RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 NARFQ9UHQ1 456 aa12.68□□□□□ -0.38
CLN8-202ENST00000517514 RCAN3Q9UKA8 241 aa12.68□□□□□ -0.38
CLN8-202ENST00000517514 ZNF330Q9Y3S2 320 aaPredicted RBP12.68□□□□□ -0.38
CLN8-202ENST00000517514 MAP3K15Q6ZN16 1313 aa12.67□□□□□ -0.38
CLN8-202ENST00000517514 PSDA5PKW4 1024 aaPredicted RBP12.67□□□□□ -0.38
CLN8-202ENST00000517514 HMGB2P26583 209 aaKnown RBP12.67□□□□□ -0.38
CLN8-202ENST00000517514 AFDNP55196 1824 aaKnown RBP12.67□□□□□ -0.38
CLN8-202ENST00000517514 GYS1P13807 737 aa12.66□□□□□ -0.38
CLN8-202ENST00000517514 USPL1Q5W0Q7 1092 aa12.66□□□□□ -0.38
CLN8-202ENST00000517514 CHMP4AQ9BY43 222 aa12.66□□□□□ -0.38
CLN8-202ENST00000517514 ZBTB3Q9H5J0 574 aa12.66□□□□□ -0.38
CLN8-202ENST00000517514 NOB1Q9ULX3 412 aaKnown RBP12.66□□□□□ -0.38
CLN8-202ENST00000517514 A0A087WZG4 1122 aa12.65□□□□□ -0.38
CLN8-202ENST00000517514 ERVV-1B6SEH8 477 aa12.65□□□□□ -0.38
CLN8-202ENST00000517514 F6X3S4 739 aa12.65□□□□□ -0.38
CLN8-202ENST00000517514 RFC4P35249 363 aa12.65□□□□□ -0.38
CLN8-202ENST00000517514 FKBP8Q14318 412 aa12.65□□□□□ -0.38
CLN8-202ENST00000517514 ANKRD13DQ6ZTN6 518 aa12.65□□□□□ -0.38
CLN8-202ENST00000517514 FLAD1Q8NFF5 587 aa12.65□□□□□ -0.38
CLN8-202ENST00000517514 PLBD2Q8NHP8 589 aa12.65□□□□□ -0.38
CLN8-202ENST00000517514 NRXN2Q9P2S2 1712 aa12.65□□□□□ -0.38
CLN8-202ENST00000517514 PI4KAP2A4QPH2 592 aa12.64□□□□□ -0.39
CLN8-202ENST00000517514 KSR2Q6VAB6 950 aa12.64□□□□□ -0.39
CLN8-202ENST00000517514 GIGYF2Q6Y7W6 1299 aaKnown RBP12.64□□□□□ -0.39
CLN8-202ENST00000517514 PI4KAP1Q8N8J0 262 aa12.64□□□□□ -0.39
CLN8-202ENST00000517514 MAP3K2Q9Y2U5 619 aa12.64□□□□□ -0.39
CLN8-202ENST00000517514 PTPRCP08575 1304 aa12.63□□□□□ -0.39
CLN8-202ENST00000517514 RNF123Q5XPI4 1314 aa12.63□□□□□ -0.39
CLN8-202ENST00000517514 PLIN1O60240 522 aa12.63□□□□□ -0.39
CLN8-202ENST00000517514 IGKV5-2P06315 115 aa12.63□□□□□ -0.39
CLN8-202ENST00000517514 TRIM27P14373 513 aa12.63□□□□□ -0.39
CLN8-202ENST00000517514 TM4SF1P30408 202 aa12.63□□□□□ -0.39
CLN8-202ENST00000517514 FKBP5Q13451 457 aaPredicted RBP12.63□□□□□ -0.39
CLN8-202ENST00000517514 TBC1D9BQ66K14 1250 aa12.63□□□□□ -0.39
CLN8-202ENST00000517514 ZNF34Q8IZ26 560 aa12.63□□□□□ -0.39
CLN8-202ENST00000517514 ISCA1Q9BUE6 129 aa12.63□□□□□ -0.39
CLN8-202ENST00000517514 UBN2Q6ZU65 1347 aa12.62□□□□□ -0.39
CLN8-202ENST00000517514 ATP10DQ9P241 1426 aa12.62□□□□□ -0.39
CLN8-202ENST00000517514 RGL2O15211 777 aa12.62□□□□□ -0.39
CLN8-202ENST00000517514 ZPR1O75312 459 aa12.62□□□□□ -0.39
CLN8-202ENST00000517514 RLBP1P12271 317 aa12.62□□□□□ -0.39
CLN8-202ENST00000517514 DDR1Q08345 913 aa12.62□□□□□ -0.39
CLN8-202ENST00000517514 TCIRG1Q13488 830 aa12.62□□□□□ -0.39
CLN8-202ENST00000517514 MSL1Q68DK7 614 aa12.62□□□□□ -0.39
CLN8-202ENST00000517514 KIF6Q6ZMV9 814 aa12.62□□□□□ -0.39
CLN8-202ENST00000517514 ARHGAP45Q92619 1136 aa12.62□□□□□ -0.39
CLN8-202ENST00000517514 ARXQ96QS3 562 aa12.62□□□□□ -0.39
CLN8-202ENST00000517514 METTL22Q9BUU2 404 aaPredicted RBP12.62□□□□□ -0.39
CLN8-202ENST00000517514 ABCC4O15439 1325 aa12.62□□□□□ -0.39
CLN8-202ENST00000517514 KIF16BQ96L93 1317 aa12.62□□□□□ -0.39
CLN8-202ENST00000517514 PXDNLA1KZ92 1463 aa12.61□□□□□ -0.39
CLN8-202ENST00000517514 MSH5O43196 834 aa12.61□□□□□ -0.39
CLN8-202ENST00000517514 NFIXQ14938 502 aa12.61□□□□□ -0.39
CLN8-202ENST00000517514 BEND3Q5T5X7 828 aa12.61□□□□□ -0.39
CLN8-202ENST00000517514 C20orf194Q5TEA3 1177 aa12.61□□□□□ -0.39
CLN8-202ENST00000517514 CLEC4GQ6UXB4 293 aa12.61□□□□□ -0.39
CLN8-202ENST00000517514 ATF7IPQ6VMQ6 1270 aa12.61□□□□□ -0.39
CLN8-202ENST00000517514 RIC3Q7Z5B4 369 aa12.61□□□□□ -0.39
CLN8-202ENST00000517514 DNAAF4Q8WXU2 420 aa12.61□□□□□ -0.39
CLN8-202ENST00000517514 FRAT1Q92837 279 aaPredicted RBP12.61□□□□□ -0.39
CLN8-202ENST00000517514 SGIP1Q9BQI5 828 aa12.61□□□□□ -0.39
CLN8-202ENST00000517514 ANKRD31Q8N7Z5 1873 aa12.61□□□□□ -0.39
CLN8-202ENST00000517514 DDX60Q8IY21 1712 aaKnown RBP12.6□□□□□ -0.39
CLN8-202ENST00000517514 ATP5J2-PTCD1G3V325 749 aa12.6□□□□□ -0.39
CLN8-202ENST00000517514 ZBTB7AO95365 584 aa12.6□□□□□ -0.39
CLN8-202ENST00000517514 DDX58O95786 925 aaKnown RBP12.6□□□□□ -0.39
CLN8-202ENST00000517514 SLC16A10Q8TF71 515 aa12.6□□□□□ -0.39
CLN8-202ENST00000517514 MYD88Q99836 296 aa12.6□□□□□ -0.39
CLN8-202ENST00000517514 LAMB2P55268 1798 aa12.59□□□□□ -0.39
CLN8-202ENST00000517514 GPTP24298 496 aa12.59□□□□□ -0.39
CLN8-202ENST00000517514 RRP1P56182 461 aaKnown RBP12.59□□□□□ -0.39
CLN8-202ENST00000517514 TRIM28Q13263 835 aaKnown RBP12.59□□□□□ -0.39
CLN8-202ENST00000517514 CWF19L2Q2TBE0 894 aaKnown RBP12.59□□□□□ -0.39
CLN8-202ENST00000517514 ZKSCAN2Q63HK3 967 aa12.59□□□□□ -0.39
CLN8-202ENST00000517514 NLRP10Q86W26 655 aa12.59□□□□□ -0.39
CLN8-202ENST00000517514 TNRC6CQ9HCJ0 1690 aaKnown RBP12.58□□□□□ -0.4
CLN8-202ENST00000517514 KIF13BQ9NQT8 1826 aa12.58□□□□□ -0.4
CLN8-202ENST00000517514 NEURL1BA8MQ27 555 aa12.58□□□□□ -0.4
CLN8-202ENST00000517514 POLRMTO00411 1230 aaKnown RBP12.58□□□□□ -0.4
CLN8-202ENST00000517514 PTGER2P43116 358 aa12.58□□□□□ -0.4
CLN8-202ENST00000517514 SUSD4Q5VX71 490 aa12.58□□□□□ -0.4
CLN8-202ENST00000517514 BICDL1Q6ZP65 573 aa12.58□□□□□ -0.4
CLN8-202ENST00000517514 NPM2Q86SE8 214 aaKnown RBP12.58□□□□□ -0.4
CLN8-202ENST00000517514 SYNE4Q8N205 404 aa12.58□□□□□ -0.4
CLN8-202ENST00000517514 NLGN1Q8N2Q7 840 aa12.58□□□□□ -0.4
CLN8-202ENST00000517514 PANK1Q8TE04 598 aa12.58□□□□□ -0.4
CLN8-202ENST00000517514 CLUAP1Q96AJ1 413 aa12.58□□□□□ -0.4
CLN8-202ENST00000517514 API5Q9BZZ5 524 aaKnown RBP12.58□□□□□ -0.4
CLN8-202ENST00000517514 MTFR1LQ9H019 292 aa12.58□□□□□ -0.4
CLN8-202ENST00000517514 KIAA1551Q9HCM1 1747 aa12.58□□□□□ -0.4
CLN8-202ENST00000517514 ATF5Q9Y2D1 282 aaPredicted RBP12.58□□□□□ -0.4
CLN8-202ENST00000517514 SUPT16HQ9Y5B9 1047 aaKnown RBP12.58□□□□□ -0.4
CLN8-202ENST00000517514 NTSR2O95665 410 aa12.57□□□□□ -0.4
CLN8-202ENST00000517514 MMP10P09238 476 aa12.57□□□□□ -0.4
CLN8-202ENST00000517514 CASP7P55210 303 aa12.57□□□□□ -0.4
CLN8-202ENST00000517514 INTS3Q68E01 1043 aaKnown RBP12.57□□□□□ -0.4
CLN8-202ENST00000517514 SLC4A10Q6U841 1118 aa12.57□□□□□ -0.4
CLN8-202ENST00000517514 TMEM57Q8N5G2 664 aa12.57□□□□□ -0.4
CLN8-202ENST00000517514 LINS1Q8NG48 757 aa12.57□□□□□ -0.4
CLN8-202ENST00000517514 NIP7Q9Y221 180 aaKnown RBP eCLIP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms