RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 PALLDQ8WX93 1383 aa18.78■□□□□ 0.6
TRAPPC9-205ENST00000518839 BTAF1O14981 1849 aa18.77■□□□□ 0.6
TRAPPC9-205ENST00000518839 GRM8O00222 908 aa18.77■□□□□ 0.6
TRAPPC9-205ENST00000518839 PIP4K2AP48426 406 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC9-205ENST00000518839 CHD1LQ86WJ1 897 aa18.77■□□□□ 0.6
TRAPPC9-205ENST00000518839 MYD88Q99836 296 aa18.77■□□□□ 0.6
TRAPPC9-205ENST00000518839 NEURL1BA8MQ27 555 aa18.76■□□□□ 0.59
TRAPPC9-205ENST00000518839 ZNF772Q68DY9 489 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC9-205ENST00000518839 KIF6Q6ZMV9 814 aa18.76■□□□□ 0.59
TRAPPC9-205ENST00000518839 COL5A3P25940 1745 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC9-205ENST00000518839 LOC102724428A0A0B4J2F2 783 aa18.75■□□□□ 0.59
TRAPPC9-205ENST00000518839 IGKV5-2P06315 115 aa18.75■□□□□ 0.59
TRAPPC9-205ENST00000518839 NBPF7P0C2Y1 421 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC9-205ENST00000518839 SIK1P57059 783 aa18.75■□□□□ 0.59
TRAPPC9-205ENST00000518839 CWF19L2Q2TBE0 894 aaKnown RBP18.75■□□□□ 0.59
TRAPPC9-205ENST00000518839 ANKRD45Q5TZF3 282 aa18.75■□□□□ 0.59
TRAPPC9-205ENST00000518839 NPM2Q86SE8 214 aaKnown RBP18.75■□□□□ 0.59
TRAPPC9-205ENST00000518839 SEPT12Q8IYM1 358 aa18.75■□□□□ 0.59
TRAPPC9-205ENST00000518839 SLC4A9Q96Q91 983 aa18.75■□□□□ 0.59
TRAPPC9-205ENST00000518839 COL15A1P39059 1388 aa18.74■□□□□ 0.59
TRAPPC9-205ENST00000518839 ATP6V1AP38606 617 aa18.74■□□□□ 0.59
TRAPPC9-205ENST00000518839 IL6STP40189 918 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC9-205ENST00000518839 MTX1Q13505 466 aa18.74■□□□□ 0.59
TRAPPC9-205ENST00000518839 GCKRQ14397 625 aa18.74■□□□□ 0.59
TRAPPC9-205ENST00000518839 SKAP1Q86WV1 359 aa18.74■□□□□ 0.59
TRAPPC9-205ENST00000518839 ANKRD36CQ5JPF3 1778 aa18.73■□□□□ 0.59
TRAPPC9-205ENST00000518839 TTLL7Q6ZT98 887 aa18.73■□□□□ 0.59
TRAPPC9-205ENST00000518839 SSH3Q8TE77 659 aa18.73■□□□□ 0.59
TRAPPC9-205ENST00000518839 KCNQ2O43526 872 aa18.72■□□□□ 0.59
TRAPPC9-205ENST00000518839 POLA2Q14181 598 aa18.72■□□□□ 0.59
TRAPPC9-205ENST00000518839 FAM161AQ3B820 660 aa18.72■□□□□ 0.59
TRAPPC9-205ENST00000518839 HSP90AB3PQ58FF7 597 aa18.72■□□□□ 0.59
TRAPPC9-205ENST00000518839 PDE4AP27815 886 aa18.71■□□□□ 0.59
TRAPPC9-205ENST00000518839 HSP90AB4PQ58FF6 505 aa18.71■□□□□ 0.59
TRAPPC9-205ENST00000518839 CCDC191Q8NCU4 936 aa18.71■□□□□ 0.59
TRAPPC9-205ENST00000518839 LNPKQ9C0E8 428 aa18.71■□□□□ 0.59
TRAPPC9-205ENST00000518839 CCDC87Q9NVE4 849 aa18.71■□□□□ 0.59
TRAPPC9-205ENST00000518839 LY75O60449 1722 aa18.71■□□□□ 0.59
TRAPPC9-205ENST00000518839 MAP3K15Q6ZN16 1313 aa18.71■□□□□ 0.59
TRAPPC9-205ENST00000518839 BRWD3Q6RI45 1802 aa18.7■□□□□ 0.58
TRAPPC9-205ENST00000518839 PNMA6EA0A0J9YXQ4 647 aa18.7■□□□□ 0.58
TRAPPC9-205ENST00000518839 PPP1R42Q7Z4L9 355 aa18.7■□□□□ 0.58
TRAPPC9-205ENST00000518839 BACH2Q9BYV9 841 aa18.7■□□□□ 0.58
TRAPPC9-205ENST00000518839 CWC25Q9NXE8 425 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC9-205ENST00000518839 ZBTB1Q9Y2K1 713 aa18.7■□□□□ 0.58
TRAPPC9-205ENST00000518839 NUP98P52948 1817 aa18.7■□□□□ 0.58
TRAPPC9-205ENST00000518839 ERVV-1B6SEH8 477 aa18.69■□□□□ 0.58
TRAPPC9-205ENST00000518839 SRGAP3O43295 1099 aa18.69■□□□□ 0.58
TRAPPC9-205ENST00000518839 RAB11FIP3O75154 756 aa18.69■□□□□ 0.58
TRAPPC9-205ENST00000518839 TRIM28Q13263 835 aaKnown RBP18.69■□□□□ 0.58
TRAPPC9-205ENST00000518839 TCIRG1Q13488 830 aa18.69■□□□□ 0.58
TRAPPC9-205ENST00000518839 ZBTB3Q9H5J0 574 aa18.69■□□□□ 0.58
TRAPPC9-205ENST00000518839 ZNF330Q9Y3S2 320 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC9-205ENST00000518839 CRKLP46109 303 aaKnown RBP18.68■□□□□ 0.58
TRAPPC9-205ENST00000518839 RBM6P78332 1123 aaKnown RBP18.68■□□□□ 0.58
TRAPPC9-205ENST00000518839 SUCLG2Q96I99 432 aa18.68■□□□□ 0.58
TRAPPC9-205ENST00000518839 ISCA1Q9BUE6 129 aa18.68■□□□□ 0.58
TRAPPC9-205ENST00000518839 MYH14Q7Z406 1995 aaKnown RBP18.68■□□□□ 0.58
TRAPPC9-205ENST00000518839 A0A087WZG4 1122 aa18.67■□□□□ 0.58
TRAPPC9-205ENST00000518839 ATP5J2-PTCD1G3V325 749 aa18.67■□□□□ 0.58
TRAPPC9-205ENST00000518839 EIF5P55010 431 aaKnown RBP18.67■□□□□ 0.58
TRAPPC9-205ENST00000518839 ITPK1Q13572 414 aa18.67■□□□□ 0.58
TRAPPC9-205ENST00000518839 GIGYF2Q6Y7W6 1299 aaKnown RBP18.67■□□□□ 0.58
TRAPPC9-205ENST00000518839 RBM19Q9Y4C8 960 aaKnown RBP18.67■□□□□ 0.58
TRAPPC9-205ENST00000518839 H7C1W4 665 aa18.66■□□□□ 0.58
TRAPPC9-205ENST00000518839 INTS5Q6P9B9 1019 aaKnown RBP18.66■□□□□ 0.58
TRAPPC9-205ENST00000518839 FAM196AQ6ZSG2 479 aa18.66■□□□□ 0.58
TRAPPC9-205ENST00000518839 LRRCC1Q9C099 1032 aa18.66■□□□□ 0.58
TRAPPC9-205ENST00000518839 HMGB2P26583 209 aaKnown RBP18.65■□□□□ 0.58
TRAPPC9-205ENST00000518839 KRT27Q7Z3Y8 459 aa18.65■□□□□ 0.58
TRAPPC9-205ENST00000518839 DZIP3Q86Y13 1208 aaKnown RBP18.65■□□□□ 0.58
TRAPPC9-205ENST00000518839 BCL11BQ9C0K0 894 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC9-205ENST00000518839 BICC1Q9H694 974 aaKnown RBP18.65■□□□□ 0.58
TRAPPC9-205ENST00000518839 NOP58Q9Y2X3 529 aaKnown RBP18.65■□□□□ 0.58
TRAPPC9-205ENST00000518839 CNTNAP4Q9C0A0 1308 aa18.65■□□□□ 0.58
TRAPPC9-205ENST00000518839 TAF1LQ8IZX4 1826 aa18.65■□□□□ 0.58
TRAPPC9-205ENST00000518839 BCORQ6W2J9 1755 aa18.64■□□□□ 0.57
TRAPPC9-205ENST00000518839 SURF6O75683 361 aaKnown RBP18.64■□□□□ 0.57
TRAPPC9-205ENST00000518839 RC3H1Q5TC82 1133 aaKnown RBP18.64■□□□□ 0.57
TRAPPC9-205ENST00000518839 UBE3BQ7Z3V4 1068 aa18.64■□□□□ 0.57
TRAPPC9-205ENST00000518839 ERC1Q8IUD2 1116 aa18.64■□□□□ 0.57
TRAPPC9-205ENST00000518839 FBXO41Q8TF61 875 aa18.64■□□□□ 0.57
TRAPPC9-205ENST00000518839 ARXQ96QS3 562 aa18.64■□□□□ 0.57
TRAPPC9-205ENST00000518839 EXOC6BQ9Y2D4 811 aa18.64■□□□□ 0.57
TRAPPC9-205ENST00000518839 CASP7P55210 303 aa18.63■□□□□ 0.57
TRAPPC9-205ENST00000518839 C8orf34Q49A92 452 aa18.63■□□□□ 0.57
TRAPPC9-205ENST00000518839 KIF1BPQ96EK5 621 aa18.63■□□□□ 0.57
TRAPPC9-205ENST00000518839 KAZALD1Q96I82 304 aa18.63■□□□□ 0.57
TRAPPC9-205ENST00000518839 RGL2O15211 777 aa18.62■□□□□ 0.57
TRAPPC9-205ENST00000518839 RABL6Q3YEC7 729 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC9-205ENST00000518839 BMP2KLQ5H9B9 411 aa18.62■□□□□ 0.57
TRAPPC9-205ENST00000518839 PCCAP05165 728 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC9-205ENST00000518839 APBB1O00213 710 aa18.6■□□□□ 0.57
TRAPPC9-205ENST00000518839 FAM182BQ5T319 152 aa18.6■□□□□ 0.57
TRAPPC9-205ENST00000518839 PLEKHM2Q8IWE5 1019 aa18.6■□□□□ 0.57
TRAPPC9-205ENST00000518839 LINC00116Q8NCU8 138 aa18.6■□□□□ 0.57
TRAPPC9-205ENST00000518839 CCNL1Q9UK58 526 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC9-205ENST00000518839 ZNF652Q9Y2D9 606 aa18.6■□□□□ 0.57
TRAPPC9-205ENST00000518839 MYH3P11055 1940 aa18.6■□□□□ 0.57
TRAPPC9-205ENST00000518839 CDHR2Q9BYE9 1310 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms