RNA–Protein interactions for RNA: ENST00000515483.5

TNPO1-210, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-210ENST00000515483 CCDC93Q567U6 631 aa20.27■□□□□ 0.84
TNPO1-210ENST00000515483 NPM2Q86SE8 214 aaKnown RBP20.27■□□□□ 0.84
TNPO1-210ENST00000515483 MRC1P22897 1456 aa20.26■□□□□ 0.83
TNPO1-210ENST00000515483 MAP1SQ66K74 1059 aaPredicted RBP20.26■□□□□ 0.83
TNPO1-210ENST00000515483 TTC5Q8N0Z6 440 aa20.26■□□□□ 0.83
TNPO1-210ENST00000515483 TEX13AQ9BXU3 409 aaPredicted RBP20.26■□□□□ 0.83
TNPO1-210ENST00000515483 ANKRD31Q8N7Z5 1873 aa20.25■□□□□ 0.83
TNPO1-210ENST00000515483 IL13P35225 146 aa20.25■□□□□ 0.83
TNPO1-210ENST00000515483 ECE1P42892 770 aa20.25■□□□□ 0.83
TNPO1-210ENST00000515483 MORC1Q86VD1 984 aa20.25■□□□□ 0.83
TNPO1-210ENST00000515483 TBC1D2BQ9UPU7 963 aa20.25■□□□□ 0.83
TNPO1-210ENST00000515483 ZNF330Q9Y3S2 320 aaPredicted RBP20.25■□□□□ 0.83
TNPO1-210ENST00000515483 FKBP4Q02790 459 aaKnown RBP eCLIP20.24■□□□□ 0.83
TNPO1-210ENST00000515483 C7orf43Q8WVR3 580 aa20.24■□□□□ 0.83
TNPO1-210ENST00000515483 ZNF541Q9H0D2 1346 aa20.24■□□□□ 0.83
TNPO1-210ENST00000515483 IL6STP40189 918 aaPredicted RBP20.23■□□□□ 0.83
TNPO1-210ENST00000515483 SLX4Q8IY92 1834 aa20.23■□□□□ 0.83
TNPO1-210ENST00000515483 COL11A2P13942 1736 aaPredicted RBP20.22■□□□□ 0.83
TNPO1-210ENST00000515483 RTKN2Q8IZC4 609 aa20.22■□□□□ 0.83
TNPO1-210ENST00000515483 DDX21Q9NR30 783 aaKnown RBP eCLIP20.22■□□□□ 0.83
TNPO1-210ENST00000515483 ZNF277Q9NRM2 450 aaPredicted RBP20.22■□□□□ 0.83
TNPO1-210ENST00000515483 RNF123Q5XPI4 1314 aa20.22■□□□□ 0.83
TNPO1-210ENST00000515483 NPR1P16066 1061 aa20.21■□□□□ 0.83
TNPO1-210ENST00000515483 PAXIP1Q6ZW49 1069 aaPredicted RBP20.21■□□□□ 0.83
TNPO1-210ENST00000515483 CAPNS2Q96L46 248 aa20.21■□□□□ 0.83
TNPO1-210ENST00000515483 GPR101Q96P66 508 aaPredicted RBP20.21■□□□□ 0.83
TNPO1-210ENST00000515483 FZD9O00144 591 aa20.2■□□□□ 0.82
TNPO1-210ENST00000515483 GPC2Q8N158 579 aa20.2■□□□□ 0.82
TNPO1-210ENST00000515483 PANK3Q9H999 370 aa20.2■□□□□ 0.82
TNPO1-210ENST00000515483 CAMTA2O94983 1202 aa20.19■□□□□ 0.82
TNPO1-210ENST00000515483 CFAP44Q96MT7 982 aa20.19■□□□□ 0.82
TNPO1-210ENST00000515483 ADAMTSL1Q8N6G6 1762 aa20.18■□□□□ 0.82
TNPO1-210ENST00000515483 NBPF5PQ86XG9 351 aaPredicted RBP20.18■□□□□ 0.82
TNPO1-210ENST00000515483 ZNF496Q96IT1 587 aaPredicted RBP20.18■□□□□ 0.82
TNPO1-210ENST00000515483 CA12O43570 354 aa20.17■□□□□ 0.82
TNPO1-210ENST00000515483 IARSP41252 1262 aaKnown RBP20.17■□□□□ 0.82
TNPO1-210ENST00000515483 GRM1Q13255 1194 aa20.17■□□□□ 0.82
TNPO1-210ENST00000515483 MTHFSDQ2M296 383 aaKnown RBP20.17■□□□□ 0.82
TNPO1-210ENST00000515483 JDP2Q8WYK2 163 aa20.17■□□□□ 0.82
TNPO1-210ENST00000515483 HEG1Q9ULI3 1381 aa20.17■□□□□ 0.82
TNPO1-210ENST00000515483 HMOX1P09601 288 aa20.16■□□□□ 0.82
TNPO1-210ENST00000515483 LMOD1P29536 600 aaPredicted RBP20.16■□□□□ 0.82
TNPO1-210ENST00000515483 MAP2K2P36507 400 aa20.16■□□□□ 0.82
TNPO1-210ENST00000515483 CYP4F22Q6NT55 531 aa20.16■□□□□ 0.82
TNPO1-210ENST00000515483 ZNF790Q6PG37 636 aa20.16■□□□□ 0.82
TNPO1-210ENST00000515483 SCN7AQ01118 1682 aa20.16■□□□□ 0.82
TNPO1-210ENST00000515483 KLRG2A4D1S0 409 aaPredicted RBP20.15■□□□□ 0.82
TNPO1-210ENST00000515483 TEFQ10587 303 aa20.15■□□□□ 0.82
TNPO1-210ENST00000515483 CLEC4GQ6UXB4 293 aa20.15■□□□□ 0.82
TNPO1-210ENST00000515483 DZIP3Q86Y13 1208 aaKnown RBP20.15■□□□□ 0.82
TNPO1-210ENST00000515483 SYNE4Q8N205 404 aa20.15■□□□□ 0.82
TNPO1-210ENST00000515483 ARFGEF2Q9Y6D5 1785 aa20.14■□□□□ 0.81
TNPO1-210ENST00000515483 A1BGP04217 495 aa20.14■□□□□ 0.81
TNPO1-210ENST00000515483 MCOLN1Q9GZU1 580 aa20.14■□□□□ 0.81
TNPO1-210ENST00000515483 ALDH1B1P30837 517 aa20.13■□□□□ 0.81
TNPO1-210ENST00000515483 EIF6P56537 245 aaKnown RBP20.13■□□□□ 0.81
TNPO1-210ENST00000515483 TPTE2Q6XPS3 522 aa20.13■□□□□ 0.81
TNPO1-210ENST00000515483 FMNL2Q96PY5 1086 aa20.13■□□□□ 0.81
TNPO1-210ENST00000515483 TSKSQ9UJT2 592 aa20.13■□□□□ 0.81
TNPO1-210ENST00000515483 ZNF652Q9Y2D9 606 aa20.13■□□□□ 0.81
TNPO1-210ENST00000515483 TLL2Q9Y6L7 1015 aa20.13■□□□□ 0.81
TNPO1-210ENST00000515483 UBR2Q8IWV8 1755 aa20.13■□□□□ 0.81
TNPO1-210ENST00000515483 OLFM4Q6UX06 510 aa20.12■□□□□ 0.81
TNPO1-210ENST00000515483 GJA3Q9Y6H8 435 aa20.12■□□□□ 0.81
TNPO1-210ENST00000515483 THSD7BQ9C0I4 1608 aa20.12■□□□□ 0.81
TNPO1-210ENST00000515483 CACNA1SQ13698 1873 aa20.11■□□□□ 0.81
TNPO1-210ENST00000515483 CST9Q5W186 159 aa20.11■□□□□ 0.81
TNPO1-210ENST00000515483 USP50Q70EL3 339 aaPredicted RBP20.11■□□□□ 0.81
TNPO1-210ENST00000515483 PSMD1Q99460 953 aa20.11■□□□□ 0.81
TNPO1-210ENST00000515483 KNSTRNQ9Y448 316 aa20.11■□□□□ 0.81
TNPO1-210ENST00000515483 AOC2O75106 756 aa20.09■□□□□ 0.81
TNPO1-210ENST00000515483 FMR1Q06787 632 aaKnown RBP eCLIP20.09■□□□□ 0.811e-6■■■□□ 15.4
TNPO1-210ENST00000515483 CC2D2BQ6DHV5 1058 aa20.08■□□□□ 0.81
TNPO1-210ENST00000515483 GNAT3A8MTJ3 354 aa20.07■□□□□ 0.8
TNPO1-210ENST00000515483 TRAF5O00463 557 aa20.07■□□□□ 0.8
TNPO1-210ENST00000515483 RGL2O15211 777 aa20.07■□□□□ 0.8
TNPO1-210ENST00000515483 EPS15P42566 896 aa20.07■□□□□ 0.8
TNPO1-210ENST00000515483 SCNN1DP51172 638 aa20.07■□□□□ 0.8
TNPO1-210ENST00000515483 BRPF1P55201 1214 aaPredicted RBP20.07■□□□□ 0.8
TNPO1-210ENST00000515483 DGKZQ13574 1117 aa20.07■□□□□ 0.8
TNPO1-210ENST00000515483 IL17REQ8NFR9 667 aa20.07■□□□□ 0.8
TNPO1-210ENST00000515483 NIP7Q9Y221 180 aaKnown RBP eCLIP20.07■□□□□ 0.8
TNPO1-210ENST00000515483 HHIPL1Q96JK4 782 aa20.06■□□□□ 0.8
TNPO1-210ENST00000515483 PDE4DIPQ5VU43 2346 aa20.05■□□□□ 0.8
TNPO1-210ENST00000515483 DIAPH1O60610 1272 aaKnown RBP20.05■□□□□ 0.8
TNPO1-210ENST00000515483 GTF2E1P29083 439 aaPredicted RBP20.05■□□□□ 0.8
TNPO1-210ENST00000515483 GRIPAP1Q4V328 841 aa20.05■□□□□ 0.8
TNPO1-210ENST00000515483 SAPCD2Q86UD0 394 aa20.05■□□□□ 0.8
TNPO1-210ENST00000515483 GAS2L2Q8NHY3 880 aa20.05■□□□□ 0.8
TNPO1-210ENST00000515483 TIMELESSQ9UNS1 1208 aa20.05■□□□□ 0.8
TNPO1-210ENST00000515483 LARGE2Q8N3Y3 721 aa20.04■□□□□ 0.8
TNPO1-210ENST00000515483 USP16Q9Y5T5 823 aa20.04■□□□□ 0.8
TNPO1-210ENST00000515483 CELF2O95319 508 aaKnown RBP20.03■□□□□ 0.8
TNPO1-210ENST00000515483 FAM177BA6PVY3 158 aa20.02■□□□□ 0.8
TNPO1-210ENST00000515483 BTBD11A6QL63 1104 aa20.02■□□□□ 0.8
TNPO1-210ENST00000515483 PIP4K2AP48426 406 aaPredicted RBP20.02■□□□□ 0.8
TNPO1-210ENST00000515483 ADARB2Q9NS39 739 aaKnown RBP20.02■□□□□ 0.8
TNPO1-210ENST00000515483 BCORQ6W2J9 1755 aa20.01■□□□□ 0.79
TNPO1-210ENST00000515483 LTBP1Q14766 1721 aa20.01■□□□□ 0.79
TNPO1-210ENST00000515483 SNED1Q8TER0 1413 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms