RNA–Protein interactions for RNA: ENST00000518531.5

TNFRSF10B-203, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 3

Gene TNFRSF10B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-203ENST00000518531 NPHP1O15259 732 aa21.17■□□□□ 0.98
TNFRSF10B-203ENST00000518531 FMNL2Q96PY5 1086 aa21.17■□□□□ 0.98
TNFRSF10B-203ENST00000518531 PER1O15534 1290 aaPredicted RBP21.16■□□□□ 0.98
TNFRSF10B-203ENST00000518531 ST5P78524 1137 aa21.16■□□□□ 0.98
TNFRSF10B-203ENST00000518531 GAS2L2Q8NHY3 880 aa21.16■□□□□ 0.98
TNFRSF10B-203ENST00000518531 U2SURPO15042 1029 aaKnown RBP21.15■□□□□ 0.98
TNFRSF10B-203ENST00000518531 SOGA3Q5TF21 947 aa21.15■□□□□ 0.98
TNFRSF10B-203ENST00000518531 NPM2Q86SE8 214 aaKnown RBP21.15■□□□□ 0.98
TNFRSF10B-203ENST00000518531 MASTLQ96GX5 879 aa21.15■□□□□ 0.98
TNFRSF10B-203ENST00000518531 CEMIPQ8WUJ3 1361 aa21.14■□□□□ 0.98
TNFRSF10B-203ENST00000518531 KCNQ3O43525 872 aa21.14■□□□□ 0.97
TNFRSF10B-203ENST00000518531 DZIP3Q86Y13 1208 aaKnown RBP21.14■□□□□ 0.97
TNFRSF10B-203ENST00000518531 CNTNAP1P78357 1384 aa21.13■□□□□ 0.97
TNFRSF10B-203ENST00000518531 PASKQ96RG2 1323 aa21.13■□□□□ 0.97
TNFRSF10B-203ENST00000518531 IQCA1LA6NCM1 817 aa21.12■□□□□ 0.97
TNFRSF10B-203ENST00000518531 PIP4K2AP48426 406 aaPredicted RBP21.12■□□□□ 0.97
TNFRSF10B-203ENST00000518531 LDHDQ86WU2 507 aa21.12■□□□□ 0.97
TNFRSF10B-203ENST00000518531 L3MBTL3Q96JM7 780 aaPredicted RBP21.12■□□□□ 0.97
TNFRSF10B-203ENST00000518531 FOXN1O15353 648 aa21.11■□□□□ 0.97
TNFRSF10B-203ENST00000518531 CCER1Q8TC90 406 aaPredicted RBP21.11■□□□□ 0.97
TNFRSF10B-203ENST00000518531 C7orf43Q8WVR3 580 aa21.11■□□□□ 0.97
TNFRSF10B-203ENST00000518531 TAF1DQ9H5J8 278 aaPredicted RBP21.11■□□□□ 0.97
TNFRSF10B-203ENST00000518531 SCN4AP35499 1836 aa21.11■□□□□ 0.97
TNFRSF10B-203ENST00000518531 BTBD11A6QL63 1104 aa21.1■□□□□ 0.97
TNFRSF10B-203ENST00000518531 CCDC93Q567U6 631 aa21.1■□□□□ 0.97
TNFRSF10B-203ENST00000518531 NBPF5PQ86XG9 351 aaPredicted RBP21.1■□□□□ 0.97
TNFRSF10B-203ENST00000518531 USP16Q9Y5T5 823 aa21.09■□□□□ 0.97
TNFRSF10B-203ENST00000518531 ZNF541Q9H0D2 1346 aa21.08■□□□□ 0.97
TNFRSF10B-203ENST00000518531 PRAMEF22A3QJZ6 481 aa21.08■□□□□ 0.97
TNFRSF10B-203ENST00000518531 CNGB1Q14028 1251 aaPredicted RBP21.08■□□□□ 0.97
TNFRSF10B-203ENST00000518531 CLEC4GQ6UXB4 293 aa21.08■□□□□ 0.97
TNFRSF10B-203ENST00000518531 PHACTR3Q96KR7 559 aa21.08■□□□□ 0.97
TNFRSF10B-203ENST00000518531 ZNF277Q9NRM2 450 aaPredicted RBP21.08■□□□□ 0.97
TNFRSF10B-203ENST00000518531 NPR1P16066 1061 aa21.07■□□□□ 0.96
TNFRSF10B-203ENST00000518531 FKBP4Q02790 459 aaKnown RBP eCLIP21.07■□□□□ 0.96
TNFRSF10B-203ENST00000518531 NPC1L1Q9UHC9 1359 aa21.07■□□□□ 0.96
TNFRSF10B-203ENST00000518531 ADAMTSL1Q8N6G6 1762 aa21.06■□□□□ 0.96
TNFRSF10B-203ENST00000518531 ITGBL1O95965 494 aaPredicted RBP21.06■□□□□ 0.96
TNFRSF10B-203ENST00000518531 VEGFBP49765 207 aa21.06■□□□□ 0.96
TNFRSF10B-203ENST00000518531 EAPPQ56P03 285 aaPredicted RBP21.06■□□□□ 0.96
TNFRSF10B-203ENST00000518531 OLFM4Q6UX06 510 aa21.06■□□□□ 0.96
TNFRSF10B-203ENST00000518531 PRDM10Q9NQV6 1147 aa21.06■□□□□ 0.96
TNFRSF10B-203ENST00000518531 ZNF652Q9Y2D9 606 aa21.06■□□□□ 0.96
TNFRSF10B-203ENST00000518531 KLRG2A4D1S0 409 aaPredicted RBP21.05■□□□□ 0.96
TNFRSF10B-203ENST00000518531 TMEM88BA6NKF7 163 aa21.05■□□□□ 0.96
TNFRSF10B-203ENST00000518531 PRKAR2BP31323 418 aa21.05■□□□□ 0.96
TNFRSF10B-203ENST00000518531 RSPH6AQ9H0K4 717 aa21.04■□□□□ 0.96
TNFRSF10B-203ENST00000518531 HACL1Q9UJ83 578 aa21.04■□□□□ 0.96
TNFRSF10B-203ENST00000518531 SNRPA1P09661 255 aaKnown RBP21.03■□□□□ 0.96
TNFRSF10B-203ENST00000518531 CTCFP49711 727 aaPredicted RBP21.03■□□□□ 0.96
TNFRSF10B-203ENST00000518531 AIDAQ96BJ3 306 aa21.03■□□□□ 0.96
TNFRSF10B-203ENST00000518531 NIP7Q9Y221 180 aaKnown RBP eCLIP21.03■□□□□ 0.96
TNFRSF10B-203ENST00000518531 CLEC11AQ9Y240 323 aa21.03■□□□□ 0.96
TNFRSF10B-203ENST00000518531 NBPF26B4DH59 902 aa21.02■□□□□ 0.96
TNFRSF10B-203ENST00000518531 EPHX2P34913 555 aa21.02■□□□□ 0.96
TNFRSF10B-203ENST00000518531 NBPF10Q6P3W6 841 aaKnown RBP21.02■□□□□ 0.96
TNFRSF10B-203ENST00000518531 TPTE2Q6XPS3 522 aa21.02■□□□□ 0.96
TNFRSF10B-203ENST00000518531 RTKN2Q8IZC4 609 aa21.02■□□□□ 0.96
TNFRSF10B-203ENST00000518531 NBPF15Q8N660 670 aa21.02■□□□□ 0.96
TNFRSF10B-203ENST00000518531 RNF123Q5XPI4 1314 aa21.02■□□□□ 0.95
TNFRSF10B-203ENST00000518531 FAM177BA6PVY3 158 aa21.01■□□□□ 0.95
TNFRSF10B-203ENST00000518531 MCM10Q7L590 875 aa21.01■□□□□ 0.95
TNFRSF10B-203ENST00000518531 WBP1LQ9NX94 342 aa21.01■□□□□ 0.95
TNFRSF10B-203ENST00000518531 FZD9O00144 591 aa21■□□□□ 0.95
TNFRSF10B-203ENST00000518531 IARSP41252 1262 aaKnown RBP21■□□□□ 0.95
TNFRSF10B-203ENST00000518531 SNED1Q8TER0 1413 aa20.99■□□□□ 0.95
TNFRSF10B-203ENST00000518531 RGL2O15211 777 aa20.99■□□□□ 0.95
TNFRSF10B-203ENST00000518531 MAP1SQ66K74 1059 aaPredicted RBP20.99■□□□□ 0.95
TNFRSF10B-203ENST00000518531 PNMA8AQ86V59 439 aaPredicted RBP20.99■□□□□ 0.95
TNFRSF10B-203ENST00000518531 SYNE4Q8N205 404 aa20.99■□□□□ 0.95
TNFRSF10B-203ENST00000518531 RASSF10A6NK89 507 aa20.98■□□□□ 0.95
TNFRSF10B-203ENST00000518531 LBX1P52954 281 aa20.98■□□□□ 0.95
TNFRSF10B-203ENST00000518531 HLFQ16534 295 aa20.98■□□□□ 0.95
TNFRSF10B-203ENST00000518531 CNTROBQ8N137 903 aa20.98■□□□□ 0.95
TNFRSF10B-203ENST00000518531 ALDH1B1P30837 517 aa20.97■□□□□ 0.95
TNFRSF10B-203ENST00000518531 GPC2Q8N158 579 aa20.97■□□□□ 0.95
TNFRSF10B-203ENST00000518531 RTF1Q92541 710 aaKnown RBP20.97■□□□□ 0.95
TNFRSF10B-203ENST00000518531 CFAP53Q96M91 514 aa20.97■□□□□ 0.95
TNFRSF10B-203ENST00000518531 COL4A5P29400 1685 aa20.96■□□□□ 0.95
TNFRSF10B-203ENST00000518531 DCTN1Q14203 1278 aa20.96■□□□□ 0.95
TNFRSF10B-203ENST00000518531 DEFB115Q30KQ5 88 aa20.96■□□□□ 0.95
TNFRSF10B-203ENST00000518531 ABCC12Q96J65 1359 aa20.96■□□□□ 0.95
TNFRSF10B-203ENST00000518531 GTF2E1P29083 439 aaPredicted RBP20.95■□□□□ 0.94
TNFRSF10B-203ENST00000518531 PSMD1Q99460 953 aa20.95■□□□□ 0.94
TNFRSF10B-203ENST00000518531 LAMB4A4D0S4 1761 aa20.95■□□□□ 0.94
TNFRSF10B-203ENST00000518531 U2AF1L5P0DN76 240 aaPredicted RBP20.94■□□□□ 0.94
TNFRSF10B-203ENST00000518531 HSPA8P11142 646 aaKnown RBP20.94■□□□□ 0.94
TNFRSF10B-203ENST00000518531 U2AF1Q01081 240 aaKnown RBP eCLIP20.94■□□□□ 0.94
TNFRSF10B-203ENST00000518531 LTBP1Q14766 1721 aa20.94■□□□□ 0.94
TNFRSF10B-203ENST00000518531 CRY2Q49AN0 593 aa20.93■□□□□ 0.94
TNFRSF10B-203ENST00000518531 JDP2Q8WYK2 163 aa20.93■□□□□ 0.94
TNFRSF10B-203ENST00000518531 ABT1Q9ULW3 272 aaKnown RBP20.93■□□□□ 0.94
TNFRSF10B-203ENST00000518531 NUDCQ9Y266 331 aa20.93■□□□□ 0.94
TNFRSF10B-203ENST00000518531 WDR33Q9C0J8 1336 aaKnown RBP20.93■□□□□ 0.94
TNFRSF10B-203ENST00000518531 NUTM1Q86Y26 1132 aa20.92■□□□□ 0.94
TNFRSF10B-203ENST00000518531 GJA3Q9Y6H8 435 aa20.92■□□□□ 0.94
TNFRSF10B-203ENST00000518531 THSD7BQ9C0I4 1608 aa20.91■□□□□ 0.94
TNFRSF10B-203ENST00000518531 NYXQ9GZU5 481 aa20.91■□□□□ 0.94
TNFRSF10B-203ENST00000518531 DDX21Q9NR30 783 aaKnown RBP eCLIP20.91■□□□□ 0.94
TNFRSF10B-203ENST00000518531 HTATSF1O43719 755 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms