RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 SBF1O95248 1867 aa14.38□□□□□ -0.11
PVT1-208ENST00000519481 GLTPD2A6NH11 291 aa14.37□□□□□ -0.11
PVT1-208ENST00000519481 C21orf2O43822 256 aa14.37□□□□□ -0.11
PVT1-208ENST00000519481 STYK1Q6J9G0 422 aa14.37□□□□□ -0.11
PVT1-208ENST00000519481 DPY19L2Q6NUT2 758 aa14.37□□□□□ -0.11
PVT1-208ENST00000519481 TPTE2Q6XPS3 522 aa14.37□□□□□ -0.11
PVT1-208ENST00000519481 MASTLQ96GX5 879 aa14.37□□□□□ -0.11
PVT1-208ENST00000519481 NFKBIEO00221 500 aa14.36□□□□□ -0.11
PVT1-208ENST00000519481 VEGFAP15692 232 aaPredicted RBP14.36□□□□□ -0.11
PVT1-208ENST00000519481 NFE2L2Q16236 605 aa14.36□□□□□ -0.11
PVT1-208ENST00000519481 SMC1BQ8NDV3 1235 aa14.36□□□□□ -0.11
PVT1-208ENST00000519481 MIS18AQ9NYP9 233 aa14.36□□□□□ -0.11
PVT1-208ENST00000519481 NIP7Q9Y221 180 aaKnown RBP eCLIP14.36□□□□□ -0.11
PVT1-208ENST00000519481 SRGNP10124 158 aa14.35□□□□□ -0.11
PVT1-208ENST00000519481 GTF2E1P29083 439 aaPredicted RBP14.35□□□□□ -0.11
PVT1-208ENST00000519481 TAOK3Q9H2K8 898 aa14.35□□□□□ -0.11
PVT1-208ENST00000519481 ANKRD31Q8N7Z5 1873 aa14.34□□□□□ -0.11
PVT1-208ENST00000519481 TNRC6CQ9HCJ0 1690 aaKnown RBP14.34□□□□□ -0.11
PVT1-208ENST00000519481 NBPF26B4DH59 902 aa14.34□□□□□ -0.11
PVT1-208ENST00000519481 ERFEQ4G0M1 354 aa14.34□□□□□ -0.11
PVT1-208ENST00000519481 PRPF40BQ6NWY9 871 aaKnown RBP14.34□□□□□ -0.11
PVT1-208ENST00000519481 NBPF10Q6P3W6 841 aaKnown RBP14.34□□□□□ -0.11
PVT1-208ENST00000519481 NBPF15Q8N660 670 aa14.34□□□□□ -0.11
PVT1-208ENST00000519481 PLEKHF1Q96S99 279 aa14.34□□□□□ -0.11
PVT1-208ENST00000519481 BCORQ6W2J9 1755 aa14.34□□□□□ -0.11
PVT1-208ENST00000519481 FAM177BA6PVY3 158 aa14.33□□□□□ -0.12
PVT1-208ENST00000519481 NPR1P16066 1061 aa14.33□□□□□ -0.12
PVT1-208ENST00000519481 PRELPP51888 382 aa14.33□□□□□ -0.12
PVT1-208ENST00000519481 RALBP1Q15311 655 aa14.33□□□□□ -0.12
PVT1-208ENST00000519481 KIF6Q6ZMV9 814 aa14.33□□□□□ -0.12
PVT1-208ENST00000519481 NGEFQ8N5V2 710 aa14.33□□□□□ -0.12
PVT1-208ENST00000519481 LTBP3Q9NS15 1303 aa14.33□□□□□ -0.12
PVT1-208ENST00000519481 EIF4A1P60842 406 aaKnown RBP14.32□□□□□ -0.12
PVT1-208ENST00000519481 CCDC93Q567U6 631 aa14.32□□□□□ -0.12
PVT1-208ENST00000519481 NYXQ9GZU5 481 aa14.32□□□□□ -0.12
PVT1-208ENST00000519481 RRP7AQ9Y3A4 280 aaKnown RBP14.32□□□□□ -0.12
PVT1-208ENST00000519481 ERVV-1B6SEH8 477 aa14.31□□□□□ -0.12
PVT1-208ENST00000519481 COL11A2P13942 1736 aaPredicted RBP14.3□□□□□ -0.12
PVT1-208ENST00000519481 CCDC88AQ3V6T2 1871 aa14.3□□□□□ -0.12
PVT1-208ENST00000519481 ALDH1B1P30837 517 aa14.3□□□□□ -0.12
PVT1-208ENST00000519481 LMOD3Q0VAK6 560 aa14.3□□□□□ -0.12
PVT1-208ENST00000519481 HLFQ16534 295 aa14.3□□□□□ -0.12
PVT1-208ENST00000519481 DNAJC5GQ8N7S2 189 aa14.3□□□□□ -0.12
PVT1-208ENST00000519481 THUMPD2Q9BTF0 503 aaKnown RBP14.3□□□□□ -0.12
PVT1-208ENST00000519481 TSPYL4Q9UJ04 414 aa14.3□□□□□ -0.12
PVT1-208ENST00000519481 MAP3K15Q6ZN16 1313 aa14.3□□□□□ -0.12
PVT1-208ENST00000519481 KLRG2A4D1S0 409 aaPredicted RBP14.29□□□□□ -0.12
PVT1-208ENST00000519481 MYL6BP14649 208 aa14.29□□□□□ -0.12
PVT1-208ENST00000519481 RIPK4P57078 832 aa14.29□□□□□ -0.12
PVT1-208ENST00000519481 IFFO2Q5TF58 517 aa14.29□□□□□ -0.12
PVT1-208ENST00000519481 ERBB4Q15303 1308 aa14.29□□□□□ -0.12
PVT1-208ENST00000519481 TIAM2Q8IVF5 1701 aa14.29□□□□□ -0.12
PVT1-208ENST00000519481 DLG5Q8TDM6 1919 aa14.29□□□□□ -0.12
PVT1-208ENST00000519481 LAMB4A4D0S4 1761 aa14.28□□□□□ -0.12
PVT1-208ENST00000519481 FER1L6Q2WGJ9 1857 aa14.28□□□□□ -0.12
PVT1-208ENST00000519481 SLX4Q8IY92 1834 aa14.28□□□□□ -0.12
PVT1-208ENST00000519481 RTKN2Q8IZC4 609 aa14.28□□□□□ -0.12
PVT1-208ENST00000519481 KLRG1Q96E93 195 aa14.28□□□□□ -0.12
PVT1-208ENST00000519481 WDR90Q96KV7 1748 aa14.27□□□□□ -0.12
PVT1-208ENST00000519481 FKBP4Q02790 459 aaKnown RBP eCLIP14.27□□□□□ -0.13
PVT1-208ENST00000519481 TTLL7Q6ZT98 887 aa14.27□□□□□ -0.13
PVT1-208ENST00000519481 C7orf43Q8WVR3 580 aa14.27□□□□□ -0.13
PVT1-208ENST00000519481 ZBTB3Q9H5J0 574 aa14.27□□□□□ -0.13
PVT1-208ENST00000519481 BABAM1Q9NWV8 329 aa14.27□□□□□ -0.13
PVT1-208ENST00000519481 KDM3BQ7LBC6 1761 aa14.27□□□□□ -0.13
PVT1-208ENST00000519481 DICER1Q9UPY3 1922 aaKnown RBP14.26□□□□□ -0.13
PVT1-208ENST00000519481 IQCA1LA6NCM1 817 aa14.26□□□□□ -0.13
PVT1-208ENST00000519481 HTRA3P83110 453 aa14.26□□□□□ -0.13
PVT1-208ENST00000519481 DDX10Q13206 875 aaKnown RBP14.26□□□□□ -0.13
PVT1-208ENST00000519481 CNKSR2Q8WXI2 1034 aa14.26□□□□□ -0.13
PVT1-208ENST00000519481 RPGRQ92834 1020 aaKnown RBP14.26□□□□□ -0.13
PVT1-208ENST00000519481 CACNA1SQ13698 1873 aa14.25□□□□□ -0.13
PVT1-208ENST00000519481 ARFGEF2Q9Y6D5 1785 aa14.25□□□□□ -0.13
PVT1-208ENST00000519481 MYBBP1AQ9BQG0 1328 aaKnown RBP14.25□□□□□ -0.13
PVT1-208ENST00000519481 DDNO94850 711 aaPredicted RBP14.25□□□□□ -0.13
PVT1-208ENST00000519481 EIF2S2P20042 333 aaKnown RBP14.25□□□□□ -0.13
PVT1-208ENST00000519481 GPTP24298 496 aa14.25□□□□□ -0.13
PVT1-208ENST00000519481 TMPOP42166 694 aaKnown RBP14.25□□□□□ -0.13
PVT1-208ENST00000519481 WDR43Q15061 677 aaKnown RBP eCLIP14.25□□□□□ -0.13
PVT1-208ENST00000519481 CC2D2BQ6DHV5 1058 aa14.25□□□□□ -0.13
PVT1-208ENST00000519481 PPP1R42Q7Z4L9 355 aa14.25□□□□□ -0.13
PVT1-208ENST00000519481 NUTM1Q86Y26 1132 aa14.25□□□□□ -0.13
PVT1-208ENST00000519481 IBTKQ9P2D0 1353 aaPredicted RBP14.24□□□□□ -0.13
PVT1-208ENST00000519481 POTECB2RU33 542 aa14.24□□□□□ -0.13
PVT1-208ENST00000519481 PARP10Q53GL7 1025 aa14.24□□□□□ -0.13
PVT1-208ENST00000519481 GIGYF2Q6Y7W6 1299 aaKnown RBP14.24□□□□□ -0.13
PVT1-208ENST00000519481 TMX4Q9H1E5 349 aaPredicted RBP14.24□□□□□ -0.13
PVT1-208ENST00000519481 ZNF277Q9NRM2 450 aaPredicted RBP14.24□□□□□ -0.13
PVT1-208ENST00000519481 NEUROD2Q15784 382 aa14.23□□□□□ -0.13
PVT1-208ENST00000519481 CRY2Q49AN0 593 aa14.23□□□□□ -0.13
PVT1-208ENST00000519481 GRIPAP1Q4V328 841 aa14.23□□□□□ -0.13
PVT1-208ENST00000519481 CHADLQ6NUI6 762 aa14.23□□□□□ -0.13
PVT1-208ENST00000519481 SYNE4Q8N205 404 aa14.23□□□□□ -0.13
PVT1-208ENST00000519481 JMYQ8N9B5 988 aa14.23□□□□□ -0.13
PVT1-208ENST00000519481 ABCC12Q96J65 1359 aa14.22□□□□□ -0.13
PVT1-208ENST00000519481 IARSP41252 1262 aaKnown RBP14.22□□□□□ -0.13
PVT1-208ENST00000519481 SUSD4Q5VX71 490 aa14.22□□□□□ -0.13
PVT1-208ENST00000519481 ZNF34Q8IZ26 560 aa14.22□□□□□ -0.13
PVT1-208ENST00000519481 JDP2Q8WYK2 163 aa14.22□□□□□ -0.13
PVT1-208ENST00000519481 RBM17Q96I25 401 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms