RNA–Protein interactions for RNA: ENST00000519534.1

CHTF8-206, Transcript of chromosome transmission fidelity factor 8, human

TSL 2

Gene CHTF8, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHTF8-206	ENST00000519534	MS4A1	P11836	297 aa		13.77	□□□□□ -0.21
CHTF8-206	ENST00000519534	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.77	□□□□□ -0.21
CHTF8-206	ENST00000519534	AMIGO3	Q86WK7	504 aa		13.77	□□□□□ -0.21
CHTF8-206	ENST00000519534	RREB1	Q92766	1687 aa		13.77	□□□□□ -0.21
CHTF8-206	ENST00000519534	API5	Q9BZZ5	524 aa	Known RBP	13.77	□□□□□ -0.21
CHTF8-206	ENST00000519534	USP42	Q9H9J4	1324 aa	Known RBP	13.77	□□□□□ -0.21
CHTF8-206	ENST00000519534	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.77	□□□□□ -0.21
CHTF8-206	ENST00000519534	COL5A3	P25940	1745 aa	Predicted RBP	13.76	□□□□□ -0.21
CHTF8-206	ENST00000519534	ANXA1	P04083	346 aa		13.76	□□□□□ -0.21
CHTF8-206	ENST00000519534	PIP4K2A	P48426	406 aa	Predicted RBP	13.76	□□□□□ -0.21
CHTF8-206	ENST00000519534	TTLL7	Q6ZT98	887 aa		13.76	□□□□□ -0.21
CHTF8-206	ENST00000519534	G2E3	Q7L622	706 aa		13.76	□□□□□ -0.21
CHTF8-206	ENST00000519534	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.76	□□□□□ -0.21
CHTF8-206	ENST00000519534	TBC1D2B	Q9UPU7	963 aa		13.76	□□□□□ -0.21
CHTF8-206	ENST00000519534	PI4KAP2	A4QPH2	592 aa		13.75	□□□□□ -0.21
CHTF8-206	ENST00000519534	TCERG1	O14776	1098 aa	Known RBP	13.75	□□□□□ -0.21
CHTF8-206	ENST00000519534	BCAR3	O75815	825 aa		13.75	□□□□□ -0.21
CHTF8-206	ENST00000519534	GYS1	P13807	737 aa		13.75	□□□□□ -0.21
CHTF8-206	ENST00000519534	AIMP1	Q12904	312 aa	Known RBP	13.75	□□□□□ -0.21
CHTF8-206	ENST00000519534	FKBP5	Q13451	457 aa	Predicted RBP	13.75	□□□□□ -0.21
CHTF8-206	ENST00000519534	TCIRG1	Q13488	830 aa		13.75	□□□□□ -0.21
CHTF8-206	ENST00000519534	RIC3	Q7Z5B4	369 aa		13.75	□□□□□ -0.21
CHTF8-206	ENST00000519534	PI4KAP1	Q8N8J0	262 aa		13.75	□□□□□ -0.21
CHTF8-206	ENST00000519534	METTL22	Q9BUU2	404 aa	Predicted RBP	13.75	□□□□□ -0.21
CHTF8-206	ENST00000519534	NOB1	Q9ULX3	412 aa	Known RBP	13.75	□□□□□ -0.21
CHTF8-206	ENST00000519534	PHF14	O94880	888 aa		13.74	□□□□□ -0.21
CHTF8-206	ENST00000519534	ZKSCAN2	Q63HK3	967 aa		13.74	□□□□□ -0.21
CHTF8-206	ENST00000519534	ATF7IP	Q6VMQ6	1270 aa		13.74	□□□□□ -0.21
CHTF8-206	ENST00000519534	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.74	□□□□□ -0.21
CHTF8-206	ENST00000519534	TAF1L	Q8IZX4	1826 aa		13.74	□□□□□ -0.21
CHTF8-206	ENST00000519534	LAMB4	A4D0S4	1761 aa		13.73	□□□□□ -0.21
CHTF8-206	ENST00000519534	CENPB	P07199	599 aa	Predicted RBP	13.73	□□□□□ -0.21
CHTF8-206	ENST00000519534	TM4SF1	P30408	202 aa		13.73	□□□□□ -0.21
CHTF8-206	ENST00000519534	NEXN	Q0ZGT2	675 aa		13.73	□□□□□ -0.21
CHTF8-206	ENST00000519534	R3HDM1	Q15032	1099 aa	Known RBP	13.73	□□□□□ -0.21
CHTF8-206	ENST00000519534	PARP10	Q53GL7	1025 aa		13.73	□□□□□ -0.21
CHTF8-206	ENST00000519534	USPL1	Q5W0Q7	1092 aa		13.73	□□□□□ -0.21
CHTF8-206	ENST00000519534	ZNF34	Q8IZ26	560 aa		13.73	□□□□□ -0.21
CHTF8-206	ENST00000519534	DNAAF4	Q8WXU2	420 aa		13.73	□□□□□ -0.21
CHTF8-206	ENST00000519534	ARX	Q96QS3	562 aa		13.73	□□□□□ -0.21
CHTF8-206	ENST00000519534	ISCA1	Q9BUE6	129 aa		13.73	□□□□□ -0.21
CHTF8-206	ENST00000519534	MTFR1L	Q9H019	292 aa		13.73	□□□□□ -0.21
CHTF8-206	ENST00000519534	BCL2L12	Q9HB09	334 aa		13.73	□□□□□ -0.21
CHTF8-206	ENST00000519534	MAP3K2	Q9Y2U5	619 aa		13.73	□□□□□ -0.21
CHTF8-206	ENST00000519534	MYH14	Q7Z406	1995 aa	Known RBP	13.72	□□□□□ -0.21
CHTF8-206	ENST00000519534	RNF123	Q5XPI4	1314 aa		13.72	□□□□□ -0.21
CHTF8-206	ENST00000519534	PDE3A	Q14432	1141 aa		13.72	□□□□□ -0.21
CHTF8-206	ENST00000519534	CCDC191	Q8NCU4	936 aa		13.72	□□□□□ -0.21
CHTF8-206	ENST00000519534	LINS1	Q8NG48	757 aa		13.72	□□□□□ -0.21
CHTF8-206	ENST00000519534	BCL2L13	Q9BXK5	485 aa		13.72	□□□□□ -0.21
CHTF8-206	ENST00000519534	NUP188	Q5SRE5	1749 aa		13.72	□□□□□ -0.21
CHTF8-206	ENST00000519534	ALDH1L1	O75891	902 aa		13.71	□□□□□ -0.21
CHTF8-206	ENST00000519534	CCT4	P50991	539 aa	Known RBP	13.71	□□□□□ -0.21
CHTF8-206	ENST00000519534	HLF	Q16534	295 aa		13.71	□□□□□ -0.21
CHTF8-206	ENST00000519534	SETDB2	Q96T68	719 aa		13.71	□□□□□ -0.21
CHTF8-206	ENST00000519534	ZBTB3	Q9H5J0	574 aa		13.71	□□□□□ -0.21
CHTF8-206	ENST00000519534	ATP10D	Q9P241	1426 aa		13.71	□□□□□ -0.22
CHTF8-206	ENST00000519534	ADCY9	O60503	1353 aa		13.71	□□□□□ -0.22
CHTF8-206	ENST00000519534	TRIM27	P14373	513 aa		13.7	□□□□□ -0.22
CHTF8-206	ENST00000519534	FKBP8	Q14318	412 aa		13.7	□□□□□ -0.22
CHTF8-206	ENST00000519534	BEND3	Q5T5X7	828 aa		13.7	□□□□□ -0.22
CHTF8-206	ENST00000519534	INTS3	Q68E01	1043 aa	Known RBP	13.7	□□□□□ -0.22
CHTF8-206	ENST00000519534	SMIM5	Q71RC9	77 aa		13.7	□□□□□ -0.22
CHTF8-206	ENST00000519534	SRP68	Q9UHB9	627 aa	Known RBP	13.7	□□□□□ -0.22
CHTF8-206	ENST00000519534	HSP90B1	P14625	803 aa	Known RBP	13.69	□□□□□ -0.22
CHTF8-206	ENST00000519534	TPTE2	Q6XPS3	522 aa		13.69	□□□□□ -0.22
CHTF8-206	ENST00000519534	PPP1R42	Q7Z4L9	355 aa		13.69	□□□□□ -0.22
CHTF8-206	ENST00000519534	FRAT1	Q92837	279 aa	Predicted RBP	13.69	□□□□□ -0.22
CHTF8-206	ENST00000519534	NYX	Q9GZU5	481 aa		13.69	□□□□□ -0.22
CHTF8-206	ENST00000519534	CACNA1F	O60840	1977 aa		13.69	□□□□□ -0.22
CHTF8-206	ENST00000519534	ABCC4	O15439	1325 aa		13.68	□□□□□ -0.22
CHTF8-206	ENST00000519534	NFIX	Q14938	502 aa		13.68	□□□□□ -0.22
CHTF8-206	ENST00000519534	TBC1D9B	Q66K14	1250 aa		13.68	□□□□□ -0.22
CHTF8-206	ENST00000519534	NLRP10	Q86W26	655 aa		13.68	□□□□□ -0.22
CHTF8-206	ENST00000519534	DZIP1L	Q8IYY4	767 aa	Known RBP	13.68	□□□□□ -0.22
CHTF8-206	ENST00000519534	SRCIN1	Q9C0H9	1055 aa		13.68	□□□□□ -0.22
CHTF8-206	ENST00000519534	CHMP4B	Q9H444	224 aa	Known RBP	13.68	□□□□□ -0.22
CHTF8-206	ENST00000519534	HDAC5	Q9UQL6	1122 aa		13.68	□□□□□ -0.22
CHTF8-206	ENST00000519534	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
CHTF8-206	ENST00000519534	UBR3	Q6ZT12	1888 aa		13.67	□□□□□ -0.22
CHTF8-206	ENST00000519534	QSER1	Q2KHR3	1735 aa		13.67	□□□□□ -0.22
CHTF8-206	ENST00000519534	NEURL1B	A8MQ27	555 aa		13.67	□□□□□ -0.22
CHTF8-206	ENST00000519534		F6X3S4	739 aa		13.67	□□□□□ -0.22
CHTF8-206	ENST00000519534	IGKV5-2	P06315	115 aa		13.67	□□□□□ -0.22
CHTF8-206	ENST00000519534	SLC10A5	Q5PT55	438 aa		13.67	□□□□□ -0.22
CHTF8-206	ENST00000519534	MYD88	Q99836	296 aa		13.67	□□□□□ -0.22
CHTF8-206	ENST00000519534	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.67	□□□□□ -0.22
CHTF8-206	ENST00000519534	CWC25	Q9NXE8	425 aa	Predicted RBP	13.67	□□□□□ -0.22
CHTF8-206	ENST00000519534	CARMIL3	Q8ND23	1372 aa		13.67	□□□□□ -0.22
CHTF8-206	ENST00000519534	POLRMT	O00411	1230 aa	Known RBP	13.66	□□□□□ -0.22
CHTF8-206	ENST00000519534	POLD1	P28340	1107 aa		13.66	□□□□□ -0.22
CHTF8-206	ENST00000519534	RRP1	P56182	461 aa	Known RBP	13.66	□□□□□ -0.22
CHTF8-206	ENST00000519534	GCKR	Q14397	625 aa		13.66	□□□□□ -0.22
CHTF8-206	ENST00000519534	FTSJ3	Q8IY81	847 aa	Known RBP	13.66	□□□□□ -0.22
CHTF8-206	ENST00000519534	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.66	□□□□□ -0.22
CHTF8-206	ENST00000519534	SGIP1	Q9BQI5	828 aa		13.66	□□□□□ -0.22
CHTF8-206	ENST00000519534	UTP14A	Q9BVJ6	771 aa	Known RBP	13.66	□□□□□ -0.22
CHTF8-206	ENST00000519534	SPON1	Q9HCB6	807 aa		13.66	□□□□□ -0.22
CHTF8-206	ENST00000519534	PARP3	Q9Y6F1	533 aa		13.66	□□□□□ -0.22
CHTF8-206	ENST00000519534	PXDNL	A1KZ92	1463 aa		13.66	□□□□□ -0.22

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