RNA–Protein interactions for RNA: ENST00000516173.1

RN7SKP43-201, Transcript of RNA, 7SK small nuclear pseudogene 43, humanhuman

BASIC

Gene RN7SKP43, Length 320 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP43-201ENST00000516173 PIK3R2O00459 728 aa3.98□□□□□ -1.77
RN7SKP43-201ENST00000516173 NBPF1Q3BBV0 1214 aa3.98□□□□□ -1.77
RN7SKP43-201ENST00000516173 RGL3Q3MIN7 710 aa3.98□□□□□ -1.77
RN7SKP43-201ENST00000516173 TRMT2AQ8IZ69 625 aaKnown RBP3.98□□□□□ -1.77
RN7SKP43-201ENST00000516173 FOXJ1Q92949 421 aa3.98□□□□□ -1.77
RN7SKP43-201ENST00000516173 ZNF837Q96EG3 531 aaPredicted RBP3.98□□□□□ -1.77
RN7SKP43-201ENST00000516173 GMCL1Q96IK5 515 aa3.98□□□□□ -1.77
RN7SKP43-201ENST00000516173 POLR3GLQ9BT43 218 aa3.98□□□□□ -1.77
RN7SKP43-201ENST00000516173 ZFYVE16Q7Z3T8 1539 aa3.98□□□□□ -1.77
RN7SKP43-201ENST00000516173 PPLO60437 1756 aa3.98□□□□□ -1.77
RN7SKP43-201ENST00000516173 NINLQ9Y2I6 1382 aa3.98□□□□□ -1.77
RN7SKP43-201ENST00000516173 CLTCL1P53675 1640 aa3.97□□□□□ -1.77
RN7SKP43-201ENST00000516173 USP32Q8NFA0 1604 aa3.97□□□□□ -1.77
RN7SKP43-201ENST00000516173 CTSOP43234 321 aaPredicted RBP3.97□□□□□ -1.77
RN7SKP43-201ENST00000516173 GATA4P43694 442 aa3.97□□□□□ -1.77
RN7SKP43-201ENST00000516173 WDR43Q15061 677 aaKnown RBP eCLIP3.97□□□□□ -1.77
RN7SKP43-201ENST00000516173 NKAPLQ5M9Q1 402 aa3.97□□□□□ -1.77
RN7SKP43-201ENST00000516173 RNF217Q8TC41 542 aa3.97□□□□□ -1.77
RN7SKP43-201ENST00000516173 DDRGK1Q96HY6 314 aa3.97□□□□□ -1.77
RN7SKP43-201ENST00000516173 OXCT2Q9BYC2 517 aaPredicted RBP3.97□□□□□ -1.77
RN7SKP43-201ENST00000516173 NOP58Q9Y2X3 529 aaKnown RBP3.97□□□□□ -1.77
RN7SKP43-201ENST00000516173 VIRMAQ69YN4 1812 aaKnown RBP3.97□□□□□ -1.77
RN7SKP43-201ENST00000516173 ZNF518AQ6AHZ1 1483 aa3.97□□□□□ -1.77
RN7SKP43-201ENST00000516173 NRXN1Q9ULB1 1477 aa3.97□□□□□ -1.77
RN7SKP43-201ENST00000516173 MYOM1P52179 1685 aa3.97□□□□□ -1.77
RN7SKP43-201ENST00000516173 KIDINS220Q9ULH0 1771 aa3.97□□□□□ -1.77
RN7SKP43-201ENST00000516173 TRAPPC8Q9Y2L5 1435 aa3.96□□□□□ -1.77
RN7SKP43-201ENST00000516173 CFAP65Q6ZU64 1925 aaKnown RBP3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 GNB5O14775 395 aa3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 PPM1GO15355 546 aaPredicted RBP3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 DYRK3O43781 588 aa3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 MX2P20592 715 aa3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 PPP2R1AP30153 589 aa3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 IRX6P78412 446 aaPredicted RBP3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 CBLBQ13191 982 aa3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 PDE3AQ14432 1141 aa3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 Q6ZVU0 165 aa3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 CENPQQ7L2Z9 268 aaPredicted RBP3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 TRIM22Q8IYM9 498 aa3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 CCDC116Q8IYX3 515 aa3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 FMNL2Q96PY5 1086 aa3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 PHOX2BQ99453 314 aa3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 BACH2Q9BYV9 841 aa3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 POLMQ9NP87 494 aaPredicted RBP3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 NOP53Q9NZM5 478 aaKnown RBP3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 POLR3AO14802 1390 aaPredicted RBP3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 DISP3Q9P2K9 1392 aa3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 MLH3Q9UHC1 1453 aa3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 ZC3H13Q5T200 1668 aaKnown RBP3.96□□□□□ -1.78
RN7SKP43-201ENST00000516173 ZNF521Q96K83 1311 aa3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 ZFYVE9O95405 1425 aa3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 EFCAB6Q5THR3 1501 aa3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 ERCC6L2Q5T890 1561 aa3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 ADGRL1O94910 1474 aa3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 NSD2O96028 1365 aa3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 ZMYM3Q14202 1370 aa3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 E9PSI1 815 aa3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 CT47B1P0C2W7 299 aaPredicted RBP3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 SLFN5Q08AF3 891 aa3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 CCDC27Q2M243 656 aa3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 LINC00114Q6XXX2 140 aa3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 WDR63Q8IWG1 891 aa3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 AFAP1Q8N556 730 aa3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 TRERF1Q96PN7 1200 aa3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 INSM2Q96T92 566 aaPredicted RBP3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 PNNQ9H307 717 aaKnown RBP3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 C14orf93Q9H972 538 aaKnown RBP3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 MROH1Q8NDA8 1641 aa3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 CGNL1Q0VF96 1302 aa3.95□□□□□ -1.78
RN7SKP43-201ENST00000516173 NKTRP30414 1462 aaKnown RBP3.94□□□□□ -1.78
RN7SKP43-201ENST00000516173 KIF3BO15066 747 aa3.94□□□□□ -1.78
RN7SKP43-201ENST00000516173 GNPATO15228 680 aa3.94□□□□□ -1.78
RN7SKP43-201ENST00000516173 HYAL3O43820 417 aaPredicted RBP3.94□□□□□ -1.78
RN7SKP43-201ENST00000516173 MAP2K3P46734 347 aa3.94□□□□□ -1.78
RN7SKP43-201ENST00000516173 AGERQ15109 404 aa3.94□□□□□ -1.78
RN7SKP43-201ENST00000516173 PRSS36Q5K4E3 855 aa3.94□□□□□ -1.78
RN7SKP43-201ENST00000516173 CC2D1BQ5T0F9 858 aaKnown RBP3.94□□□□□ -1.78
RN7SKP43-201ENST00000516173 DUSP27Q5VZP5 1158 aa3.94□□□□□ -1.78
RN7SKP43-201ENST00000516173 EXOC6Q8TAG9 804 aa3.94□□□□□ -1.78
RN7SKP43-201ENST00000516173 RTN4Q9NQC3 1192 aaKnown RBP3.94□□□□□ -1.78
RN7SKP43-201ENST00000516173 PGPEP1Q9NXJ5 209 aa3.94□□□□□ -1.78
RN7SKP43-201ENST00000516173 MAP4K5Q9Y4K4 846 aa3.94□□□□□ -1.78
RN7SKP43-201ENST00000516173 ARHGAP31Q2M1Z3 1444 aa3.94□□□□□ -1.78
RN7SKP43-201ENST00000516173 ERVK-7P63135 1459 aa3.93□□□□□ -1.78
RN7SKP43-201ENST00000516173 NEO1Q92859 1461 aa3.93□□□□□ -1.78
RN7SKP43-201ENST00000516173 ANKRD26Q9UPS8 1709 aa3.93□□□□□ -1.78
RN7SKP43-201ENST00000516173 PIK3C2BO00750 1634 aa3.93□□□□□ -1.78
RN7SKP43-201ENST00000516173 ABCA6Q8N139 1617 aa3.93□□□□□ -1.78
RN7SKP43-201ENST00000516173 C6orf229H3BNL8 230 aa3.93□□□□□ -1.78
RN7SKP43-201ENST00000516173 EIF5BO60841 1220 aaKnown RBP3.93□□□□□ -1.78
RN7SKP43-201ENST00000516173 C4orf48Q5BLP8 95 aa3.93□□□□□ -1.78
RN7SKP43-201ENST00000516173 VASH1Q7L8A9 365 aaPredicted RBP3.93□□□□□ -1.78
RN7SKP43-201ENST00000516173 BPHLQ86WA6 291 aaPredicted RBP3.93□□□□□ -1.78
RN7SKP43-201ENST00000516173 CFAP53Q96M91 514 aa3.93□□□□□ -1.78
RN7SKP43-201ENST00000516173 SLC52A1Q9NWF4 448 aa3.93□□□□□ -1.78
RN7SKP43-201ENST00000516173 PPRC1Q5VV67 1664 aaKnown RBP3.93□□□□□ -1.78
RN7SKP43-201ENST00000516173 QRICH2Q9H0J4 1663 aa3.93□□□□□ -1.78
RN7SKP43-201ENST00000516173 HECW2Q9P2P5 1572 aa3.93□□□□□ -1.78
RN7SKP43-201ENST00000516173 KDM2BQ8NHM5 1336 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms