RNA–Protein interactions for RNA: ENST00000515885.5

LINC00461-216, long intergenic non-protein coding RNA 461, humanhuman

TSL 5

Gene LINC00461, Length 719 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-216ENST00000515885 ZMYM3Q14202 1370 aa11.01□□□□□ -0.65
LINC00461-216ENST00000515885 CDC42BPBQ9Y5S2 1711 aa11.01□□□□□ -0.65
LINC00461-216ENST00000515885 MLH3Q9UHC1 1453 aa11□□□□□ -0.65
LINC00461-216ENST00000515885 TREHO43280 583 aa11□□□□□ -0.65
LINC00461-216ENST00000515885 ERCC5P28715 1186 aaPredicted RBP11□□□□□ -0.65
LINC00461-216ENST00000515885 SCNN1DP51172 638 aa11□□□□□ -0.65
LINC00461-216ENST00000515885 SH3BP2P78314 561 aa11□□□□□ -0.65
LINC00461-216ENST00000515885 TNS4Q8IZW8 715 aa11□□□□□ -0.65
LINC00461-216ENST00000515885 KCTD15Q96SI1 283 aaPredicted RBP11□□□□□ -0.65
LINC00461-216ENST00000515885 MTRQ99707 1265 aa11□□□□□ -0.65
LINC00461-216ENST00000515885 SAP130Q9H0E3 1048 aa11□□□□□ -0.65
LINC00461-216ENST00000515885 ZNF142P52746 1687 aaPredicted RBP11□□□□□ -0.65
LINC00461-216ENST00000515885 CLIP1P30622 1438 aa11□□□□□ -0.65
LINC00461-216ENST00000515885 ANKRD13DQ6ZTN6 518 aa10.99□□□□□ -0.65
LINC00461-216ENST00000515885 BCL11AQ9H165 835 aa10.99□□□□□ -0.65
LINC00461-216ENST00000515885 ATAD2Q6PL18 1390 aa10.99□□□□□ -0.65
LINC00461-216ENST00000515885 PLA2R1Q13018 1463 aa10.99□□□□□ -0.65
LINC00461-216ENST00000515885 CEP170BQ9Y4F5 1589 aaPredicted RBP10.99□□□□□ -0.65
LINC00461-216ENST00000515885 ITSN2Q9NZM3 1697 aa10.98□□□□□ -0.65
LINC00461-216ENST00000515885 KIDINS220Q9ULH0 1771 aa10.98□□□□□ -0.65
LINC00461-216ENST00000515885 ERVH48-1M5A8F1 160 aa10.98□□□□□ -0.65
LINC00461-216ENST00000515885 EPHA4P54764 986 aa10.98□□□□□ -0.65
LINC00461-216ENST00000515885 INTS6LQ5JSJ4 861 aaKnown RBP10.98□□□□□ -0.65
LINC00461-216ENST00000515885 C9orf131Q5VYM1 1079 aa10.98□□□□□ -0.65
LINC00461-216ENST00000515885 FCF1Q9Y324 198 aaKnown RBP10.98□□□□□ -0.65
LINC00461-216ENST00000515885 SCAMP3O14828 347 aaKnown RBP10.97□□□□□ -0.65
LINC00461-216ENST00000515885 NDUFB5O43674 189 aa10.97□□□□□ -0.65
LINC00461-216ENST00000515885 DSC3Q14574 896 aa10.97□□□□□ -0.65
LINC00461-216ENST00000515885 THSD4Q6ZMP0 1018 aa10.97□□□□□ -0.65
LINC00461-216ENST00000515885 ZNF516Q92618 1163 aa10.97□□□□□ -0.65
LINC00461-216ENST00000515885 TSPAN10Q9H1Z9 355 aaPredicted RBP10.97□□□□□ -0.65
LINC00461-216ENST00000515885 POLR1AO95602 1720 aaPredicted RBP10.97□□□□□ -0.65
LINC00461-216ENST00000515885 CPS1P31327 1500 aa10.96□□□□□ -0.65
LINC00461-216ENST00000515885 TCOF1Q13428 1488 aaKnown RBP10.96□□□□□ -0.65
LINC00461-216ENST00000515885 GDF10P55107 478 aa10.96□□□□□ -0.65
LINC00461-216ENST00000515885 ERVK-9P63128 1117 aa10.96□□□□□ -0.65
LINC00461-216ENST00000515885 UBXN4Q92575 508 aa10.96□□□□□ -0.65
LINC00461-216ENST00000515885 OSBPL3Q9H4L5 887 aa10.96□□□□□ -0.65
LINC00461-216ENST00000515885 RNF19AQ9NV58 838 aa10.96□□□□□ -0.65
LINC00461-216ENST00000515885 CCDC87Q9NVE4 849 aa10.96□□□□□ -0.65
LINC00461-216ENST00000515885 PPP1R1BQ9UD71 204 aaPredicted RBP10.96□□□□□ -0.65
LINC00461-216ENST00000515885 BRPF3Q9ULD4 1205 aa10.96□□□□□ -0.65
LINC00461-216ENST00000515885 TROQ12816 1431 aaPredicted RBP10.95□□□□□ -0.66
LINC00461-216ENST00000515885 PTPRKQ15262 1439 aa10.95□□□□□ -0.66
LINC00461-216ENST00000515885 WASLO00401 505 aaPredicted RBP10.95□□□□□ -0.66
LINC00461-216ENST00000515885 FZD6O60353 706 aa10.95□□□□□ -0.66
LINC00461-216ENST00000515885 IGHA2P01877 340 aa10.95□□□□□ -0.66
LINC00461-216ENST00000515885 RAD51AP2Q09MP3 1159 aa10.95□□□□□ -0.66
LINC00461-216ENST00000515885 C16orf46Q6P387 395 aa10.95□□□□□ -0.66
LINC00461-216ENST00000515885 GGT6Q6P531 493 aa10.95□□□□□ -0.66
LINC00461-216ENST00000515885 FAM161BQ96MY7 647 aa10.95□□□□□ -0.66
LINC00461-216ENST00000515885 PREX2Q70Z35 1606 aa10.95□□□□□ -0.66
LINC00461-216ENST00000515885 ABCC1P33527 1531 aa10.94□□□□□ -0.66
LINC00461-216ENST00000515885 FMN1Q68DA7 1419 aa10.94□□□□□ -0.66
LINC00461-216ENST00000515885 A0A1W2PRU2 124 aa10.94□□□□□ -0.66
LINC00461-216ENST00000515885 S1PR4O95977 384 aa10.94□□□□□ -0.66
LINC00461-216ENST00000515885 EIF1AXP47813 144 aaKnown RBP10.94□□□□□ -0.66
LINC00461-216ENST00000515885 SF3A1Q15459 793 aaKnown RBP10.94□□□□□ -0.66
LINC00461-216ENST00000515885 CC2D2BQ6DHV5 1058 aa10.94□□□□□ -0.66
LINC00461-216ENST00000515885 SHANK2Q9UPX8 1470 aa10.93□□□□□ -0.66
LINC00461-216ENST00000515885 TNFRSF10BO14763 440 aa10.93□□□□□ -0.66
LINC00461-216ENST00000515885 BACH1O14867 736 aa10.93□□□□□ -0.66
LINC00461-216ENST00000515885 LDHBP07195 334 aaKnown RBP10.93□□□□□ -0.66
LINC00461-216ENST00000515885 TJAP1Q5JTD0 557 aa10.93□□□□□ -0.66
LINC00461-216ENST00000515885 VTI1AQ96AJ9 217 aa10.93□□□□□ -0.66
LINC00461-216ENST00000515885 CITED4Q96RK1 184 aa10.93□□□□□ -0.66
LINC00461-216ENST00000515885 PRKD2Q9BZL6 878 aa10.93□□□□□ -0.66
LINC00461-216ENST00000515885 PARP2Q9UGN5 583 aa10.93□□□□□ -0.66
LINC00461-216ENST00000515885 SERTAD1Q9UHV2 236 aa10.93□□□□□ -0.66
LINC00461-216ENST00000515885 INHAP05111 366 aa10.92□□□□□ -0.66
LINC00461-216ENST00000515885 MAPK8P45983 427 aa10.92□□□□□ -0.66
LINC00461-216ENST00000515885 PLCB3Q01970 1234 aa10.92□□□□□ -0.66
LINC00461-216ENST00000515885 EHHADHQ08426 723 aa10.92□□□□□ -0.66
LINC00461-216ENST00000515885 METTL16Q86W50 562 aaKnown RBP10.92□□□□□ -0.66
LINC00461-216ENST00000515885 TMC1Q8TDI8 760 aa10.92□□□□□ -0.66
LINC00461-216ENST00000515885 PIK3R5Q8WYR1 880 aa10.92□□□□□ -0.66
LINC00461-216ENST00000515885 DUSP9Q99956 384 aaKnown RBP10.92□□□□□ -0.66
LINC00461-216ENST00000515885 ETNK1Q9HBU6 452 aa10.92□□□□□ -0.66
LINC00461-216ENST00000515885 DNMT1P26358 1616 aaKnown RBP10.91□□□□□ -0.66
LINC00461-216ENST00000515885 SPAG9O60271 1321 aaKnown RBP10.91□□□□□ -0.66
LINC00461-216ENST00000515885 GPR182O15218 404 aa10.91□□□□□ -0.66
LINC00461-216ENST00000515885 PRPF40AO75400 957 aaKnown RBP10.91□□□□□ -0.66
LINC00461-216ENST00000515885 XPCQ01831 940 aaPredicted RBP10.91□□□□□ -0.66
LINC00461-216ENST00000515885 COX20Q5RI15 118 aa10.91□□□□□ -0.66
LINC00461-216ENST00000515885 FAM129BQ96TA1 746 aa10.91□□□□□ -0.66
LINC00461-216ENST00000515885 IL21Q9HBE4 155 aa10.91□□□□□ -0.66
LINC00461-216ENST00000515885 WWC3Q9ULE0 1092 aa10.91□□□□□ -0.66
LINC00461-216ENST00000515885 MAP4K5Q9Y4K4 846 aa10.91□□□□□ -0.66
LINC00461-216ENST00000515885 CDC42BPAQ5VT25 1732 aa10.9□□□□□ -0.66
LINC00461-216ENST00000515885 LRRIQ1Q96JM4 1722 aa10.9□□□□□ -0.66
LINC00461-216ENST00000515885 A2ML1A8K2U0 1454 aa10.9□□□□□ -0.66
LINC00461-216ENST00000515885 TBCELQ5QJ74 424 aa10.9□□□□□ -0.66
LINC00461-216ENST00000515885 VASH1Q7L8A9 365 aaPredicted RBP10.9□□□□□ -0.66
LINC00461-216ENST00000515885 TMEM87AQ8NBN3 555 aa10.9□□□□□ -0.66
LINC00461-216ENST00000515885 NKX2-3Q8TAU0 364 aa10.9□□□□□ -0.66
LINC00461-216ENST00000515885 DMRTB1Q96MA1 342 aa10.9□□□□□ -0.66
LINC00461-216ENST00000515885 TMPRSS4Q9NRS4 437 aa10.9□□□□□ -0.66
LINC00461-216ENST00000515885 EEA1Q15075 1411 aa10.9□□□□□ -0.66
LINC00461-216ENST00000515885 SAMD9LQ8IVG5 1584 aa10.9□□□□□ -0.67
LINC00461-216ENST00000515885 PPP1R12BO60237 982 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms