RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 NOL8Q76FK4 1167 aaKnown RBP9.56□□□□□ -0.88
NPHP3-211ENST00000515289 JAZF1Q86VZ6 243 aa9.56□□□□□ -0.88
NPHP3-211ENST00000515289 MICAL1Q8TDZ2 1067 aa9.56□□□□□ -0.88
NPHP3-211ENST00000515289 KCNB2Q92953 911 aa9.56□□□□□ -0.88
NPHP3-211ENST00000515289 A6NJY4 79 aa9.55□□□□□ -0.88
NPHP3-211ENST00000515289 ZPR1O75312 459 aa9.55□□□□□ -0.88
NPHP3-211ENST00000515289 PDGFAP04085 211 aa9.55□□□□□ -0.88
NPHP3-211ENST00000515289 SH3BP2P78314 561 aa9.55□□□□□ -0.88
NPHP3-211ENST00000515289 DNM1Q05193 864 aaKnown RBP9.55□□□□□ -0.88
NPHP3-211ENST00000515289 BRINP2Q9C0B6 783 aa9.55□□□□□ -0.88
NPHP3-211ENST00000515289 DNAJC25Q9H1X3 360 aa9.55□□□□□ -0.88
NPHP3-211ENST00000515289 CHMP3Q9Y3E7 222 aa9.55□□□□□ -0.88
NPHP3-211ENST00000515289 NEFLP07196 543 aa9.54□□□□□ -0.88
NPHP3-211ENST00000515289 HSD3B2P26439 372 aa9.54□□□□□ -0.88
NPHP3-211ENST00000515289 IGBP1P78318 339 aa9.54□□□□□ -0.88
NPHP3-211ENST00000515289 BMS1Q14692 1282 aaKnown RBP9.54□□□□□ -0.88
NPHP3-211ENST00000515289 ESCO1Q5FWF5 840 aa9.54□□□□□ -0.88
NPHP3-211ENST00000515289 TBCELQ5QJ74 424 aa9.54□□□□□ -0.88
NPHP3-211ENST00000515289 EDEM1Q92611 657 aa9.54□□□□□ -0.88
NPHP3-211ENST00000515289 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.54□□□□□ -0.88
NPHP3-211ENST00000515289 SLC6A16Q9GZN6 736 aa9.54□□□□□ -0.88
NPHP3-211ENST00000515289 hCG_2014768A0A024R1R8 64 aa9.53□□□□□ -0.88
NPHP3-211ENST00000515289 EIF1AYO14602 144 aaKnown RBP9.53□□□□□ -0.88
NPHP3-211ENST00000515289 CLSTN1O94985 981 aa9.53□□□□□ -0.88
NPHP3-211ENST00000515289 ATF4P18848 351 aaPredicted RBP9.53□□□□□ -0.88
NPHP3-211ENST00000515289 SMTNP53814 917 aa9.53□□□□□ -0.88
NPHP3-211ENST00000515289 METTL14Q9HCE5 456 aaKnown RBP9.53□□□□□ -0.88
NPHP3-211ENST00000515289 GGT7Q9UJ14 662 aa9.53□□□□□ -0.88
NPHP3-211ENST00000515289 USP31Q70CQ4 1352 aa9.52□□□□□ -0.88
NPHP3-211ENST00000515289 GNRH1P01148 92 aa9.52□□□□□ -0.89
NPHP3-211ENST00000515289 HIRAP54198 1017 aaPredicted RBP9.52□□□□□ -0.89
NPHP3-211ENST00000515289 ORC1Q13415 861 aa9.52□□□□□ -0.89
NPHP3-211ENST00000515289 WRNQ14191 1432 aaPredicted RBP eCLIP9.52□□□□□ -0.89
NPHP3-211ENST00000515289 NBPF6Q5VWK0 638 aa9.52□□□□□ -0.89
NPHP3-211ENST00000515289 VASH1Q7L8A9 365 aaPredicted RBP9.52□□□□□ -0.89
NPHP3-211ENST00000515289 CYP2U1Q7Z449 544 aa9.52□□□□□ -0.89
NPHP3-211ENST00000515289 ETFBKMTQ8IXQ9 262 aa9.52□□□□□ -0.89
NPHP3-211ENST00000515289 MRFAP1L1Q96HT8 127 aa9.52□□□□□ -0.89
NPHP3-211ENST00000515289 NBPF4Q96M43 638 aa9.52□□□□□ -0.89
NPHP3-211ENST00000515289 WBP1LQ9NX94 342 aa9.52□□□□□ -0.89
NPHP3-211ENST00000515289 CFTRP13569 1480 aa9.52□□□□□ -0.89
NPHP3-211ENST00000515289 ARID4BQ4LE39 1312 aaPredicted RBP9.52□□□□□ -0.89
NPHP3-211ENST00000515289 GIPC1O14908 333 aa9.51□□□□□ -0.89
NPHP3-211ENST00000515289 XRCC5P13010 732 aaKnown RBP9.51□□□□□ -0.89
NPHP3-211ENST00000515289 PCSK2P16519 638 aa9.51□□□□□ -0.89
NPHP3-211ENST00000515289 IBSPP21815 317 aaPredicted RBP9.51□□□□□ -0.89
NPHP3-211ENST00000515289 ZAP70P43403 619 aa9.51□□□□□ -0.89
NPHP3-211ENST00000515289 WNT2BQ93097 391 aa9.51□□□□□ -0.89
NPHP3-211ENST00000515289 DMGDHQ9UI17 866 aaKnown RBP9.51□□□□□ -0.89
NPHP3-211ENST00000515289 SYNJ1O43426 1573 aa9.5□□□□□ -0.89
NPHP3-211ENST00000515289 ST13P50502 369 aaKnown RBP9.5□□□□□ -0.89
NPHP3-211ENST00000515289 C11orf91Q3C1V1 193 aa9.5□□□□□ -0.89
NPHP3-211ENST00000515289 CKAP2LQ8IYA6 745 aa9.5□□□□□ -0.89
NPHP3-211ENST00000515289 ZCRB1Q8TBF4 217 aaKnown RBP9.5□□□□□ -0.89
NPHP3-211ENST00000515289 GPRASP2Q96D09 838 aa9.5□□□□□ -0.89
NPHP3-211ENST00000515289 STAC3Q96MF2 364 aa9.5□□□□□ -0.89
NPHP3-211ENST00000515289 C12orf49Q9H741 205 aa9.5□□□□□ -0.89
NPHP3-211ENST00000515289 MRPL42Q9Y6G3 142 aaKnown RBP9.5□□□□□ -0.89
NPHP3-211ENST00000515289 CDK2AP1O14519 115 aa9.49□□□□□ -0.89
NPHP3-211ENST00000515289 OPLAHO14841 1288 aa9.49□□□□□ -0.89
NPHP3-211ENST00000515289 VARSP26640 1264 aaKnown RBP9.49□□□□□ -0.89
NPHP3-211ENST00000515289 DHX9Q08211 1270 aaKnown RBP9.49□□□□□ -0.89
NPHP3-211ENST00000515289 PAK2Q13177 524 aa9.49□□□□□ -0.89
NPHP3-211ENST00000515289 RTN1Q16799 776 aa9.49□□□□□ -0.89
NPHP3-211ENST00000515289 RNF187Q5TA31 235 aaPredicted RBP9.49□□□□□ -0.89
NPHP3-211ENST00000515289 CPNE3O75131 537 aaKnown RBP9.48□□□□□ -0.89
NPHP3-211ENST00000515289 LSM11P83369 360 aaKnown RBP eCLIP9.48□□□□□ -0.89
NPHP3-211ENST00000515289 SERINC3Q13530 473 aa9.48□□□□□ -0.89
NPHP3-211ENST00000515289 TAF1CQ15572 869 aaPredicted RBP9.48□□□□□ -0.89
NPHP3-211ENST00000515289 RASGRP4Q8TDF6 673 aa9.48□□□□□ -0.89
NPHP3-211ENST00000515289 MKL1Q969V6 931 aa9.48□□□□□ -0.89
NPHP3-211ENST00000515289 NOP58Q9Y2X3 529 aaKnown RBP9.48□□□□□ -0.89
NPHP3-211ENST00000515289 FCF1Q9Y324 198 aaKnown RBP9.48□□□□□ -0.89
NPHP3-211ENST00000515289 SERTM1A2A2V5 107 aa9.47□□□□□ -0.89
NPHP3-211ENST00000515289 K7ELQ4 463 aaPredicted RBP9.47□□□□□ -0.89
NPHP3-211ENST00000515289 EML1O00423 815 aa9.47□□□□□ -0.89
NPHP3-211ENST00000515289 ENPP3O14638 875 aa9.47□□□□□ -0.89
NPHP3-211ENST00000515289 RPLP1P05386 114 aaKnown RBP9.47□□□□□ -0.89
NPHP3-211ENST00000515289 DGKZQ13574 1117 aa9.47□□□□□ -0.89
NPHP3-211ENST00000515289 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.47□□□□□ -0.89
NPHP3-211ENST00000515289 ERMP1Q7Z2K6 904 aa9.47□□□□□ -0.89
NPHP3-211ENST00000515289 NBPF15Q8N660 670 aa9.47□□□□□ -0.89
NPHP3-211ENST00000515289 NGLY1Q96IV0 654 aa9.47□□□□□ -0.89
NPHP3-211ENST00000515289 TMPRSS4Q9NRS4 437 aa9.47□□□□□ -0.89
NPHP3-211ENST00000515289 WNT7BP56706 349 aa9.46□□□□□ -0.9
NPHP3-211ENST00000515289 ANAPC15P60006 121 aa9.46□□□□□ -0.9
NPHP3-211ENST00000515289 TEAD4Q15561 434 aa9.46□□□□□ -0.9
NPHP3-211ENST00000515289 ALDH16A1Q8IZ83 802 aa9.46□□□□□ -0.9
NPHP3-211ENST00000515289 FAM9AQ8IZU1 332 aaPredicted RBP9.46□□□□□ -0.9
NPHP3-211ENST00000515289 ZNF784Q8NCA9 323 aaPredicted RBP9.46□□□□□ -0.9
NPHP3-211ENST00000515289 IFT43Q96FT9 208 aa9.46□□□□□ -0.9
NPHP3-211ENST00000515289 EMP3P54852 163 aa9.45□□□□□ -0.9
NPHP3-211ENST00000515289 NUDT16Q96DE0 195 aaKnown RBP9.45□□□□□ -0.9
NPHP3-211ENST00000515289 XAGE2Q96GT9 111 aa9.45□□□□□ -0.9
NPHP3-211ENST00000515289 SEC16BQ96JE7 1060 aa9.45□□□□□ -0.9
NPHP3-211ENST00000515289 OSBPL7Q9BZF2 842 aa9.45□□□□□ -0.9
NPHP3-211ENST00000515289 FAM8A1Q9UBU6 413 aa9.45□□□□□ -0.9
NPHP3-211ENST00000515289 USP3Q9Y6I4 520 aa9.45□□□□□ -0.9
NPHP3-211ENST00000515289 V9GY48 417 aaPredicted RBP9.45□□□□□ -0.9
NPHP3-211ENST00000515289 SOGA1O94964 1423 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms