RNA–Protein interactions for RNA: ENST00000517624.1

VIRMA-203, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 497 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-203ENST00000517624 IRX5P78411 483 aaPredicted RBP11.83□□□□□ -0.52
VIRMA-203ENST00000517624 SMC5Q8IY18 1101 aa11.83□□□□□ -0.52
VIRMA-203ENST00000517624 TMEM57Q8N5G2 664 aa11.83□□□□□ -0.52
VIRMA-203ENST00000517624 PIGBQ92521 554 aa11.83□□□□□ -0.52
VIRMA-203ENST00000517624 MARVELD3Q96A59 401 aa11.83□□□□□ -0.52
VIRMA-203ENST00000517624 ACSBG1Q96GR2 724 aa11.83□□□□□ -0.52
VIRMA-203ENST00000517624 UPF2Q9HAU5 1272 aaKnown RBP11.83□□□□□ -0.52
VIRMA-203ENST00000517624 ZBTB40Q9NUA8 1239 aa11.83□□□□□ -0.52
VIRMA-203ENST00000517624 TMOD3Q9NYL9 352 aa11.83□□□□□ -0.52
VIRMA-203ENST00000517624 TSPYL4Q9UJ04 414 aa11.83□□□□□ -0.52
VIRMA-203ENST00000517624 LAS1LQ9Y4W2 734 aaKnown RBP11.83□□□□□ -0.52
VIRMA-203ENST00000517624 DOT1LQ8TEK3 1739 aa11.83□□□□□ -0.52
VIRMA-203ENST00000517624 KCNQ2O43526 872 aa11.82□□□□□ -0.52
VIRMA-203ENST00000517624 VAMP4O75379 141 aa11.82□□□□□ -0.52
VIRMA-203ENST00000517624 MRPL50Q8N5N7 158 aaKnown RBP11.82□□□□□ -0.52
VIRMA-203ENST00000517624 ABCC4O15439 1325 aa11.82□□□□□ -0.52
VIRMA-203ENST00000517624 SBF2Q86WG5 1849 aa11.81□□□□□ -0.52
VIRMA-203ENST00000517624 KCNQ3O43525 872 aa11.81□□□□□ -0.52
VIRMA-203ENST00000517624 SLC39A6Q13433 755 aa11.81□□□□□ -0.52
VIRMA-203ENST00000517624 NBR1Q14596 966 aa11.81□□□□□ -0.52
VIRMA-203ENST00000517624 ZNF790Q6PG37 636 aa11.81□□□□□ -0.52
VIRMA-203ENST00000517624 SYTL4Q96C24 671 aaPredicted RBP11.81□□□□□ -0.52
VIRMA-203ENST00000517624 API5Q9BZZ5 524 aaKnown RBP11.81□□□□□ -0.52
VIRMA-203ENST00000517624 ATG3Q9NT62 314 aa11.81□□□□□ -0.52
VIRMA-203ENST00000517624 KDM3BQ7LBC6 1761 aa11.81□□□□□ -0.52
VIRMA-203ENST00000517624 NUBP1P53384 320 aa11.8□□□□□ -0.52
VIRMA-203ENST00000517624 EIF4A1P60842 406 aaKnown RBP11.8□□□□□ -0.52
VIRMA-203ENST00000517624 TWISTNBQ3B726 338 aaPredicted RBP11.8□□□□□ -0.52
VIRMA-203ENST00000517624 PTF1AQ7RTS3 328 aa11.8□□□□□ -0.52
VIRMA-203ENST00000517624 BCL11BQ9C0K0 894 aaPredicted RBP11.8□□□□□ -0.52
VIRMA-203ENST00000517624 ASAP1Q9ULH1 1129 aa11.8□□□□□ -0.52
VIRMA-203ENST00000517624 NHSQ6T4R5 1651 aa11.8□□□□□ -0.52
VIRMA-203ENST00000517624 HEG1Q9ULI3 1381 aa11.79□□□□□ -0.52
VIRMA-203ENST00000517624 BECN1Q14457 450 aa11.79□□□□□ -0.52
VIRMA-203ENST00000517624 PAPPAQ13219 1627 aa11.78□□□□□ -0.52
VIRMA-203ENST00000517624 TTC5Q8N0Z6 440 aa11.78□□□□□ -0.52
VIRMA-203ENST00000517624 C8orf58Q8NAV2 365 aa11.78□□□□□ -0.52
VIRMA-203ENST00000517624 GCC1Q96CN9 775 aa11.78□□□□□ -0.52
VIRMA-203ENST00000517624 ZNF496Q96IT1 587 aaPredicted RBP11.78□□□□□ -0.52
VIRMA-203ENST00000517624 KCPQ6ZWJ8 1503 aa11.77□□□□□ -0.52
VIRMA-203ENST00000517624 TRIM37O94972 964 aa11.77□□□□□ -0.53
VIRMA-203ENST00000517624 KRT24Q2M2I5 525 aa11.77□□□□□ -0.53
VIRMA-203ENST00000517624 TSPYL6Q8N831 410 aa11.77□□□□□ -0.53
VIRMA-203ENST00000517624 SMARCC1Q92922 1105 aaPredicted RBP11.77□□□□□ -0.53
VIRMA-203ENST00000517624 TBC1D32Q96NH3 1257 aa11.77□□□□□ -0.53
VIRMA-203ENST00000517624 FMNL2Q96PY5 1086 aa11.77□□□□□ -0.53
VIRMA-203ENST00000517624 TMEM121BQ9BXQ6 578 aaPredicted RBP11.77□□□□□ -0.53
VIRMA-203ENST00000517624 UBR2Q8IWV8 1755 aa11.77□□□□□ -0.53
VIRMA-203ENST00000517624 GIGYF1O75420 1035 aaPredicted RBP11.76□□□□□ -0.53
VIRMA-203ENST00000517624 NUCB1Q02818 461 aa11.76□□□□□ -0.53
VIRMA-203ENST00000517624 SOS1Q07889 1333 aaPredicted RBP11.76□□□□□ -0.53
VIRMA-203ENST00000517624 BTAF1O14981 1849 aa11.76□□□□□ -0.53
VIRMA-203ENST00000517624 ZBTB7BO15156 539 aaPredicted RBP11.75□□□□□ -0.53
VIRMA-203ENST00000517624 PTCD1O75127 700 aaKnown RBP11.75□□□□□ -0.53
VIRMA-203ENST00000517624 HOXB7P09629 217 aa11.75□□□□□ -0.53
VIRMA-203ENST00000517624 DEKP35659 375 aaKnown RBP11.75□□□□□ -0.53
VIRMA-203ENST00000517624 VSIG10Q8N0Z9 540 aa11.75□□□□□ -0.53
VIRMA-203ENST00000517624 SLC4A9Q96Q91 983 aa11.75□□□□□ -0.53
VIRMA-203ENST00000517624 PTPRCP08575 1304 aa11.75□□□□□ -0.53
VIRMA-203ENST00000517624 ELL2O00472 640 aaPredicted RBP11.74□□□□□ -0.53
VIRMA-203ENST00000517624 EIF5BO60841 1220 aaKnown RBP11.74□□□□□ -0.53
VIRMA-203ENST00000517624 SNRPA1P09661 255 aaKnown RBP11.74□□□□□ -0.53
VIRMA-203ENST00000517624 PLCD3Q8N3E9 789 aa11.74□□□□□ -0.53
VIRMA-203ENST00000517624 PALLDQ8WX93 1383 aa11.74□□□□□ -0.53
VIRMA-203ENST00000517624 LOC102724428A0A0B4J2F2 783 aa11.73□□□□□ -0.53
VIRMA-203ENST00000517624 PRAMEF22A3QJZ6 481 aa11.73□□□□□ -0.53
VIRMA-203ENST00000517624 SIK1P57059 783 aa11.73□□□□□ -0.53
VIRMA-203ENST00000517624 CHD1LQ86WJ1 897 aa11.73□□□□□ -0.53
VIRMA-203ENST00000517624 PLSCR1O15162 318 aa11.72□□□□□ -0.53
VIRMA-203ENST00000517624 INTS3Q68E01 1043 aaKnown RBP11.72□□□□□ -0.53
VIRMA-203ENST00000517624 TEX13AQ9BXU3 409 aaPredicted RBP11.72□□□□□ -0.53
VIRMA-203ENST00000517624 LY75O60449 1722 aa11.72□□□□□ -0.53
VIRMA-203ENST00000517624 ZNF831Q5JPB2 1677 aa11.71□□□□□ -0.53
VIRMA-203ENST00000517624 APBA3O96018 575 aa11.71□□□□□ -0.53
VIRMA-203ENST00000517624 BMP2KLQ5H9B9 411 aa11.71□□□□□ -0.53
VIRMA-203ENST00000517624 DNAJC10Q8IXB1 793 aa11.71□□□□□ -0.53
VIRMA-203ENST00000517624 CHMP4AQ9BY43 222 aa11.71□□□□□ -0.53
VIRMA-203ENST00000517624 OCEL1Q9H607 264 aa11.71□□□□□ -0.53
VIRMA-203ENST00000517624 USP16Q9Y5T5 823 aa11.71□□□□□ -0.53
VIRMA-203ENST00000517624 TNS1Q9HBL0 1735 aaKnown RBP11.71□□□□□ -0.54
VIRMA-203ENST00000517624 CICQ96RK0 1608 aaPredicted RBP11.71□□□□□ -0.54
VIRMA-203ENST00000517624 N4BP2Q86UW6 1770 aaPredicted RBP11.7□□□□□ -0.54
VIRMA-203ENST00000517624 ATP6V1AP38606 617 aa11.7□□□□□ -0.54
VIRMA-203ENST00000517624 ITPK1Q13572 414 aa11.7□□□□□ -0.54
VIRMA-203ENST00000517624 HDGFL1Q5TGJ6 251 aa11.7□□□□□ -0.54
VIRMA-203ENST00000517624 CCDC30Q5VVM6 783 aa11.7□□□□□ -0.54
VIRMA-203ENST00000517624 C5P01031 1676 aa11.7□□□□□ -0.54
VIRMA-203ENST00000517624 STARD3NLO95772 234 aa11.69□□□□□ -0.54
VIRMA-203ENST00000517624 CYP19A1P11511 503 aaPredicted RBP11.69□□□□□ -0.54
VIRMA-203ENST00000517624 EIF2S2P20042 333 aaKnown RBP11.69□□□□□ -0.54
VIRMA-203ENST00000517624 NFKBIBQ15653 356 aa11.69□□□□□ -0.54
VIRMA-203ENST00000517624 CCDC125Q86Z20 511 aa11.69□□□□□ -0.54
VIRMA-203ENST00000517624 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.69□□□□□ -0.54
VIRMA-203ENST00000517624 TJP1Q07157 1748 aa11.69□□□□□ -0.54
VIRMA-203ENST00000517624 ATP10DQ9P241 1426 aa11.69□□□□□ -0.54
VIRMA-203ENST00000517624 ERBB4Q15303 1308 aa11.68□□□□□ -0.54
VIRMA-203ENST00000517624 POTEB3A0JP26 581 aa11.68□□□□□ -0.54
VIRMA-203ENST00000517624 SNPHO15079 494 aa11.68□□□□□ -0.54
VIRMA-203ENST00000517624 SLC4A3P48751 1232 aa11.68□□□□□ -0.54
VIRMA-203ENST00000517624 PDIA6Q15084 440 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms