000519684 NBPF10Q6P3W6 841 aaKnown RBP10.24□□□□□ -0.77
HMGB4-203ENST00000519684 NBPF15Q8N660 670 aa10.24□□□□□ -0.77
HMGB4-203ENST00000519684 RUFY2Q8WXA3 655 aa10.24□□□□□ -0.77
HMGB4-203ENST00000519684 SIL1Q9H173 461 aa10.24□□□□□ -0.77
HMGB4-203ENST00000519684 DIAPH3Q9NSV4 1193 aa10.24□□□□□ -0.77
HMGB4-203ENST00000519684 DDX11L8A8MPP1 907 aa10.24□□□□□ -0.77
HMGB4-203ENST00000519684 KIAA1211Q6ZU35 1233 aa10.24□□□□□ -0.77
HMGB4-203ENST00000519684 GBP4Q96PP9 640 aa10.24□□□□□ -0.77
HMGB4-203ENST00000519684 WNK3Q9BYP7 1800 aa10.23□□□□□ -0.77
HMGB4-203ENST00000519684 SASH1O94885 1247 aa10.23□□□□□ -0.77
HMGB4-203ENST00000519684 A1BGP04217 495 aa10.23□□□□□ -0.77
HMGB4-203ENST00000519684 MCM2P49736 904 aa10.23□□□□□ -0.77
HMGB4-203ENST00000519684 TEX13AQ9BXU3 409 aaPredicted RBP10.23□□□□□ -0.77
HMGB4-203ENST00000519684 CWC25Q9NXE8 425 aaPredicted RBP10.23□□□□□ -0.77
HMGB4-203ENST00000519684 COL16A1Q07092 1604 aaPredicted RBP10.23□□□□□ -0.77
HMGB4-203ENST00000519684 ITGB4P16144 1822 aa10.23□□□□□ -0.77
HMGB4-203ENST00000519684 EPHA10Q5JZY3 1008 aa10.23□□□□□ -0.77
HMGB4-203ENST00000519684 JARID2Q92833 1246 aaPredicted RBP10.23□□□□□ -0.77
HMGB4-203ENST00000519684 EVI5LQ96CN4 794 aa10.23□□□□□ -0.77
HMGB4-203ENST00000519684 COPRSQ9NQ92 184 aa10.23□□□□□ -0.77
HMGB4-203ENST00000519684 SGSM2O43147 1006 aa10.22□□□□□ -0.77
HMGB4-203ENST00000519684 NEK4P51957 841 aa10.22□□□□□ -0.77
HMGB4-203ENST00000519684 RAB3GAP1Q15042 981 aa10.22□□□□□ -0.77
HMGB4-203ENST00000519684 RABL6Q3YEC7 729 aaPredicted RBP10.22□□□□□ -0.77
HMGB4-203ENST00000519684 TTLL7Q6ZT98 887 aa10.22□□□□□ -0.77
HMGB4-203ENST00000519684 IL27Q8NEV9 243 aa10.22□□□□□ -0.77
HMGB4-203ENST00000519684 DISP2A7MBM2 1401 aa10.22□□□□□ -0.77
HMGB4-203ENST00000519684 LRP6O75581 1613 aa10.22□□□□□ -0.77
HMGB4-203ENST00000519684 PHLPP1O60346 1717 aa10.22□□□□□ -0.77
HMGB4-203ENST00000519684 TJP1Q07157 1748 aa10.22□□□□□ -0.77
HMGB4-203ENST00000519684 HIP1O00291 1037 aa10.22□□□□□ -0.77
HMGB4-203ENST00000519684 PTMSP20962 102 aa10.22□□□□□ -0.77
HMGB4-203ENST00000519684 VSIG10Q8N0Z9 540 aa10.22□□□□□ -0.77
HMGB4-203ENST00000519684 KLHDC4Q8TBB5 520 aa10.22□□□□□ -0.77
HMGB4-203ENST00000519684 CCDC8Q9H0W5 538 aaPredicted RBP10.22□□□□□ -0.77
HMGB4-203ENST00000519684 ZBTB3Q9H5J0 574 aa10.22□□□□□ -0.77
HMGB4-203ENST00000519684 CWC22Q9HCG8 908 aaKnown RBP10.22□□□□□ -0.77
HMGB4-203ENST00000519684 STARD3NLO95772 234 aa10.21□□□□□ -0.77
HMGB4-203ENST00000519684 CWC27Q6UX04 472 aaKnown RBP10.21□□□□□ -0.77
HMGB4-203ENST00000519684 KIF6Q6ZMV9 814 aa10.21□□□□□ -0.77
HMGB4-203ENST00000519684 CCDC191Q8NCU4 936 aa10.21□□□□□ -0.77
HMGB4-203ENST00000519684 TNPO1Q92973 898 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms