RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 PLEKHH2Q8IVE3 1493 aa12.75□□□□□ -0.37
TRIM41-209ENST00000515834 CETN1Q12798 172 aa12.75□□□□□ -0.37
TRIM41-209ENST00000515834 HYPKQ9NX55 129 aa12.75□□□□□ -0.37
TRIM41-209ENST00000515834 IQSEC3Q9UPP2 1182 aaPredicted RBP12.75□□□□□ -0.37
TRIM41-209ENST00000515834 LRRC9Q6ZRR7 1453 aa12.75□□□□□ -0.37
TRIM41-209ENST00000515834 HAND2P61296 217 aa12.75□□□□□ -0.37
TRIM41-209ENST00000515834 RPGRIP1LQ68CZ1 1315 aa12.75□□□□□ -0.37
TRIM41-209ENST00000515834 PPFIA3O75145 1194 aa12.75□□□□□ -0.37
TRIM41-209ENST00000515834 CCDC40Q4G0X9 1142 aa12.75□□□□□ -0.37
TRIM41-209ENST00000515834 LRSAM1Q6UWE0 723 aa12.75□□□□□ -0.37
TRIM41-209ENST00000515834 UTP14AQ9BVJ6 771 aaKnown RBP12.75□□□□□ -0.37
TRIM41-209ENST00000515834 SYNCQ9H7C4 482 aa12.75□□□□□ -0.37
TRIM41-209ENST00000515834 PHAXQ9H814 394 aaKnown RBP12.75□□□□□ -0.37
TRIM41-209ENST00000515834 CWC25Q9NXE8 425 aaPredicted RBP12.75□□□□□ -0.37
TRIM41-209ENST00000515834 KAT6BQ8WYB5 2073 aa12.75□□□□□ -0.37
TRIM41-209ENST00000515834 KIF21BO75037 1637 aa12.75□□□□□ -0.37
TRIM41-209ENST00000515834 LUZP1Q86V48 1076 aa12.75□□□□□ -0.37
TRIM41-209ENST00000515834 ARL1P40616 181 aaPredicted RBP12.74□□□□□ -0.37
TRIM41-209ENST00000515834 PRPF4BQ13523 1007 aaKnown RBP12.74□□□□□ -0.37
TRIM41-209ENST00000515834 TMEM67Q5HYA8 995 aa12.74□□□□□ -0.37
TRIM41-209ENST00000515834 DPH6Q7L8W6 267 aa12.74□□□□□ -0.37
TRIM41-209ENST00000515834 NUP88Q99567 741 aaPredicted RBP12.74□□□□□ -0.37
TRIM41-209ENST00000515834 PUS7Q96PZ0 661 aaKnown RBP12.74□□□□□ -0.37
TRIM41-209ENST00000515834 RPAP2Q8IXW5 612 aaPredicted RBP12.74□□□□□ -0.37
TRIM41-209ENST00000515834 DNAAF4Q8WXU2 420 aa12.74□□□□□ -0.37
TRIM41-209ENST00000515834 TFCP2L1Q9NZI6 479 aa12.74□□□□□ -0.37
TRIM41-209ENST00000515834 HFM1A2PYH4 1435 aa12.74□□□□□ -0.37
TRIM41-209ENST00000515834 MTIF2P46199 727 aaKnown RBP12.74□□□□□ -0.37
TRIM41-209ENST00000515834 IFFO1Q0D2I5 559 aa12.74□□□□□ -0.37
TRIM41-209ENST00000515834 STX8Q9UNK0 236 aa12.74□□□□□ -0.37
TRIM41-209ENST00000515834 ZNF408Q9H9D4 720 aa12.74□□□□□ -0.37
TRIM41-209ENST00000515834 EPRSP07814 1512 aaKnown RBP12.73□□□□□ -0.37
TRIM41-209ENST00000515834 KIF5BP33176 963 aa12.73□□□□□ -0.37
TRIM41-209ENST00000515834 NBPF8Q3BBV2 869 aa12.73□□□□□ -0.37
TRIM41-209ENST00000515834 NBPF14Q5TI25 921 aa12.73□□□□□ -0.37
TRIM41-209ENST00000515834 CCDC12Q8WUD4 166 aaPredicted RBP12.73□□□□□ -0.37
TRIM41-209ENST00000515834 FBXO31Q5XUX0 539 aaPredicted RBP12.73□□□□□ -0.37
TRIM41-209ENST00000515834 PANK2Q9BZ23 570 aa12.73□□□□□ -0.37
TRIM41-209ENST00000515834 TMCO5BA8MYB1 307 aa12.73□□□□□ -0.37
TRIM41-209ENST00000515834 MAP3K11Q16584 847 aa12.73□□□□□ -0.37
TRIM41-209ENST00000515834 CCDC174Q6PII3 467 aa12.73□□□□□ -0.37
TRIM41-209ENST00000515834 IFNL2Q8IZJ0 200 aa12.73□□□□□ -0.37
TRIM41-209ENST00000515834 FAM212AQ96EL1 285 aa12.73□□□□□ -0.37
TRIM41-209ENST00000515834 TSPY3P0CV98 308 aa12.73□□□□□ -0.37
TRIM41-209ENST00000515834 TSPY8P0CW00 308 aa12.73□□□□□ -0.37
TRIM41-209ENST00000515834 TCP11L1Q9NUJ3 509 aa12.73□□□□□ -0.37
TRIM41-209ENST00000515834 TAF12Q16514 161 aa12.73□□□□□ -0.37
TRIM41-209ENST00000515834 CCDC152Q4G0S7 254 aa12.73□□□□□ -0.37
TRIM41-209ENST00000515834 CNNM3Q8NE01 707 aa12.73□□□□□ -0.37
TRIM41-209ENST00000515834 INCENPQ9NQS7 918 aa12.73□□□□□ -0.37
TRIM41-209ENST00000515834 TTC21AQ8NDW8 1320 aa12.72□□□□□ -0.37
TRIM41-209ENST00000515834 GSTO1P78417 241 aa12.72□□□□□ -0.37
TRIM41-209ENST00000515834 TEX13AQ9BXU3 409 aaPredicted RBP12.72□□□□□ -0.37
TRIM41-209ENST00000515834 EMILIN1Q9Y6C2 1016 aa12.72□□□□□ -0.37
TRIM41-209ENST00000515834 PARP3Q9Y6F1 533 aa12.72□□□□□ -0.37
TRIM41-209ENST00000515834 GJA3Q9Y6H8 435 aa12.72□□□□□ -0.37
TRIM41-209ENST00000515834 LMOD1P29536 600 aaPredicted RBP12.72□□□□□ -0.37
TRIM41-209ENST00000515834 STXBP4Q6ZWJ1 553 aa12.72□□□□□ -0.37
TRIM41-209ENST00000515834 CRNKL1Q9BZJ0 848 aaKnown RBP12.72□□□□□ -0.37
TRIM41-209ENST00000515834 RIMBP2O15034 1052 aa12.72□□□□□ -0.37
TRIM41-209ENST00000515834 PHACTR2O75167 634 aa12.72□□□□□ -0.37
TRIM41-209ENST00000515834 MFSD6Q6ZSS7 791 aa12.72□□□□□ -0.37
TRIM41-209ENST00000515834 ANKRD24Q8TF21 1146 aa12.72□□□□□ -0.37
TRIM41-209ENST00000515834 TTF1Q15361 905 aaPredicted RBP12.72□□□□□ -0.37
TRIM41-209ENST00000515834 OTUD6BQ8N6M0 293 aa12.72□□□□□ -0.37
TRIM41-209ENST00000515834 MICU3Q86XE3 530 aa12.71□□□□□ -0.37
TRIM41-209ENST00000515834 RGS22Q8NE09 1264 aa12.71□□□□□ -0.37
TRIM41-209ENST00000515834 SNAPC4Q5SXM2 1469 aa12.71□□□□□ -0.37
TRIM41-209ENST00000515834 UBE3BQ7Z3V4 1068 aa12.71□□□□□ -0.37
TRIM41-209ENST00000515834 FERMT1Q9BQL6 677 aa12.71□□□□□ -0.37
TRIM41-209ENST00000515834 NOP2P46087 812 aaKnown RBP12.71□□□□□ -0.38
TRIM41-209ENST00000515834 JDP2Q8WYK2 163 aa12.71□□□□□ -0.38
TRIM41-209ENST00000515834 DBF4Q9UBU7 674 aaPredicted RBP12.71□□□□□ -0.38
TRIM41-209ENST00000515834 CASQ1P31415 396 aa12.71□□□□□ -0.38
TRIM41-209ENST00000515834 ZMYND15Q9H091 742 aa12.71□□□□□ -0.38
TRIM41-209ENST00000515834 CASKIN1Q8WXD9 1431 aa12.71□□□□□ -0.38
TRIM41-209ENST00000515834 TBCAO75347 108 aaKnown RBP12.7□□□□□ -0.38
TRIM41-209ENST00000515834 RFX1P22670 979 aa12.7□□□□□ -0.38
TRIM41-209ENST00000515834 SMC1AQ14683 1233 aaKnown RBP12.7□□□□□ -0.38
TRIM41-209ENST00000515834 TSNARE1Q96NA8 513 aa12.7□□□□□ -0.38
TRIM41-209ENST00000515834 MRC2Q9UBG0 1479 aa12.7□□□□□ -0.38
TRIM41-209ENST00000515834 AMPD3Q01432 767 aa12.7□□□□□ -0.38
TRIM41-209ENST00000515834 ISM2Q6H9L7 571 aa12.7□□□□□ -0.38
TRIM41-209ENST00000515834 SLC26A6Q9BXS9 759 aa12.7□□□□□ -0.38
TRIM41-209ENST00000515834 MSH6P52701 1360 aa12.7□□□□□ -0.38
TRIM41-209ENST00000515834 KIAA1107Q9UPP5 1409 aa12.7□□□□□ -0.38
TRIM41-209ENST00000515834 CEP63Q96MT8 703 aa12.7□□□□□ -0.38
TRIM41-209ENST00000515834 CD109Q6YHK3 1445 aa12.7□□□□□ -0.38
TRIM41-209ENST00000515834 STX6O43752 255 aa12.7□□□□□ -0.38
TRIM41-209ENST00000515834 CRACR2AQ9BSW2 395 aa12.7□□□□□ -0.38
TRIM41-209ENST00000515834 SERPINA10Q9UK55 444 aa12.7□□□□□ -0.38
TRIM41-209ENST00000515834 HMGB1P09429 215 aaKnown RBP12.69□□□□□ -0.38
TRIM41-209ENST00000515834 TOP1P11387 765 aaKnown RBP12.69□□□□□ -0.38
TRIM41-209ENST00000515834 CCDC66A2RUB6 948 aa12.69□□□□□ -0.38
TRIM41-209ENST00000515834 KIF5CO60282 957 aa12.69□□□□□ -0.38
TRIM41-209ENST00000515834 CYP7A1P22680 504 aa12.69□□□□□ -0.38
TRIM41-209ENST00000515834 TCHPQ9BT92 498 aa12.69□□□□□ -0.38
TRIM41-209ENST00000515834 BIN1O00499 593 aa12.68□□□□□ -0.38
TRIM41-209ENST00000515834 USO1O60763 962 aaKnown RBP12.68□□□□□ -0.38
TRIM41-209ENST00000515834 CALM1P0DP23 149 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms