RNA–Protein interactions for RNA: ENST00000515332.5

SGMS2-209, Transcript of sphingomyelin synthase 2, human

TSL 3

Gene SGMS2, Length 498 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGMS2-209	ENST00000515332	CAMTA2	O94983	1202 aa		32.94	■■■□□ 2.86
SGMS2-209	ENST00000515332	MASTL	Q96GX5	879 aa		32.94	■■■□□ 2.86
SGMS2-209	ENST00000515332	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32.94	■■■□□ 2.86
SGMS2-209	ENST00000515332	TMEM88B	A6NKF7	163 aa		32.93	■■■□□ 2.86
SGMS2-209	ENST00000515332	A1BG	P04217	495 aa		32.93	■■■□□ 2.86
SGMS2-209	ENST00000515332	TEF	Q10587	303 aa		32.93	■■■□□ 2.86
SGMS2-209	ENST00000515332	ARFGEF2	Q9Y6D5	1785 aa		32.92	■■■□□ 2.86
SGMS2-209	ENST00000515332	DIAPH1	O60610	1272 aa	Known RBP	32.92	■■■□□ 2.86
SGMS2-209	ENST00000515332	SCN4A	P35499	1836 aa		32.92	■■■□□ 2.86
SGMS2-209	ENST00000515332	CLSPN	Q9HAW4	1339 aa		32.92	■■■□□ 2.86
SGMS2-209	ENST00000515332	ITGBL1	O95965	494 aa	Predicted RBP	32.91	■■■□□ 2.86
SGMS2-209	ENST00000515332	EAPP	Q56P03	285 aa	Predicted RBP	32.91	■■■□□ 2.86
SGMS2-209	ENST00000515332	NPM2	Q86SE8	214 aa	Known RBP	32.91	■■■□□ 2.86
SGMS2-209	ENST00000515332	IL17RE	Q8NFR9	667 aa		32.91	■■■□□ 2.86
SGMS2-209	ENST00000515332	ZNF541	Q9H0D2	1346 aa		32.88	■■■□□ 2.85
SGMS2-209	ENST00000515332	LBX1	P52954	281 aa		32.88	■■■□□ 2.85
SGMS2-209	ENST00000515332	CCDC93	Q567U6	631 aa		32.88	■■■□□ 2.85
SGMS2-209	ENST00000515332	C7orf43	Q8WVR3	580 aa		32.88	■■■□□ 2.85
SGMS2-209	ENST00000515332	WBP1L	Q9NX94	342 aa		32.88	■■■□□ 2.85
SGMS2-209	ENST00000515332	CLEC11A	Q9Y240	323 aa		32.88	■■■□□ 2.85
SGMS2-209	ENST00000515332	DZIP3	Q86Y13	1208 aa	Known RBP	32.87	■■■□□ 2.85
SGMS2-209	ENST00000515332	FMNL2	Q96PY5	1086 aa		32.87	■■■□□ 2.85
SGMS2-209	ENST00000515332	GNAT3	A8MTJ3	354 aa		32.86	■■■□□ 2.85
SGMS2-209	ENST00000515332	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.86	■■■□□ 2.85
SGMS2-209	ENST00000515332	SIPA1L3	O60292	1781 aa	Predicted RBP	32.86	■■■□□ 2.85
SGMS2-209	ENST00000515332	BCOR	Q6W2J9	1755 aa		32.86	■■■□□ 2.85
SGMS2-209	ENST00000515332	HACL1	Q9UJ83	578 aa		32.85	■■■□□ 2.85
SGMS2-209	ENST00000515332	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.84	■■■□□ 2.85
SGMS2-209	ENST00000515332	NBPF5P	Q86XG9	351 aa	Predicted RBP	32.84	■■■□□ 2.85
SGMS2-209	ENST00000515332	CCER1	Q8TC90	406 aa	Predicted RBP	32.84	■■■□□ 2.85
SGMS2-209	ENST00000515332	PIP4K2A	P48426	406 aa	Predicted RBP	32.83	■■■□□ 2.85
SGMS2-209	ENST00000515332	KCNQ3	O43525	872 aa		32.82	■■■□□ 2.84
SGMS2-209	ENST00000515332	EPHX2	P34913	555 aa		32.82	■■■□□ 2.84
SGMS2-209	ENST00000515332	OLFM4	Q6UX06	510 aa		32.82	■■■□□ 2.84
SGMS2-209	ENST00000515332	NPR1	P16066	1061 aa		32.81	■■■□□ 2.84
SGMS2-209	ENST00000515332	GAS2L2	Q8NHY3	880 aa		32.81	■■■□□ 2.84
SGMS2-209	ENST00000515332	ADAMTSL1	Q8N6G6	1762 aa		32.81	■■■□□ 2.84
SGMS2-209	ENST00000515332	DEFB115	Q30KQ5	88 aa		32.8	■■■□□ 2.84
SGMS2-209	ENST00000515332	RASSF10	A6NK89	507 aa		32.79	■■■□□ 2.84
SGMS2-209	ENST00000515332	U2SURP	O15042	1029 aa	Known RBP	32.79	■■■□□ 2.84
SGMS2-209	ENST00000515332	HSPA8	P11142	646 aa	Known RBP	32.79	■■■□□ 2.84
SGMS2-209	ENST00000515332	MAP1S	Q66K74	1059 aa	Predicted RBP	32.79	■■■□□ 2.84
SGMS2-209	ENST00000515332	CNTROB	Q8N137	903 aa		32.79	■■■□□ 2.84
SGMS2-209	ENST00000515332	RNF123	Q5XPI4	1314 aa		32.78	■■■□□ 2.84
SGMS2-209	ENST00000515332	CC2D1B	Q5T0F9	858 aa	Known RBP	32.78	■■■□□ 2.84
SGMS2-209	ENST00000515332	USP16	Q9Y5T5	823 aa		32.78	■■■□□ 2.84
SGMS2-209	ENST00000515332	ABHD8	Q96I13	439 aa		32.77	■■■□□ 2.84
SGMS2-209	ENST00000515332	BTBD11	A6QL63	1104 aa		32.76	■■■□□ 2.83
SGMS2-209	ENST00000515332	CLEC4G	Q6UXB4	293 aa		32.76	■■■□□ 2.83
SGMS2-209	ENST00000515332	PNMA8A	Q86V59	439 aa	Predicted RBP	32.76	■■■□□ 2.83
SGMS2-209	ENST00000515332	KLRG2	A4D1S0	409 aa	Predicted RBP	32.75	■■■□□ 2.83
SGMS2-209	ENST00000515332	SLC34A2	O95436	690 aa		32.75	■■■□□ 2.83
SGMS2-209	ENST00000515332	RTKN2	Q8IZC4	609 aa		32.75	■■■□□ 2.83
SGMS2-209	ENST00000515332	WDR33	Q9C0J8	1336 aa	Known RBP	32.75	■■■□□ 2.83
SGMS2-209	ENST00000515332	COL3A1	P02461	1466 aa	Predicted RBP	32.74	■■■□□ 2.83
SGMS2-209	ENST00000515332	CEMIP	Q8WUJ3	1361 aa		32.74	■■■□□ 2.83
SGMS2-209	ENST00000515332	PRAMEF22	A3QJZ6	481 aa		32.74	■■■□□ 2.83
SGMS2-209	ENST00000515332	IARS	P41252	1262 aa	Known RBP	32.74	■■■□□ 2.83
SGMS2-209	ENST00000515332	ABT1	Q9ULW3	272 aa	Known RBP	32.74	■■■□□ 2.83
SGMS2-209	ENST00000515332	ZNF652	Q9Y2D9	606 aa		32.74	■■■□□ 2.83
SGMS2-209	ENST00000515332	FZD9	O00144	591 aa		32.73	■■■□□ 2.83
SGMS2-209	ENST00000515332	FAM161A	Q3B820	660 aa		32.73	■■■□□ 2.83
SGMS2-209	ENST00000515332	FAM177B	A6PVY3	158 aa		32.72	■■■□□ 2.83
SGMS2-209	ENST00000515332	MAP2K1	Q02750	393 aa	Predicted RBP	32.72	■■■□□ 2.83
SGMS2-209	ENST00000515332	TPTE2	Q6XPS3	522 aa		32.72	■■■□□ 2.83
SGMS2-209	ENST00000515332	SYNE4	Q8N205	404 aa		32.72	■■■□□ 2.83
SGMS2-209	ENST00000515332	NIP7	Q9Y221	180 aa	Known RBP eCLIP	32.71	■■■□□ 2.83
SGMS2-209	ENST00000515332	GPC2	Q8N158	579 aa		32.7	■■■□□ 2.83
SGMS2-209	ENST00000515332	KIF7	Q2M1P5	1343 aa		32.7	■■■□□ 2.82
SGMS2-209	ENST00000515332	PER1	O15534	1290 aa	Predicted RBP	32.69	■■■□□ 2.82
SGMS2-209	ENST00000515332	CNGB1	Q14028	1251 aa	Predicted RBP	32.67	■■■□□ 2.82
SGMS2-209	ENST00000515332	PHACTR3	Q96KR7	559 aa		32.67	■■■□□ 2.82
SGMS2-209	ENST00000515332	DDX21	Q9NR30	783 aa	Known RBP eCLIP	32.67	■■■□□ 2.82
SGMS2-209	ENST00000515332	ALDH1B1	P30837	517 aa		32.66	■■■□□ 2.82
SGMS2-209	ENST00000515332	SNRPA1	P09661	255 aa	Known RBP	32.65	■■■□□ 2.82
SGMS2-209	ENST00000515332	GJA3	Q9Y6H8	435 aa		32.65	■■■□□ 2.82
SGMS2-209	ENST00000515332	NBPF26	B4DH59	902 aa		32.64	■■■□□ 2.82
SGMS2-209	ENST00000515332	FMR1	Q06787	632 aa	Known RBP eCLIP	32.64	■■■□□ 2.82
SGMS2-209	ENST00000515332	NBPF10	Q6P3W6	841 aa	Known RBP	32.64	■■■□□ 2.82
SGMS2-209	ENST00000515332	NBPF15	Q8N660	670 aa		32.64	■■■□□ 2.82
SGMS2-209	ENST00000515332	JDP2	Q8WYK2	163 aa		32.64	■■■□□ 2.82
SGMS2-209	ENST00000515332	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	32.63	■■■□□ 2.81
SGMS2-209	ENST00000515332	SNED1	Q8TER0	1413 aa		32.62	■■■□□ 2.81
SGMS2-209	ENST00000515332	PRKAR2B	P31323	418 aa		32.62	■■■□□ 2.81
SGMS2-209	ENST00000515332	PSMD1	Q99460	953 aa		32.62	■■■□□ 2.81
SGMS2-209	ENST00000515332	GTF2E1	P29083	439 aa	Predicted RBP	32.61	■■■□□ 2.81
SGMS2-209	ENST00000515332	EIF6	P56537	245 aa	Known RBP	32.61	■■■□□ 2.81
SGMS2-209	ENST00000515332	GRM1	Q13255	1194 aa		32.61	■■■□□ 2.81
SGMS2-209	ENST00000515332	HLF	Q16534	295 aa		32.61	■■■□□ 2.81
SGMS2-209	ENST00000515332	CAPNS2	Q96L46	248 aa		32.61	■■■□□ 2.81
SGMS2-209	ENST00000515332	COL4A5	P29400	1685 aa		32.61	■■■□□ 2.81
SGMS2-209	ENST00000515332	LTBP1	Q14766	1721 aa		32.6	■■■□□ 2.81
SGMS2-209	ENST00000515332	CCDC85C	A6NKD9	419 aa		32.6	■■■□□ 2.81
SGMS2-209	ENST00000515332	RGL2	O15211	777 aa		32.59	■■■□□ 2.81
SGMS2-209	ENST00000515332	LMOD1	P29536	600 aa	Predicted RBP	32.59	■■■□□ 2.81
SGMS2-209	ENST00000515332	CYP4F22	Q6NT55	531 aa		32.59	■■■□□ 2.81
SGMS2-209	ENST00000515332	THSD7B	Q9C0I4	1608 aa		32.59	■■■□□ 2.81
SGMS2-209	ENST00000515332	BEGAIN	Q9BUH8	593 aa		32.58	■■■□□ 2.81
SGMS2-209	ENST00000515332	EPS15	P42566	896 aa		32.57	■■■□□ 2.8
SGMS2-209	ENST00000515332	ECE1	P42892	770 aa		32.57	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms