RNA–Protein interactions for RNA: ENST00000515621.5

NR1I3-234, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-234ENST00000515621 TJP1Q07157 1748 aa11.4□□□□□ -0.58
NR1I3-234ENST00000515621 PRAMEF22A3QJZ6 481 aa11.39□□□□□ -0.59
NR1I3-234ENST00000515621 PTCD1O75127 700 aaKnown RBP11.39□□□□□ -0.59
NR1I3-234ENST00000515621 NEXNQ0ZGT2 675 aa11.39□□□□□ -0.59
NR1I3-234ENST00000515621 GSE1Q14687 1217 aa11.39□□□□□ -0.59
NR1I3-234ENST00000515621 SMC5Q8IY18 1101 aa11.39□□□□□ -0.59
NR1I3-234ENST00000515621 PLBD2Q8NHP8 589 aa11.39□□□□□ -0.59
NR1I3-234ENST00000515621 NECTIN2Q92692 538 aa11.39□□□□□ -0.59
NR1I3-234ENST00000515621 GCC1Q96CN9 775 aa11.39□□□□□ -0.59
NR1I3-234ENST00000515621 CLEC11AQ9Y240 323 aa11.39□□□□□ -0.59
NR1I3-234ENST00000515621 PALLDQ8WX93 1383 aa11.39□□□□□ -0.59
NR1I3-234ENST00000515621 UTYO14607 1347 aa11.38□□□□□ -0.59
NR1I3-234ENST00000515621 F6X3S4 739 aa11.38□□□□□ -0.59
NR1I3-234ENST00000515621 HMMRO75330 724 aa11.38□□□□□ -0.59
NR1I3-234ENST00000515621 GNAI2P04899 355 aa11.38□□□□□ -0.59
NR1I3-234ENST00000515621 RBM6P78332 1123 aaKnown RBP11.38□□□□□ -0.59
NR1I3-234ENST00000515621 PROSER3Q2NL68 480 aa11.38□□□□□ -0.59
NR1I3-234ENST00000515621 SLC4A10Q6U841 1118 aa11.38□□□□□ -0.59
NR1I3-234ENST00000515621 ANKRD44Q8N8A2 993 aa11.38□□□□□ -0.59
NR1I3-234ENST00000515621 METTL22Q9BUU2 404 aaPredicted RBP11.38□□□□□ -0.59
NR1I3-234ENST00000515621 UBTFL1P0CB47 393 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-234ENST00000515621 CYP19A1P11511 503 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-234ENST00000515621 IL6STP40189 918 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-234ENST00000515621 ANKRD13DQ6ZTN6 518 aa11.37□□□□□ -0.59
NR1I3-234ENST00000515621 SEPT12Q8IYM1 358 aa11.37□□□□□ -0.59
NR1I3-234ENST00000515621 XAGE3Q8WTP9 111 aa11.37□□□□□ -0.59
NR1I3-234ENST00000515621 MAP3K2Q9Y2U5 619 aa11.37□□□□□ -0.59
NR1I3-234ENST00000515621 LOC102724428A0A0B4J2F2 783 aa11.36□□□□□ -0.59
NR1I3-234ENST00000515621 A0A0G2JS52 829 aa11.36□□□□□ -0.59
NR1I3-234ENST00000515621 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
NR1I3-234ENST00000515621 IGHDP01880 384 aa11.36□□□□□ -0.59
NR1I3-234ENST00000515621 SIK1P57059 783 aa11.36□□□□□ -0.59
NR1I3-234ENST00000515621 MYT1Q01538 1121 aa11.36□□□□□ -0.59
NR1I3-234ENST00000515621 MTX1Q13505 466 aa11.36□□□□□ -0.59
NR1I3-234ENST00000515621 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
NR1I3-234ENST00000515621 NBPF10Q6P3W6 841 aaKnown RBP11.36□□□□□ -0.59
NR1I3-234ENST00000515621 COPS6Q7L5N1 327 aa11.36□□□□□ -0.59
NR1I3-234ENST00000515621 RIC3Q7Z5B4 369 aa11.36□□□□□ -0.59
NR1I3-234ENST00000515621 NBPF15Q8N660 670 aa11.36□□□□□ -0.59
NR1I3-234ENST00000515621 SYTL4Q96C24 671 aaPredicted RBP11.36□□□□□ -0.59
NR1I3-234ENST00000515621 MEIS3Q99687 375 aa11.36□□□□□ -0.59
NR1I3-234ENST00000515621 USP44Q9H0E7 712 aa11.36□□□□□ -0.59
NR1I3-234ENST00000515621 NUP188Q5SRE5 1749 aa11.35□□□□□ -0.59
NR1I3-234ENST00000515621 ERVV-1B6SEH8 477 aa11.35□□□□□ -0.59
NR1I3-234ENST00000515621 MYL6BP14649 208 aa11.35□□□□□ -0.59
NR1I3-234ENST00000515621 TRIM28Q13263 835 aaKnown RBP11.35□□□□□ -0.59
NR1I3-234ENST00000515621 CEP85Q6P2H3 762 aa11.35□□□□□ -0.59
NR1I3-234ENST00000515621 FAM196AQ6ZSG2 479 aa11.35□□□□□ -0.59
NR1I3-234ENST00000515621 DNAJC10Q8IXB1 793 aa11.35□□□□□ -0.59
NR1I3-234ENST00000515621 ARFGEF2Q9Y6D5 1785 aa11.35□□□□□ -0.59
NR1I3-234ENST00000515621 COL5A3P25940 1745 aaPredicted RBP11.35□□□□□ -0.59
NR1I3-234ENST00000515621 CNTNAP4Q9C0A0 1308 aa11.35□□□□□ -0.59
NR1I3-234ENST00000515621 ANXA1P04083 346 aa11.34□□□□□ -0.59
NR1I3-234ENST00000515621 PRR29P0C7W0 189 aa11.34□□□□□ -0.59
NR1I3-234ENST00000515621 HSP90AB3PQ58FF7 597 aa11.34□□□□□ -0.59
NR1I3-234ENST00000515621 RC3H1Q5TC82 1133 aaKnown RBP11.34□□□□□ -0.59
NR1I3-234ENST00000515621 SLC4A9Q96Q91 983 aa11.34□□□□□ -0.59
NR1I3-234ENST00000515621 BCL11BQ9C0K0 894 aaPredicted RBP11.34□□□□□ -0.59
NR1I3-234ENST00000515621 CCDC87Q9NVE4 849 aa11.34□□□□□ -0.59
NR1I3-234ENST00000515621 BTAF1O14981 1849 aa11.33□□□□□ -0.6
NR1I3-234ENST00000515621 NEURL1BA8MQ27 555 aa11.33□□□□□ -0.6
NR1I3-234ENST00000515621 GRM8O00222 908 aa11.33□□□□□ -0.6
NR1I3-234ENST00000515621 A1BGP04217 495 aa11.33□□□□□ -0.6
NR1I3-234ENST00000515621 KIF6Q6ZMV9 814 aa11.33□□□□□ -0.6
NR1I3-234ENST00000515621 KRT27Q7Z3Y8 459 aa11.33□□□□□ -0.6
NR1I3-234ENST00000515621 SPRYD3Q8NCJ5 442 aa11.33□□□□□ -0.6
NR1I3-234ENST00000515621 CCDC191Q8NCU4 936 aa11.33□□□□□ -0.6
NR1I3-234ENST00000515621 ACSBG1Q96GR2 724 aa11.33□□□□□ -0.6
NR1I3-234ENST00000515621 DCTPP1Q9H773 170 aa11.33□□□□□ -0.6
NR1I3-234ENST00000515621 MAP3K15Q6ZN16 1313 aa11.33□□□□□ -0.6
NR1I3-234ENST00000515621 SBF2Q86WG5 1849 aa11.32□□□□□ -0.6
NR1I3-234ENST00000515621 LY75O60449 1722 aa11.32□□□□□ -0.6
NR1I3-234ENST00000515621 A0A087WZG4 1122 aa11.32□□□□□ -0.6
NR1I3-234ENST00000515621 IGKV5-2P06315 115 aa11.32□□□□□ -0.6
NR1I3-234ENST00000515621 ATP6V1AP38606 617 aa11.32□□□□□ -0.6
NR1I3-234ENST00000515621 ATP8B2P98198 1209 aa11.32□□□□□ -0.6
NR1I3-234ENST00000515621 NUCB1Q02818 461 aa11.32□□□□□ -0.6
NR1I3-234ENST00000515621 AIMP1Q12904 312 aaKnown RBP11.32□□□□□ -0.6
NR1I3-234ENST00000515621 GCKRQ14397 625 aa11.32□□□□□ -0.6
NR1I3-234ENST00000515621 GIGYF2Q6Y7W6 1299 aaKnown RBP11.32□□□□□ -0.6
NR1I3-234ENST00000515621 NPM2Q86SE8 214 aaKnown RBP11.32□□□□□ -0.6
NR1I3-234ENST00000515621 SIRT2Q8IXJ6 389 aa11.32□□□□□ -0.6
NR1I3-234ENST00000515621 SSH3Q8TE77 659 aa11.32□□□□□ -0.6
NR1I3-234ENST00000515621 C9orf78Q9NZ63 289 aaPredicted RBP11.32□□□□□ -0.6
NR1I3-234ENST00000515621 KCNQ2O43526 872 aa11.31□□□□□ -0.6
NR1I3-234ENST00000515621 CRKLP46109 303 aaKnown RBP11.31□□□□□ -0.6
NR1I3-234ENST00000515621 EIF5P55010 431 aaKnown RBP11.31□□□□□ -0.6
NR1I3-234ENST00000515621 HSP90AB4PQ58FF6 505 aa11.31□□□□□ -0.6
NR1I3-234ENST00000515621 SLC27A3Q5K4L6 730 aa11.31□□□□□ -0.6
NR1I3-234ENST00000515621 TCIRG1Q13488 830 aa11.3□□□□□ -0.6
NR1I3-234ENST00000515621 DCAF8Q5TAQ9 597 aa11.3□□□□□ -0.6
NR1I3-234ENST00000515621 INTS5Q6P9B9 1019 aaKnown RBP11.3□□□□□ -0.6
NR1I3-234ENST00000515621 ISCA1Q9BUE6 129 aa11.3□□□□□ -0.6
NR1I3-234ENST00000515621 CWC25Q9NXE8 425 aaPredicted RBP11.3□□□□□ -0.6
NR1I3-234ENST00000515621 RGPD3A6NKT7 1758 aaPredicted RBP11.29□□□□□ -0.6
NR1I3-234ENST00000515621 RGPD4Q7Z3J3 1758 aa11.29□□□□□ -0.6
NR1I3-234ENST00000515621 RAB11FIP3O75154 756 aa11.29□□□□□ -0.6
NR1I3-234ENST00000515621 NBPF7P0C2Y1 421 aaPredicted RBP11.29□□□□□ -0.6
NR1I3-234ENST00000515621 RXRBP28702 533 aa11.29□□□□□ -0.6
NR1I3-234ENST00000515621 CLEC4GQ6UXB4 293 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms