RNA–Protein interactions for RNA: ENST00000518230.5

ARFGEF1-203, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-203ENST00000518230 MTMR6Q9Y217 621 aa11.66□□□□□ -0.54
ARFGEF1-203ENST00000518230 TOPAZ1Q8N9V7 1692 aa11.66□□□□□ -0.54
ARFGEF1-203ENST00000518230 HSP90AB2PQ58FF8 381 aa11.66□□□□□ -0.54
ARFGEF1-203ENST00000518230 SGSM2O43147 1006 aa11.66□□□□□ -0.54
ARFGEF1-203ENST00000518230 LIG1P18858 919 aa11.66□□□□□ -0.54
ARFGEF1-203ENST00000518230 NECAB1Q8N987 351 aa11.66□□□□□ -0.54
ARFGEF1-203ENST00000518230 LSG1Q9H089 658 aaKnown RBP11.66□□□□□ -0.54
ARFGEF1-203ENST00000518230 ATP6V1DQ9Y5K8 247 aa11.66□□□□□ -0.54
ARFGEF1-203ENST00000518230 NRKQ7Z2Y5 1582 aa11.65□□□□□ -0.54
ARFGEF1-203ENST00000518230 RAD50Q92878 1312 aa11.65□□□□□ -0.54
ARFGEF1-203ENST00000518230 TPM3P06753 285 aa11.65□□□□□ -0.54
ARFGEF1-203ENST00000518230 KCNA6P17658 529 aa11.65□□□□□ -0.54
ARFGEF1-203ENST00000518230 ADCK5Q3MIX3 580 aa11.65□□□□□ -0.54
ARFGEF1-203ENST00000518230 OGFRQ9NZT2 677 aa11.65□□□□□ -0.54
ARFGEF1-203ENST00000518230 CGNQ9P2M7 1197 aaKnown RBP11.65□□□□□ -0.54
ARFGEF1-203ENST00000518230 CTNNA3Q9UI47 895 aa11.65□□□□□ -0.54
ARFGEF1-203ENST00000518230 MRVI1Q9Y6F6 885 aa11.65□□□□□ -0.54
ARFGEF1-203ENST00000518230 USP31Q70CQ4 1352 aa11.65□□□□□ -0.54
ARFGEF1-203ENST00000518230 GNAI3P08754 354 aa11.65□□□□□ -0.55
ARFGEF1-203ENST00000518230 TNNT1P13805 278 aa11.65□□□□□ -0.55
ARFGEF1-203ENST00000518230 FLIIQ13045 1269 aa11.65□□□□□ -0.55
ARFGEF1-203ENST00000518230 TTC6Q86TZ1 520 aa11.65□□□□□ -0.55
ARFGEF1-203ENST00000518230 HYPKQ9NX55 129 aa11.65□□□□□ -0.55
ARFGEF1-203ENST00000518230 ZBTB22O15209 634 aa11.64□□□□□ -0.55
ARFGEF1-203ENST00000518230 FGD1P98174 961 aa11.64□□□□□ -0.55
ARFGEF1-203ENST00000518230 TYRO3Q06418 890 aa11.64□□□□□ -0.55
ARFGEF1-203ENST00000518230 FAM200AQ8TCP9 573 aa11.64□□□□□ -0.55
ARFGEF1-203ENST00000518230 ZNF592Q92610 1267 aa11.64□□□□□ -0.55
ARFGEF1-203ENST00000518230 FEZ1Q99689 392 aa11.64□□□□□ -0.55
ARFGEF1-203ENST00000518230 SURF6O75683 361 aaKnown RBP11.64□□□□□ -0.55
ARFGEF1-203ENST00000518230 STK31Q9BXU1 1019 aa11.64□□□□□ -0.55
ARFGEF1-203ENST00000518230 TRIM5Q9C035 493 aa11.64□□□□□ -0.55
ARFGEF1-203ENST00000518230 CRB1P82279 1406 aa11.63□□□□□ -0.55
ARFGEF1-203ENST00000518230 COL9A3Q14050 684 aaPredicted RBP11.63□□□□□ -0.55
ARFGEF1-203ENST00000518230 ANO6Q4KMQ2 910 aa11.63□□□□□ -0.55
ARFGEF1-203ENST00000518230 NGDNQ8NEJ9 315 aaKnown RBP11.63□□□□□ -0.55
ARFGEF1-203ENST00000518230 PI4K2BQ8TCG2 481 aa11.63□□□□□ -0.55
ARFGEF1-203ENST00000518230 BBXQ8WY36 941 aaPredicted RBP11.63□□□□□ -0.55
ARFGEF1-203ENST00000518230 USP44Q9H0E7 712 aa11.63□□□□□ -0.55
ARFGEF1-203ENST00000518230 CBX8Q9HC52 389 aa11.63□□□□□ -0.55
ARFGEF1-203ENST00000518230 TFIP11Q9UBB9 837 aaKnown RBP11.63□□□□□ -0.55
ARFGEF1-203ENST00000518230 PTH1RQ03431 593 aa11.63□□□□□ -0.55
ARFGEF1-203ENST00000518230 ST3GAL1Q11201 340 aa11.63□□□□□ -0.55
ARFGEF1-203ENST00000518230 MAP3K11Q16584 847 aa11.63□□□□□ -0.55
ARFGEF1-203ENST00000518230 MTHFSDQ2M296 383 aaKnown RBP11.63□□□□□ -0.55
ARFGEF1-203ENST00000518230 RTF1Q92541 710 aaKnown RBP11.63□□□□□ -0.55
ARFGEF1-203ENST00000518230 JAKMIP1Q96N16 626 aaKnown RBP11.63□□□□□ -0.55
ARFGEF1-203ENST00000518230 NUP62CLQ9H1M0 184 aa11.63□□□□□ -0.55
ARFGEF1-203ENST00000518230 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.63□□□□□ -0.55
ARFGEF1-203ENST00000518230 V9GYY5 206 aaPredicted RBP11.63□□□□□ -0.55
ARFGEF1-203ENST00000518230 ME3Q16798 604 aa11.62□□□□□ -0.55
ARFGEF1-203ENST00000518230 ZSCAN25Q6NSZ9 544 aa11.62□□□□□ -0.55
ARFGEF1-203ENST00000518230 PRPF40BQ6NWY9 871 aaKnown RBP11.62□□□□□ -0.55
ARFGEF1-203ENST00000518230 PDRG1Q9NUG6 133 aa11.62□□□□□ -0.55
ARFGEF1-203ENST00000518230 DACT1Q9NYF0 836 aa11.62□□□□□ -0.55
ARFGEF1-203ENST00000518230 TTC21AQ8NDW8 1320 aa11.62□□□□□ -0.55
ARFGEF1-203ENST00000518230 SMTNL1A8MU46 457 aa11.62□□□□□ -0.55
ARFGEF1-203ENST00000518230 TPD52L1Q16890 204 aaPredicted RBP11.62□□□□□ -0.55
ARFGEF1-203ENST00000518230 PPP1R42Q7Z4L9 355 aa11.62□□□□□ -0.55
ARFGEF1-203ENST00000518230 CACTINQ8WUQ7 758 aaKnown RBP11.62□□□□□ -0.55
ARFGEF1-203ENST00000518230 DIP2AQ14689 1571 aa11.62□□□□□ -0.55
ARFGEF1-203ENST00000518230 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.61□□□□□ -0.55
ARFGEF1-203ENST00000518230 LARP1BQ659C4 914 aaKnown RBP11.61□□□□□ -0.55
ARFGEF1-203ENST00000518230 DDX41Q9UJV9 622 aaKnown RBP11.61□□□□□ -0.55
ARFGEF1-203ENST00000518230 MAP3K19Q56UN5 1328 aa11.61□□□□□ -0.55
ARFGEF1-203ENST00000518230 SLFN14P0C7P3 912 aa11.61□□□□□ -0.55
ARFGEF1-203ENST00000518230 UBTFL1P0CB47 393 aaPredicted RBP11.61□□□□□ -0.55
ARFGEF1-203ENST00000518230 ARID5BQ14865 1188 aa11.61□□□□□ -0.55
ARFGEF1-203ENST00000518230 CCDC144BQ3MJ40 725 aa11.61□□□□□ -0.55
ARFGEF1-203ENST00000518230 CDC37L1Q7L3B6 337 aa11.61□□□□□ -0.55
ARFGEF1-203ENST00000518230 CCDC144CPQ8IYA2 1237 aa11.61□□□□□ -0.55
ARFGEF1-203ENST00000518230 CCDC112Q8NEF3 446 aa11.61□□□□□ -0.55
ARFGEF1-203ENST00000518230 RHPN1Q8TCX5 695 aa11.61□□□□□ -0.55
ARFGEF1-203ENST00000518230 TNMDQ9H2S6 317 aa11.61□□□□□ -0.55
ARFGEF1-203ENST00000518230 PEAK1Q9H792 1746 aa11.61□□□□□ -0.55
ARFGEF1-203ENST00000518230 ZNF75DP51815 510 aa11.6□□□□□ -0.55
ARFGEF1-203ENST00000518230 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
ARFGEF1-203ENST00000518230 TCEANC2Q96MN5 208 aa11.6□□□□□ -0.55
ARFGEF1-203ENST00000518230 XRN1Q8IZH2 1706 aaKnown RBP11.6□□□□□ -0.55
ARFGEF1-203ENST00000518230 USP27XA6NNY8 438 aa11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 GTF2E1P29083 439 aaPredicted RBP11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 CNTROBQ8N137 903 aa11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 SSH3Q8TE77 659 aa11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 DNAJC25Q9H1X3 360 aa11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 NALCNQ8IZF0 1738 aa11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 RGPD8O14715 1765 aaPredicted RBP11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 CEP170BQ9Y4F5 1589 aaPredicted RBP11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 KRT85P78386 507 aa11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 PLA2G4DQ86XP0 818 aa11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 KIF18AQ8NI77 898 aa11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 PHAXQ9H814 394 aaKnown RBP11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 CLIP2Q9UDT6 1046 aa11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 TPCN1Q9ULQ1 816 aa11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 GOLGA6L4A6NEF3 574 aa11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 NPHP1O15259 732 aa11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 SRGAP3O43295 1099 aa11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 EPB41L2O43491 1005 aaKnown RBP11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 TMEM51Q9NW97 253 aa11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 CYP46A1Q9Y6A2 500 aa11.59□□□□□ -0.55
ARFGEF1-203ENST00000518230 AOX1Q06278 1338 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms