RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 NINLQ9Y2I6 1382 aa8.43□□□□□ -1.06
MRPS28-203ENST00000518371 TTC24A2A3L6 582 aaPredicted RBP8.42□□□□□ -1.06
MRPS28-203ENST00000518371 LORP23490 312 aaPredicted RBP8.42□□□□□ -1.06
MRPS28-203ENST00000518371 VPS72Q15906 364 aa8.42□□□□□ -1.06
MRPS28-203ENST00000518371 USP19O94966 1318 aa8.42□□□□□ -1.06
MRPS28-203ENST00000518371 SSH2Q76I76 1423 aa8.42□□□□□ -1.06
MRPS28-203ENST00000518371 BCL9LQ86UU0 1499 aa8.42□□□□□ -1.06
MRPS28-203ENST00000518371 TOPAZ1Q8N9V7 1692 aa8.42□□□□□ -1.06
MRPS28-203ENST00000518371 TRPM3Q9HCF6 1732 aaPredicted RBP8.42□□□□□ -1.06
MRPS28-203ENST00000518371 A0A1W2PP64 1363 aa8.41□□□□□ -1.06
MRPS28-203ENST00000518371 SULF1Q8IWU6 871 aa8.41□□□□□ -1.06
MRPS28-203ENST00000518371 ZSCAN1Q8NBB4 408 aa8.41□□□□□ -1.06
MRPS28-203ENST00000518371 THAP11Q96EK4 314 aa8.41□□□□□ -1.06
MRPS28-203ENST00000518371 COG3Q96JB2 828 aa8.41□□□□□ -1.06
MRPS28-203ENST00000518371 SPSB2Q99619 263 aa8.41□□□□□ -1.06
MRPS28-203ENST00000518371 SLC27A5Q9Y2P5 690 aa8.41□□□□□ -1.06
MRPS28-203ENST00000518371 SLIT2O94813 1529 aa8.4□□□□□ -1.06
MRPS28-203ENST00000518371 ATRNO75882 1429 aa8.4□□□□□ -1.06
MRPS28-203ENST00000518371 EDC4Q6P2E9 1401 aaKnown RBP8.4□□□□□ -1.06
MRPS28-203ENST00000518371 ANKRD36BQ8N2N9 1353 aa8.4□□□□□ -1.06
MRPS28-203ENST00000518371 SLC16A10Q8TF71 515 aa8.4□□□□□ -1.06
MRPS28-203ENST00000518371 ALS2Q96Q42 1657 aa8.4□□□□□ -1.07
MRPS28-203ENST00000518371 CD163L1Q9NR16 1453 aa8.39□□□□□ -1.07
MRPS28-203ENST00000518371 USP31Q70CQ4 1352 aa8.39□□□□□ -1.07
MRPS28-203ENST00000518371 ATP6V1AP38606 617 aa8.39□□□□□ -1.07
MRPS28-203ENST00000518371 ARHGEF25Q86VW2 580 aa8.39□□□□□ -1.07
MRPS28-203ENST00000518371 CCDC102AQ96A19 550 aa8.39□□□□□ -1.07
MRPS28-203ENST00000518371 GGNBP2Q9H3C7 697 aa8.39□□□□□ -1.07
MRPS28-203ENST00000518371 USP35Q9P2H5 1018 aa8.39□□□□□ -1.07
MRPS28-203ENST00000518371 CPDO75976 1380 aa8.38□□□□□ -1.07
MRPS28-203ENST00000518371 FYB1O15117 783 aa8.38□□□□□ -1.07
MRPS28-203ENST00000518371 CSB-PGBD3P0DP91 1061 aa8.38□□□□□ -1.07
MRPS28-203ENST00000518371 CD46P15529 392 aa8.38□□□□□ -1.07
MRPS28-203ENST00000518371 SMPD1P17405 629 aa8.38□□□□□ -1.07
MRPS28-203ENST00000518371 MDM2Q00987 491 aaPredicted RBP8.38□□□□□ -1.07
MRPS28-203ENST00000518371 SEPT12Q8IYM1 358 aa8.38□□□□□ -1.07
MRPS28-203ENST00000518371 FAM160A2Q8N612 972 aaPredicted RBP8.38□□□□□ -1.07
MRPS28-203ENST00000518371 CARD14Q9BXL6 1004 aa8.38□□□□□ -1.07
MRPS28-203ENST00000518371 PANK3Q9H999 370 aa8.38□□□□□ -1.07
MRPS28-203ENST00000518371 FCF1Q9Y324 198 aaKnown RBP8.38□□□□□ -1.07
MRPS28-203ENST00000518371 AATKQ6ZMQ8 1374 aa8.37□□□□□ -1.07
MRPS28-203ENST00000518371 SPATA31A5Q5VU36 1347 aa8.37□□□□□ -1.07
MRPS28-203ENST00000518371 SPATA31A7Q8IWB4 1347 aa8.37□□□□□ -1.07
MRPS28-203ENST00000518371 GMPRP36959 345 aa8.37□□□□□ -1.07
MRPS28-203ENST00000518371 LARP1Q6PKG0 1096 aaKnown RBP8.37□□□□□ -1.07
MRPS28-203ENST00000518371 TOM1L2Q6ZVM7 507 aa8.37□□□□□ -1.07
MRPS28-203ENST00000518371 KIFC2Q96AC6 838 aa8.37□□□□□ -1.07
MRPS28-203ENST00000518371 AMPHP49418 695 aa8.36□□□□□ -1.07
MRPS28-203ENST00000518371 RNF19BQ6ZMZ0 732 aa8.36□□□□□ -1.07
MRPS28-203ENST00000518371 PRDM9Q9NQV7 894 aa8.36□□□□□ -1.07
MRPS28-203ENST00000518371 CDK12Q9NYV4 1490 aaPredicted RBP8.36□□□□□ -1.07
MRPS28-203ENST00000518371 COL14A1Q05707 1796 aaKnown RBP8.35□□□□□ -1.07
MRPS28-203ENST00000518371 CGNL1Q0VF96 1302 aa8.35□□□□□ -1.07
MRPS28-203ENST00000518371 KIF7Q2M1P5 1343 aa8.35□□□□□ -1.07
MRPS28-203ENST00000518371 SPATA31A1Q5TZJ5 1347 aa8.35□□□□□ -1.07
MRPS28-203ENST00000518371 FBLN1P23142 703 aa8.35□□□□□ -1.07
MRPS28-203ENST00000518371 BRICD5Q6PL45 260 aa8.35□□□□□ -1.07
MRPS28-203ENST00000518371 TCP11L2Q8N4U5 519 aa8.35□□□□□ -1.07
MRPS28-203ENST00000518371 SNIP1Q8TAD8 396 aaKnown RBP8.35□□□□□ -1.07
MRPS28-203ENST00000518371 HLA-CQ95604 372 aa8.35□□□□□ -1.07
MRPS28-203ENST00000518371 KNSTRNQ9Y448 316 aa8.35□□□□□ -1.07
MRPS28-203ENST00000518371 SALL2Q9Y467 1007 aaPredicted RBP8.35□□□□□ -1.07
MRPS28-203ENST00000518371 RGS12O14924 1447 aa8.35□□□□□ -1.07
MRPS28-203ENST00000518371 NSD3Q9BZ95 1437 aa8.35□□□□□ -1.07
MRPS28-203ENST00000518371 MARF1Q9Y4F3 1742 aaKnown RBP8.34□□□□□ -1.07
MRPS28-203ENST00000518371 SLIT3O75094 1523 aa8.34□□□□□ -1.07
MRPS28-203ENST00000518371 FMNL1O95466 1100 aaPredicted RBP8.34□□□□□ -1.07
MRPS28-203ENST00000518371 KRT27Q7Z3Y8 459 aa8.34□□□□□ -1.07
MRPS28-203ENST00000518371 IP6K1Q92551 441 aa8.34□□□□□ -1.07
MRPS28-203ENST00000518371 LTV1Q96GA3 475 aaPredicted RBP8.34□□□□□ -1.07
MRPS28-203ENST00000518371 NLRP2Q9NX02 1062 aa8.34□□□□□ -1.07
MRPS28-203ENST00000518371 NXF1Q9UBU9 619 aaKnown RBP8.34□□□□□ -1.07
MRPS28-203ENST00000518371 THRAP3Q9Y2W1 955 aaKnown RBP8.34□□□□□ -1.07
MRPS28-203ENST00000518371 AKAP12Q02952 1782 aa8.34□□□□□ -1.07
MRPS28-203ENST00000518371 PIK3C2AO00443 1686 aa8.34□□□□□ -1.08
MRPS28-203ENST00000518371 CAMTA1Q9Y6Y1 1673 aa8.34□□□□□ -1.08
MRPS28-203ENST00000518371 WDR17Q8IZU2 1322 aa8.33□□□□□ -1.08
MRPS28-203ENST00000518371 ZMYND10O75800 440 aa8.33□□□□□ -1.08
MRPS28-203ENST00000518371 ZEB1P37275 1124 aaPredicted RBP8.33□□□□□ -1.08
MRPS28-203ENST00000518371 TNNT2P45379 298 aaPredicted RBP8.33□□□□□ -1.08
MRPS28-203ENST00000518371 PDE3BQ13370 1112 aa8.33□□□□□ -1.08
MRPS28-203ENST00000518371 RRS1Q15050 365 aaKnown RBP8.33□□□□□ -1.08
MRPS28-203ENST00000518371 BARGINQ6ZT62 677 aa8.33□□□□□ -1.08
MRPS28-203ENST00000518371 NRKQ7Z2Y5 1582 aa8.33□□□□□ -1.08
MRPS28-203ENST00000518371 ANKRD24Q8TF21 1146 aa8.33□□□□□ -1.08
MRPS28-203ENST00000518371 ABCA3Q99758 1704 aa8.33□□□□□ -1.08
MRPS28-203ENST00000518371 PHRF1Q9P1Y6 1649 aaKnown RBP8.32□□□□□ -1.08
MRPS28-203ENST00000518371 MAP3K19Q56UN5 1328 aa8.32□□□□□ -1.08
MRPS28-203ENST00000518371 MON2Q7Z3U7 1717 aa8.32□□□□□ -1.08
MRPS28-203ENST00000518371 OVOS2A0A0J9YW53 1432 aa8.32□□□□□ -1.08
MRPS28-203ENST00000518371 OVOS2Q6IE36 1432 aa8.32□□□□□ -1.08
MRPS28-203ENST00000518371 WNT7AO00755 349 aa8.32□□□□□ -1.08
MRPS28-203ENST00000518371 PPM1GO15355 546 aaPredicted RBP8.32□□□□□ -1.08
MRPS28-203ENST00000518371 HOXC9P31274 260 aa8.32□□□□□ -1.08
MRPS28-203ENST00000518371 MORC1Q86VD1 984 aa8.32□□□□□ -1.08
MRPS28-203ENST00000518371 REPIN1Q9BWE0 567 aaKnown RBP8.32□□□□□ -1.08
MRPS28-203ENST00000518371 CARD10Q9BWT7 1032 aa8.32□□□□□ -1.08
MRPS28-203ENST00000518371 PLCH1Q4KWH8 1693 aa8.32□□□□□ -1.08
MRPS28-203ENST00000518371 COL5A2P05997 1499 aaPredicted RBP8.32□□□□□ -1.08
MRPS28-203ENST00000518371 NWD2Q9ULI1 1742 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms