RNA–Protein interactions for RNA: ENST00000517656.5

CTNNA1-204, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-204ENST00000517656 NBPF26B4DH59 902 aa11.19□□□□□ -0.62
CTNNA1-204ENST00000517656 NPHP1O15259 732 aa11.19□□□□□ -0.62
CTNNA1-204ENST00000517656 NEFMP07197 916 aa11.19□□□□□ -0.62
CTNNA1-204ENST00000517656 NBPF10Q6P3W6 841 aaKnown RBP11.19□□□□□ -0.62
CTNNA1-204ENST00000517656 NBPF15Q8N660 670 aa11.19□□□□□ -0.62
CTNNA1-204ENST00000517656 ZNF652Q9Y2D9 606 aa11.19□□□□□ -0.62
CTNNA1-204ENST00000517656 SBF1O95248 1867 aa11.19□□□□□ -0.62
CTNNA1-204ENST00000517656 COL11A2P13942 1736 aaPredicted RBP11.18□□□□□ -0.62
CTNNA1-204ENST00000517656 TNRC6CQ9HCJ0 1690 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-204ENST00000517656 GLTPD2A6NH11 291 aa11.18□□□□□ -0.62
CTNNA1-204ENST00000517656 C21orf2O43822 256 aa11.18□□□□□ -0.62
CTNNA1-204ENST00000517656 SRGNP10124 158 aa11.18□□□□□ -0.62
CTNNA1-204ENST00000517656 STYK1Q6J9G0 422 aa11.18□□□□□ -0.62
CTNNA1-204ENST00000517656 PNISRQ8TF01 805 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-204ENST00000517656 CNKSR1Q969H4 720 aa11.18□□□□□ -0.62
CTNNA1-204ENST00000517656 PLEKHF1Q96S99 279 aa11.18□□□□□ -0.62
CTNNA1-204ENST00000517656 LTBP3Q9NS15 1303 aa11.17□□□□□ -0.62
CTNNA1-204ENST00000517656 NFE2L2Q16236 605 aa11.17□□□□□ -0.62
CTNNA1-204ENST00000517656 NBPF5PQ86XG9 351 aaPredicted RBP11.17□□□□□ -0.62
CTNNA1-204ENST00000517656 DNAJC5GQ8N7S2 189 aa11.17□□□□□ -0.62
CTNNA1-204ENST00000517656 MASTLQ96GX5 879 aa11.17□□□□□ -0.62
CTNNA1-204ENST00000517656 MIS18AQ9NYP9 233 aa11.17□□□□□ -0.62
CTNNA1-204ENST00000517656 VEGFAP15692 232 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-204ENST00000517656 SOGA3Q5TF21 947 aa11.16□□□□□ -0.62
CTNNA1-204ENST00000517656 PRPF40BQ6NWY9 871 aaKnown RBP11.16□□□□□ -0.62
CTNNA1-204ENST00000517656 TPTE2Q6XPS3 522 aa11.16□□□□□ -0.62
CTNNA1-204ENST00000517656 SMC1BQ8NDV3 1235 aa11.16□□□□□ -0.62
CTNNA1-204ENST00000517656 TAOK3Q9H2K8 898 aa11.16□□□□□ -0.62
CTNNA1-204ENST00000517656 PNNQ9H307 717 aaKnown RBP11.16□□□□□ -0.62
CTNNA1-204ENST00000517656 ZNF219Q9P2Y4 722 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-204ENST00000517656 NIP7Q9Y221 180 aaKnown RBP eCLIP11.16□□□□□ -0.62
CTNNA1-204ENST00000517656 TIAM2Q8IVF5 1701 aa11.15□□□□□ -0.62
CTNNA1-204ENST00000517656 MAPK8IP3Q9UPT6 1336 aa11.15□□□□□ -0.62
CTNNA1-204ENST00000517656 KLRG2A4D1S0 409 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-204ENST00000517656 EIF4A1P60842 406 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-204ENST00000517656 LAMB4A4D0S4 1761 aa11.14□□□□□ -0.63
CTNNA1-204ENST00000517656 KDM3BQ7LBC6 1761 aa11.14□□□□□ -0.63
CTNNA1-204ENST00000517656 NPR1P16066 1061 aa11.14□□□□□ -0.63
CTNNA1-204ENST00000517656 HOXD11P31277 338 aaPredicted RBP11.14□□□□□ -0.63
CTNNA1-204ENST00000517656 HLFQ16534 295 aa11.14□□□□□ -0.63
CTNNA1-204ENST00000517656 ERFEQ4G0M1 354 aa11.14□□□□□ -0.63
CTNNA1-204ENST00000517656 IFFO2Q5TF58 517 aa11.14□□□□□ -0.63
CTNNA1-204ENST00000517656 DPY19L2Q6NUT2 758 aa11.14□□□□□ -0.63
CTNNA1-204ENST00000517656 C7orf43Q8WVR3 580 aa11.14□□□□□ -0.63
CTNNA1-204ENST00000517656 PCNTO95613 3336 aa11.14□□□□□ -0.63
CTNNA1-204ENST00000517656 WDR90Q96KV7 1748 aa11.14□□□□□ -0.63
CTNNA1-204ENST00000517656 FER1L6Q2WGJ9 1857 aa11.13□□□□□ -0.63
CTNNA1-204ENST00000517656 POTECB2RU33 542 aa11.13□□□□□ -0.63
CTNNA1-204ENST00000517656 ERVV-1B6SEH8 477 aa11.13□□□□□ -0.63
CTNNA1-204ENST00000517656 RALBP1Q15311 655 aa11.13□□□□□ -0.63
CTNNA1-204ENST00000517656 KLRG1Q96E93 195 aa11.13□□□□□ -0.63
CTNNA1-204ENST00000517656 THUMPD2Q9BTF0 503 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-204ENST00000517656 ARFGEF2Q9Y6D5 1785 aa11.13□□□□□ -0.63
CTNNA1-204ENST00000517656 MAP3K15Q6ZN16 1313 aa11.12□□□□□ -0.63
CTNNA1-204ENST00000517656 SLX4Q8IY92 1834 aa11.12□□□□□ -0.63
CTNNA1-204ENST00000517656 FAM177BA6PVY3 158 aa11.12□□□□□ -0.63
CTNNA1-204ENST00000517656 HTRA3P83110 453 aa11.12□□□□□ -0.63
CTNNA1-204ENST00000517656 CCDC93Q567U6 631 aa11.12□□□□□ -0.63
CTNNA1-204ENST00000517656 KIF6Q6ZMV9 814 aa11.12□□□□□ -0.63
CTNNA1-204ENST00000517656 ERBB4Q15303 1308 aa11.11□□□□□ -0.63
CTNNA1-204ENST00000517656 DLG5Q8TDM6 1919 aa11.11□□□□□ -0.63
CTNNA1-204ENST00000517656 GTF2E1P29083 439 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-204ENST00000517656 TTLL7Q6ZT98 887 aa11.11□□□□□ -0.63
CTNNA1-204ENST00000517656 NGEFQ8N5V2 710 aa11.11□□□□□ -0.63
CTNNA1-204ENST00000517656 NYXQ9GZU5 481 aa11.11□□□□□ -0.63
CTNNA1-204ENST00000517656 RRP7AQ9Y3A4 280 aaKnown RBP11.11□□□□□ -0.63
CTNNA1-204ENST00000517656 IBTKQ9P2D0 1353 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-204ENST00000517656 MYL6BP14649 208 aa11.1□□□□□ -0.63
CTNNA1-204ENST00000517656 ALDH1B1P30837 517 aa11.1□□□□□ -0.63
CTNNA1-204ENST00000517656 RIPK4P57078 832 aa11.1□□□□□ -0.63
CTNNA1-204ENST00000517656 FKBP4Q02790 459 aaKnown RBP eCLIP11.1□□□□□ -0.63
CTNNA1-204ENST00000517656 CRY2Q49AN0 593 aa11.1□□□□□ -0.63
CTNNA1-204ENST00000517656 JMYQ8N9B5 988 aa11.1□□□□□ -0.63
CTNNA1-204ENST00000517656 BABAM1Q9NWV8 329 aa11.1□□□□□ -0.63
CTNNA1-204ENST00000517656 TSPYL4Q9UJ04 414 aa11.1□□□□□ -0.63
CTNNA1-204ENST00000517656 ABCC12Q96J65 1359 aa11.1□□□□□ -0.63
CTNNA1-204ENST00000517656 RIC1Q4ADV7 1423 aa11.09□□□□□ -0.63
CTNNA1-204ENST00000517656 DICER1Q9UPY3 1922 aaKnown RBP11.09□□□□□ -0.63
CTNNA1-204ENST00000517656 CCDC88AQ3V6T2 1871 aa11.09□□□□□ -0.63
CTNNA1-204ENST00000517656 DDNO94850 711 aaPredicted RBP11.09□□□□□ -0.63
CTNNA1-204ENST00000517656 LMOD3Q0VAK6 560 aa11.09□□□□□ -0.63
CTNNA1-204ENST00000517656 NUTM1Q86Y26 1132 aa11.09□□□□□ -0.63
CTNNA1-204ENST00000517656 RTKN2Q8IZC4 609 aa11.09□□□□□ -0.63
CTNNA1-204ENST00000517656 ZBTB3Q9H5J0 574 aa11.09□□□□□ -0.63
CTNNA1-204ENST00000517656 UBN2Q6ZU65 1347 aa11.09□□□□□ -0.63
CTNNA1-204ENST00000517656 TMPOP42166 694 aaKnown RBP11.08□□□□□ -0.64
CTNNA1-204ENST00000517656 OLFM4Q6UX06 510 aa11.08□□□□□ -0.64
CTNNA1-204ENST00000517656 LRP10Q7Z4F1 713 aa11.08□□□□□ -0.64
CTNNA1-204ENST00000517656 ZNF34Q8IZ26 560 aa11.08□□□□□ -0.64
CTNNA1-204ENST00000517656 L3MBTL3Q96JM7 780 aaPredicted RBP11.08□□□□□ -0.64
CTNNA1-204ENST00000517656 CACNA1SQ13698 1873 aa11.08□□□□□ -0.64
CTNNA1-204ENST00000517656 SNED1Q8TER0 1413 aa11.08□□□□□ -0.64
CTNNA1-204ENST00000517656 MYBBP1AQ9BQG0 1328 aaKnown RBP11.08□□□□□ -0.64
CTNNA1-204ENST00000517656 IQCA1LA6NCM1 817 aa11.07□□□□□ -0.64
CTNNA1-204ENST00000517656 GPTP24298 496 aa11.07□□□□□ -0.64
CTNNA1-204ENST00000517656 HOXA10P31260 410 aaPredicted RBP11.07□□□□□ -0.64
CTNNA1-204ENST00000517656 PDIA6Q15084 440 aa11.07□□□□□ -0.64
CTNNA1-204ENST00000517656 SUSD4Q5VX71 490 aa11.07□□□□□ -0.64
CTNNA1-204ENST00000517656 CHADLQ6NUI6 762 aa11.07□□□□□ -0.64
CTNNA1-204ENST00000517656 GIGYF2Q6Y7W6 1299 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms