RNA–Protein interactions for RNA: ENST00000517386.1

HMBOX1-204, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-204ENST00000517386 COL15A1P39059 1388 aa10.62□□□□□ -0.71
HMBOX1-204ENST00000517386 SCN11AQ9UI33 1791 aa10.62□□□□□ -0.71
HMBOX1-204ENST00000517386 SERPINB2P05120 415 aa10.61□□□□□ -0.71
HMBOX1-204ENST00000517386 PRELPP51888 382 aa10.61□□□□□ -0.71
HMBOX1-204ENST00000517386 C2CD5Q86YS7 1000 aa10.61□□□□□ -0.71
HMBOX1-204ENST00000517386 DNAJC5GQ8N7S2 189 aa10.61□□□□□ -0.71
HMBOX1-204ENST00000517386 KIF12Q96FN5 646 aa10.61□□□□□ -0.71
HMBOX1-204ENST00000517386 NARFQ9UHQ1 456 aa10.61□□□□□ -0.71
HMBOX1-204ENST00000517386 BRCA1P38398 1863 aaKnown RBP10.61□□□□□ -0.71
HMBOX1-204ENST00000517386 CARMIL3Q8ND23 1372 aa10.61□□□□□ -0.71
HMBOX1-204ENST00000517386 PIP4K2AP48426 406 aaPredicted RBP10.6□□□□□ -0.71
HMBOX1-204ENST00000517386 TBC1D2BQ9UPU7 963 aa10.6□□□□□ -0.71
HMBOX1-204ENST00000517386 ADAMTS7Q9UKP4 1686 aa10.6□□□□□ -0.71
HMBOX1-204ENST00000517386 KDM2BQ8NHM5 1336 aa10.59□□□□□ -0.71
HMBOX1-204ENST00000517386 TTC5Q8N0Z6 440 aa10.59□□□□□ -0.71
HMBOX1-204ENST00000517386 IL17REQ8NFR9 667 aa10.59□□□□□ -0.71
HMBOX1-204ENST00000517386 RBM46Q8TBY0 533 aaKnown RBP10.59□□□□□ -0.71
HMBOX1-204ENST00000517386 ZNF622Q969S3 477 aaKnown RBP eCLIP10.59□□□□□ -0.711e-7■■■□□ 15.6
HMBOX1-204ENST00000517386 ZNF496Q96IT1 587 aaPredicted RBP10.59□□□□□ -0.71
HMBOX1-204ENST00000517386 PER1O15534 1290 aaPredicted RBP10.58□□□□□ -0.72
HMBOX1-204ENST00000517386 KCNQ3O43525 872 aa10.58□□□□□ -0.72
HMBOX1-204ENST00000517386 TEFQ10587 303 aa10.58□□□□□ -0.72
HMBOX1-204ENST00000517386 TBC1D9BQ66K14 1250 aa10.58□□□□□ -0.72
HMBOX1-204ENST00000517386 ARFGEF1Q9Y6D6 1849 aa10.58□□□□□ -0.72
HMBOX1-204ENST00000517386 MRC1P22897 1456 aa10.57□□□□□ -0.72
HMBOX1-204ENST00000517386 AFDNP55196 1824 aaKnown RBP10.57□□□□□ -0.72
HMBOX1-204ENST00000517386 H0YIN7 160 aa10.57□□□□□ -0.72
HMBOX1-204ENST00000517386 STARD3NLO95772 234 aa10.57□□□□□ -0.72
HMBOX1-204ENST00000517386 A1BGP04217 495 aa10.57□□□□□ -0.72
HMBOX1-204ENST00000517386 TTLL6Q8N841 843 aa10.57□□□□□ -0.72
HMBOX1-204ENST00000517386 PRAMEF22A3QJZ6 481 aa10.56□□□□□ -0.72
HMBOX1-204ENST00000517386 GNAT3A8MTJ3 354 aa10.56□□□□□ -0.72
HMBOX1-204ENST00000517386 NFKBIEO00221 500 aa10.56□□□□□ -0.72
HMBOX1-204ENST00000517386 C21orf2O43822 256 aa10.56□□□□□ -0.72
HMBOX1-204ENST00000517386 LMNB1P20700 586 aa10.56□□□□□ -0.72
HMBOX1-204ENST00000517386 EIF5P55010 431 aaKnown RBP10.56□□□□□ -0.72
HMBOX1-204ENST00000517386 PHACTR3Q96KR7 559 aa10.56□□□□□ -0.72
HMBOX1-204ENST00000517386 TMEM121BQ9BXQ6 578 aaPredicted RBP10.56□□□□□ -0.72
HMBOX1-204ENST00000517386 SPDYE4A6NLX3 237 aa10.55□□□□□ -0.72
HMBOX1-204ENST00000517386 NPHP1O15259 732 aa10.55□□□□□ -0.72
HMBOX1-204ENST00000517386 TIE1P35590 1138 aa10.55□□□□□ -0.72
HMBOX1-204ENST00000517386 PRR5LQ6MZQ0 368 aa10.55□□□□□ -0.72
HMBOX1-204ENST00000517386 ZNF790Q6PG37 636 aa10.55□□□□□ -0.72
HMBOX1-204ENST00000517386 VSIG10Q8N0Z9 540 aa10.55□□□□□ -0.72
HMBOX1-204ENST00000517386 KLRG1Q96E93 195 aa10.55□□□□□ -0.72
HMBOX1-204ENST00000517386 VIRMAQ69YN4 1812 aaKnown RBP10.55□□□□□ -0.72
HMBOX1-204ENST00000517386 SBF1O95248 1867 aa10.55□□□□□ -0.72
HMBOX1-204ENST00000517386 HEG1Q9ULI3 1381 aa10.54□□□□□ -0.72
HMBOX1-204ENST00000517386 FAM177BA6PVY3 158 aa10.54□□□□□ -0.72
HMBOX1-204ENST00000517386 PRKAR2BP31323 418 aa10.54□□□□□ -0.72
HMBOX1-204ENST00000517386 FSTL1Q12841 308 aa10.54□□□□□ -0.72
HMBOX1-204ENST00000517386 COL13A1Q5TAT6 717 aaPredicted RBP10.54□□□□□ -0.72
HMBOX1-204ENST00000517386 SMC1BQ8NDV3 1235 aa10.54□□□□□ -0.72
HMBOX1-204ENST00000517386 WDR90Q96KV7 1748 aa10.54□□□□□ -0.72
HMBOX1-204ENST00000517386 COL3A1P02461 1466 aaPredicted RBP10.54□□□□□ -0.72
HMBOX1-204ENST00000517386 A0A087WZG4 1122 aa10.53□□□□□ -0.72
HMBOX1-204ENST00000517386 GLTPD2A6NH11 291 aa10.53□□□□□ -0.72
HMBOX1-204ENST00000517386 TTLL13PA6NNM8 815 aa10.53□□□□□ -0.72
HMBOX1-204ENST00000517386 BTBD11A6QL63 1104 aa10.53□□□□□ -0.72
HMBOX1-204ENST00000517386 DCTN1Q14203 1278 aa10.53□□□□□ -0.72
HMBOX1-204ENST00000517386 MCM10Q7L590 875 aa10.53□□□□□ -0.72
HMBOX1-204ENST00000517386 NPM2Q86SE8 214 aaKnown RBP10.53□□□□□ -0.72
HMBOX1-204ENST00000517386 GAS2L2Q8NHY3 880 aa10.53□□□□□ -0.72
HMBOX1-204ENST00000517386 CAMTA2O94983 1202 aa10.52□□□□□ -0.73
HMBOX1-204ENST00000517386 VEGFAP15692 232 aaPredicted RBP10.52□□□□□ -0.73
HMBOX1-204ENST00000517386 ERFEQ4G0M1 354 aa10.52□□□□□ -0.73
HMBOX1-204ENST00000517386 DZIP3Q86Y13 1208 aaKnown RBP10.52□□□□□ -0.73
HMBOX1-204ENST00000517386 CNBD1Q8NA66 436 aa10.52□□□□□ -0.73
HMBOX1-204ENST00000517386 FMNL2Q96PY5 1086 aa10.52□□□□□ -0.73
HMBOX1-204ENST00000517386 SETDB2Q96T68 719 aa10.52□□□□□ -0.73
HMBOX1-204ENST00000517386 BRIP1Q9BX63 1249 aa10.52□□□□□ -0.73
HMBOX1-204ENST00000517386 USP16Q9Y5T5 823 aa10.52□□□□□ -0.73
HMBOX1-204ENST00000517386 UBR2Q8IWV8 1755 aa10.52□□□□□ -0.73
HMBOX1-204ENST00000517386 NRXN2Q9P2S2 1712 aa10.51□□□□□ -0.73
HMBOX1-204ENST00000517386 POTECB2RU33 542 aa10.51□□□□□ -0.73
HMBOX1-204ENST00000517386 MAP3K13O43283 966 aa10.51□□□□□ -0.73
HMBOX1-204ENST00000517386 U2AF1L5P0DN76 240 aaPredicted RBP10.51□□□□□ -0.73
HMBOX1-204ENST00000517386 PDE6BP35913 854 aa10.51□□□□□ -0.73
HMBOX1-204ENST00000517386 U2AF1Q01081 240 aaKnown RBP eCLIP10.51□□□□□ -0.73
HMBOX1-204ENST00000517386 OLFM4Q6UX06 510 aa10.51□□□□□ -0.73
HMBOX1-204ENST00000517386 RSPH6AQ9H0K4 717 aa10.51□□□□□ -0.73
HMBOX1-204ENST00000517386 MIS18AQ9NYP9 233 aa10.51□□□□□ -0.73
HMBOX1-204ENST00000517386 CCDC88AQ3V6T2 1871 aa10.51□□□□□ -0.73
HMBOX1-204ENST00000517386 ANKRD31Q8N7Z5 1873 aa10.51□□□□□ -0.73
HMBOX1-204ENST00000517386 DDNO94850 711 aaPredicted RBP10.5□□□□□ -0.73
HMBOX1-204ENST00000517386 IL6STP40189 918 aaPredicted RBP10.5□□□□□ -0.73
HMBOX1-204ENST00000517386 PRPF40BQ6NWY9 871 aaKnown RBP10.5□□□□□ -0.73
HMBOX1-204ENST00000517386 NGEFQ8N5V2 710 aa10.5□□□□□ -0.73
HMBOX1-204ENST00000517386 TEX13AQ9BXU3 409 aaPredicted RBP10.5□□□□□ -0.73
HMBOX1-204ENST00000517386 TNRC6CQ9HCJ0 1690 aaKnown RBP10.5□□□□□ -0.73
HMBOX1-204ENST00000517386 COL11A2P13942 1736 aaPredicted RBP10.5□□□□□ -0.73
HMBOX1-204ENST00000517386 ST5P78524 1137 aa10.49□□□□□ -0.73
HMBOX1-204ENST00000517386 DPY19L2Q6NUT2 758 aa10.49□□□□□ -0.73
HMBOX1-204ENST00000517386 NBPF5PQ86XG9 351 aaPredicted RBP10.49□□□□□ -0.73
HMBOX1-204ENST00000517386 JMYQ8N9B5 988 aa10.49□□□□□ -0.73
HMBOX1-204ENST00000517386 CFAP53Q96M91 514 aa10.49□□□□□ -0.73
HMBOX1-204ENST00000517386 KRTAP3-3Q9BYR6 98 aa10.49□□□□□ -0.73
HMBOX1-204ENST00000517386 KRTAP3-2Q9BYR7 98 aa10.49□□□□□ -0.73
HMBOX1-204ENST00000517386 TAOK3Q9H2K8 898 aa10.49□□□□□ -0.73
HMBOX1-204ENST00000517386 TIAM2Q8IVF5 1701 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms