RNA–Protein interactions for RNA: ENST00000515663.5

CAST-244, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-244ENST00000515663 SEPT12Q8IYM1 358 aa11.09□□□□□ -0.63
CAST-244ENST00000515663 SYTL4Q96C24 671 aaPredicted RBP11.09□□□□□ -0.63
CAST-244ENST00000515663 GCC1Q96CN9 775 aa11.09□□□□□ -0.63
CAST-244ENST00000515663 ACSBG1Q96GR2 724 aa11.09□□□□□ -0.63
CAST-244ENST00000515663 DCTPP1Q9H773 170 aa11.09□□□□□ -0.63
CAST-244ENST00000515663 IGKV5-2P06315 115 aa11.08□□□□□ -0.64
CAST-244ENST00000515663 ZNF772Q68DY9 489 aaPredicted RBP11.08□□□□□ -0.64
CAST-244ENST00000515663 ANP32EQ9BTT0 268 aa11.08□□□□□ -0.64
CAST-244ENST00000515663 C1orf115Q9H7X2 142 aa11.08□□□□□ -0.64
CAST-244ENST00000515663 LOC102724428A0A0B4J2F2 783 aa11.07□□□□□ -0.64
CAST-244ENST00000515663 SIK1P57059 783 aa11.07□□□□□ -0.64
CAST-244ENST00000515663 ATP8B2P98198 1209 aa11.07□□□□□ -0.64
CAST-244ENST00000515663 AIMP1Q12904 312 aaKnown RBP11.07□□□□□ -0.64
CAST-244ENST00000515663 MTX1Q13505 466 aa11.07□□□□□ -0.64
CAST-244ENST00000515663 RIC3Q7Z5B4 369 aa11.07□□□□□ -0.64
CAST-244ENST00000515663 PDZRN3Q9UPQ7 1066 aa11.07□□□□□ -0.64
CAST-244ENST00000515663 HDAC5Q9UQL6 1122 aa11.07□□□□□ -0.64
CAST-244ENST00000515663 TJP1Q07157 1748 aa11.07□□□□□ -0.64
CAST-244ENST00000515663 COL15A1P39059 1388 aa11.07□□□□□ -0.64
CAST-244ENST00000515663 PALLDQ8WX93 1383 aa11.07□□□□□ -0.64
CAST-244ENST00000515663 NEURL1BA8MQ27 555 aa11.06□□□□□ -0.64
CAST-244ENST00000515663 NBPF7P0C2Y1 421 aaPredicted RBP11.06□□□□□ -0.64
CAST-244ENST00000515663 UBTFL1P0CB47 393 aaPredicted RBP11.06□□□□□ -0.64
CAST-244ENST00000515663 IL6STP40189 918 aaPredicted RBP11.06□□□□□ -0.64
CAST-244ENST00000515663 PIP4K2AP48426 406 aaPredicted RBP11.06□□□□□ -0.64
CAST-244ENST00000515663 NUCB1Q02818 461 aa11.06□□□□□ -0.64
CAST-244ENST00000515663 TTLL7Q6ZT98 887 aa11.06□□□□□ -0.64
CAST-244ENST00000515663 BCL11AQ9H165 835 aa11.06□□□□□ -0.64
CAST-244ENST00000515663 NHSQ6T4R5 1651 aa11.06□□□□□ -0.64
CAST-244ENST00000515663 RREB1Q92766 1687 aa11.06□□□□□ -0.64
CAST-244ENST00000515663 GRM8O00222 908 aa11.06□□□□□ -0.64
CAST-244ENST00000515663 MYCNP04198 464 aaPredicted RBP11.06□□□□□ -0.64
CAST-244ENST00000515663 RBM6P78332 1123 aaKnown RBP11.06□□□□□ -0.64
CAST-244ENST00000515663 NEXNQ0ZGT2 675 aa11.06□□□□□ -0.64
CAST-244ENST00000515663 TRIM28Q13263 835 aaKnown RBP11.06□□□□□ -0.64
CAST-244ENST00000515663 GCKRQ14397 625 aa11.06□□□□□ -0.64
CAST-244ENST00000515663 CWF19L2Q2TBE0 894 aaKnown RBP11.06□□□□□ -0.64
CAST-244ENST00000515663 INTS5Q6P9B9 1019 aaKnown RBP11.06□□□□□ -0.64
CAST-244ENST00000515663 HMMRO75330 724 aa11.05□□□□□ -0.64
CAST-244ENST00000515663 EIF5P55010 431 aaKnown RBP11.05□□□□□ -0.64
CAST-244ENST00000515663 ITPK1Q13572 414 aa11.05□□□□□ -0.64
CAST-244ENST00000515663 POLA2Q14181 598 aa11.05□□□□□ -0.64
CAST-244ENST00000515663 SSH3Q8TE77 659 aa11.05□□□□□ -0.64
CAST-244ENST00000515663 LRRFIP2Q9Y608 721 aaKnown RBP11.05□□□□□ -0.64
CAST-244ENST00000515663 A0A0G2JS52 829 aa11.04□□□□□ -0.64
CAST-244ENST00000515663 ERVV-1B6SEH8 477 aa11.04□□□□□ -0.64
CAST-244ENST00000515663 ATP6V1AP38606 617 aa11.04□□□□□ -0.64
CAST-244ENST00000515663 CASP7P55210 303 aa11.04□□□□□ -0.64
CAST-244ENST00000515663 PTF1AQ7RTS3 328 aa11.04□□□□□ -0.64
CAST-244ENST00000515663 KAZALD1Q96I82 304 aa11.04□□□□□ -0.64
CAST-244ENST00000515663 MYD88Q99836 296 aa11.04□□□□□ -0.64
CAST-244ENST00000515663 ISCA1Q9BUE6 129 aa11.04□□□□□ -0.64
CAST-244ENST00000515663 ZBTB1Q9Y2K1 713 aa11.04□□□□□ -0.64
CAST-244ENST00000515663 PNMA6EA0A0J9YXQ4 647 aa11.03□□□□□ -0.64
CAST-244ENST00000515663 H7C1W4 665 aa11.03□□□□□ -0.64
CAST-244ENST00000515663 TCIRG1Q13488 830 aa11.03□□□□□ -0.64
CAST-244ENST00000515663 RC3H1Q5TC82 1133 aaKnown RBP11.03□□□□□ -0.64
CAST-244ENST00000515663 FAM196AQ6ZSG2 479 aa11.03□□□□□ -0.64
CAST-244ENST00000515663 CHD1LQ86WJ1 897 aa11.03□□□□□ -0.64
CAST-244ENST00000515663 SKAP1Q86WV1 359 aa11.03□□□□□ -0.64
CAST-244ENST00000515663 CCDC191Q8NCU4 936 aa11.03□□□□□ -0.64
CAST-244ENST00000515663 BCL11BQ9C0K0 894 aaPredicted RBP11.03□□□□□ -0.64
CAST-244ENST00000515663 TSHZ2Q9NRE2 1034 aa11.03□□□□□ -0.64
CAST-244ENST00000515663 CCDC87Q9NVE4 849 aa11.03□□□□□ -0.64
CAST-244ENST00000515663 C9orf78Q9NZ63 289 aaPredicted RBP11.03□□□□□ -0.64
CAST-244ENST00000515663 MAP3K15Q6ZN16 1313 aa11.03□□□□□ -0.64
CAST-244ENST00000515663 NUP188Q5SRE5 1749 aa11.03□□□□□ -0.64
CAST-244ENST00000515663 ARFGEF2Q9Y6D5 1785 aa11.03□□□□□ -0.64
CAST-244ENST00000515663 RGL2O15211 777 aa11.02□□□□□ -0.65
CAST-244ENST00000515663 PDE4AP27815 886 aa11.02□□□□□ -0.65
CAST-244ENST00000515663 CRKLP46109 303 aaKnown RBP11.02□□□□□ -0.65
CAST-244ENST00000515663 GIGYF2Q6Y7W6 1299 aaKnown RBP11.02□□□□□ -0.65
CAST-244ENST00000515663 KRT27Q7Z3Y8 459 aa11.02□□□□□ -0.65
CAST-244ENST00000515663 CNTNAP4Q9C0A0 1308 aa11.01□□□□□ -0.65
CAST-244ENST00000515663 NOP58Q9Y2X3 529 aaKnown RBP11.01□□□□□ -0.65
CAST-244ENST00000515663 RABL6Q3YEC7 729 aaPredicted RBP11□□□□□ -0.65
CAST-244ENST00000515663 HSP90AB3PQ58FF7 597 aa11□□□□□ -0.65
CAST-244ENST00000515663 FAM182BQ5T319 152 aa11□□□□□ -0.65
CAST-244ENST00000515663 KIF6Q6ZMV9 814 aa11□□□□□ -0.65
CAST-244ENST00000515663 PPP1R42Q7Z4L9 355 aa11□□□□□ -0.65
CAST-244ENST00000515663 SUCLG2Q96I99 432 aa11□□□□□ -0.65
CAST-244ENST00000515663 RGS17Q9UGC6 210 aaPredicted RBP11□□□□□ -0.65
CAST-244ENST00000515663 SBF2Q86WG5 1849 aa11□□□□□ -0.65
CAST-244ENST00000515663 COL5A3P25940 1745 aaPredicted RBP11□□□□□ -0.65
CAST-244ENST00000515663 BTAF1O14981 1849 aa11□□□□□ -0.65
CAST-244ENST00000515663 ATP5J2-PTCD1G3V325 749 aa11□□□□□ -0.65
CAST-244ENST00000515663 ANKRD45Q5TZF3 282 aa11□□□□□ -0.65
CAST-244ENST00000515663 LINC00116Q8NCU8 138 aa11□□□□□ -0.65
CAST-244ENST00000515663 ZBTB3Q9H5J0 574 aa11□□□□□ -0.65
CAST-244ENST00000515663 CWC25Q9NXE8 425 aaPredicted RBP11□□□□□ -0.65
CAST-244ENST00000515663 A0A087WZG4 1122 aa10.99□□□□□ -0.65
CAST-244ENST00000515663 RAB11FIP3O75154 756 aa10.99□□□□□ -0.65
CAST-244ENST00000515663 RGS3P49796 1198 aa10.99□□□□□ -0.65
CAST-244ENST00000515663 HLFQ16534 295 aa10.99□□□□□ -0.65
CAST-244ENST00000515663 DZIP3Q86Y13 1208 aaKnown RBP10.99□□□□□ -0.65
CAST-244ENST00000515663 ZNF34Q8IZ26 560 aa10.99□□□□□ -0.65
CAST-244ENST00000515663 LY75O60449 1722 aa10.98□□□□□ -0.65
CAST-244ENST00000515663 SRGAP3O43295 1099 aa10.98□□□□□ -0.65
CAST-244ENST00000515663 RPS6KA4O75676 772 aa10.98□□□□□ -0.65
CAST-244ENST00000515663 CAMTA2O94983 1202 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms