RNA–Protein interactions for RNA: ENST00000515091.1

SPOCK1-210, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 2

Gene SPOCK1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-210ENST00000515091 BCORQ6W2J9 1755 aa16.69■□□□□ 0.26
SPOCK1-210ENST00000515091 ERVV-1B6SEH8 477 aa16.69■□□□□ 0.26
SPOCK1-210ENST00000515091 RFC4P35249 363 aa16.69■□□□□ 0.26
SPOCK1-210ENST00000515091 FKBP5Q13451 457 aaPredicted RBP16.69■□□□□ 0.26
SPOCK1-210ENST00000515091 KSR2Q6VAB6 950 aa16.69■□□□□ 0.26
SPOCK1-210ENST00000515091 PLBD2Q8NHP8 589 aa16.69■□□□□ 0.26
SPOCK1-210ENST00000515091 BCL2L12Q9HB09 334 aa16.69■□□□□ 0.26
SPOCK1-210ENST00000515091 SRP68Q9UHB9 627 aaKnown RBP16.69■□□□□ 0.26
SPOCK1-210ENST00000515091 PI4KAP2A4QPH2 592 aa16.68■□□□□ 0.26
SPOCK1-210ENST00000515091 RGL2O15211 777 aa16.68■□□□□ 0.26
SPOCK1-210ENST00000515091 DDX58O95786 925 aaKnown RBP16.68■□□□□ 0.26
SPOCK1-210ENST00000515091 HLFQ16534 295 aa16.68■□□□□ 0.26
SPOCK1-210ENST00000515091 KIF6Q6ZMV9 814 aa16.68■□□□□ 0.26
SPOCK1-210ENST00000515091 PI4KAP1Q8N8J0 262 aa16.68■□□□□ 0.26
SPOCK1-210ENST00000515091 ZBTB3Q9H5J0 574 aa16.68■□□□□ 0.26
SPOCK1-210ENST00000515091 SCN7AQ01118 1682 aa16.68■□□□□ 0.26
SPOCK1-210ENST00000515091 CENPBP07199 599 aaPredicted RBP16.67■□□□□ 0.26
SPOCK1-210ENST00000515091 USPL1Q5W0Q7 1092 aa16.67■□□□□ 0.26
SPOCK1-210ENST00000515091 GIGYF2Q6Y7W6 1299 aaKnown RBP16.67■□□□□ 0.26
SPOCK1-210ENST00000515091 FRAT1Q92837 279 aaPredicted RBP16.67■□□□□ 0.26
SPOCK1-210ENST00000515091 ARXQ96QS3 562 aa16.67■□□□□ 0.26
SPOCK1-210ENST00000515091 PDGFDQ9GZP0 370 aaPredicted RBP16.67■□□□□ 0.26
SPOCK1-210ENST00000515091 RNF123Q5XPI4 1314 aa16.67■□□□□ 0.26
SPOCK1-210ENST00000515091 ARFGEF2Q9Y6D5 1785 aa16.66■□□□□ 0.26
SPOCK1-210ENST00000515091 F6X3S4 739 aa16.66■□□□□ 0.26
SPOCK1-210ENST00000515091 IPO8O15397 1037 aaKnown RBP16.66■□□□□ 0.26
SPOCK1-210ENST00000515091 ZPR1O75312 459 aa16.66■□□□□ 0.26
SPOCK1-210ENST00000515091 GYS1P13807 737 aa16.66■□□□□ 0.26
SPOCK1-210ENST00000515091 TRIM27P14373 513 aa16.66■□□□□ 0.26
SPOCK1-210ENST00000515091 R3HDM1Q15032 1099 aaKnown RBP16.66■□□□□ 0.26
SPOCK1-210ENST00000515091 ZKSCAN2Q63HK3 967 aa16.66■□□□□ 0.26
SPOCK1-210ENST00000515091 CLEC4GQ6UXB4 293 aa16.66■□□□□ 0.26
SPOCK1-210ENST00000515091 ATF7IPQ6VMQ6 1270 aa16.66■□□□□ 0.26
SPOCK1-210ENST00000515091 RIC3Q7Z5B4 369 aa16.66■□□□□ 0.26
SPOCK1-210ENST00000515091 TNNQ9UQP3 1299 aa16.66■□□□□ 0.26
SPOCK1-210ENST00000515091 MAP3K2Q9Y2U5 619 aa16.66■□□□□ 0.26
SPOCK1-210ENST00000515091 CASZ1Q86V15 1759 aa16.65■□□□□ 0.26
SPOCK1-210ENST00000515091 PLIN1O60240 522 aa16.65■□□□□ 0.26
SPOCK1-210ENST00000515091 DNAAF4Q8WXU2 420 aa16.65■□□□□ 0.26
SPOCK1-210ENST00000515091 METTL22Q9BUU2 404 aaPredicted RBP16.65■□□□□ 0.26
SPOCK1-210ENST00000515091 API5Q9BZZ5 524 aaKnown RBP16.65■□□□□ 0.26
SPOCK1-210ENST00000515091 NUP98P52948 1817 aa16.65■□□□□ 0.26
SPOCK1-210ENST00000515091 RRP1P56182 461 aaKnown RBP16.64■□□□□ 0.25
SPOCK1-210ENST00000515091 MSH5O43196 834 aa16.63■□□□□ 0.25
SPOCK1-210ENST00000515091 TCIRG1Q13488 830 aa16.63■□□□□ 0.25
SPOCK1-210ENST00000515091 FKBP8Q14318 412 aa16.63■□□□□ 0.25
SPOCK1-210ENST00000515091 ZNF34Q8IZ26 560 aa16.63■□□□□ 0.25
SPOCK1-210ENST00000515091 SLC16A10Q8TF71 515 aa16.63■□□□□ 0.25
SPOCK1-210ENST00000515091 SUPT16HQ9Y5B9 1047 aaKnown RBP16.63■□□□□ 0.25
SPOCK1-210ENST00000515091 ABCC4O15439 1325 aa16.63■□□□□ 0.25
SPOCK1-210ENST00000515091 ATP10DQ9P241 1426 aa16.62■□□□□ 0.25
SPOCK1-210ENST00000515091 IGKV5-2P06315 115 aa16.62■□□□□ 0.25
SPOCK1-210ENST00000515091 BEND3Q5T5X7 828 aa16.62■□□□□ 0.25
SPOCK1-210ENST00000515091 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.62■□□□□ 0.25
SPOCK1-210ENST00000515091 ISCA1Q9BUE6 129 aa16.62■□□□□ 0.25
SPOCK1-210ENST00000515091 ZNF652Q9Y2D9 606 aa16.62■□□□□ 0.25
SPOCK1-210ENST00000515091 ANKRD36CQ5JPF3 1778 aa16.61■□□□□ 0.25
SPOCK1-210ENST00000515091 PXDNLA1KZ92 1463 aa16.61■□□□□ 0.25
SPOCK1-210ENST00000515091 PSDA5PKW4 1024 aaPredicted RBP16.61■□□□□ 0.25
SPOCK1-210ENST00000515091 RLBP1P12271 317 aa16.61■□□□□ 0.25
SPOCK1-210ENST00000515091 TRIM28Q13263 835 aaKnown RBP16.61■□□□□ 0.25
SPOCK1-210ENST00000515091 HSP90AB3PQ58FF7 597 aa16.61■□□□□ 0.25
SPOCK1-210ENST00000515091 TBC1D9BQ66K14 1250 aa16.61■□□□□ 0.25
SPOCK1-210ENST00000515091 CLUAP1Q96AJ1 413 aa16.61■□□□□ 0.25
SPOCK1-210ENST00000515091 MYD88Q99836 296 aa16.61■□□□□ 0.25
SPOCK1-210ENST00000515091 TM4SF1P30408 202 aa16.6■□□□□ 0.25
SPOCK1-210ENST00000515091 SLC4A10Q6U841 1118 aa16.6■□□□□ 0.25
SPOCK1-210ENST00000515091 DZIP1LQ8IYY4 767 aaKnown RBP16.6■□□□□ 0.25
SPOCK1-210ENST00000515091 NLGN1Q8N2Q7 840 aa16.6■□□□□ 0.25
SPOCK1-210ENST00000515091 LINS1Q8NG48 757 aa16.6■□□□□ 0.25
SPOCK1-210ENST00000515091 UBN2Q6ZU65 1347 aa16.6■□□□□ 0.25
SPOCK1-210ENST00000515091 N4BP2Q86UW6 1770 aaPredicted RBP16.59■□□□□ 0.25
SPOCK1-210ENST00000515091 ATP5J2-PTCD1G3V325 749 aa16.59■□□□□ 0.25
SPOCK1-210ENST00000515091 NEXNQ0ZGT2 675 aa16.59■□□□□ 0.25
SPOCK1-210ENST00000515091 PDE3AQ14432 1141 aa16.59■□□□□ 0.25
SPOCK1-210ENST00000515091 NFIXQ14938 502 aa16.59■□□□□ 0.25
SPOCK1-210ENST00000515091 C20orf194Q5TEA3 1177 aa16.59■□□□□ 0.25
SPOCK1-210ENST00000515091 INTS3Q68E01 1043 aaKnown RBP16.59■□□□□ 0.25
SPOCK1-210ENST00000515091 COL24A1Q17RW2 1714 aa16.59■□□□□ 0.25
SPOCK1-210ENST00000515091 NEURL1BA8MQ27 555 aa16.58■□□□□ 0.24
SPOCK1-210ENST00000515091 MS4A1P11836 297 aa16.58■□□□□ 0.24
SPOCK1-210ENST00000515091 GPTP24298 496 aa16.58■□□□□ 0.24
SPOCK1-210ENST00000515091 CWF19L2Q2TBE0 894 aaKnown RBP16.58■□□□□ 0.24
SPOCK1-210ENST00000515091 MSL1Q68DK7 614 aa16.58■□□□□ 0.24
SPOCK1-210ENST00000515091 NLRP10Q86W26 655 aa16.58■□□□□ 0.24
SPOCK1-210ENST00000515091 TMEM57Q8N5G2 664 aa16.58■□□□□ 0.24
SPOCK1-210ENST00000515091 PANK1Q8TE04 598 aa16.58■□□□□ 0.24
SPOCK1-210ENST00000515091 SRCIN1Q9C0H9 1055 aa16.58■□□□□ 0.24
SPOCK1-210ENST00000515091 NIP7Q9Y221 180 aaKnown RBP eCLIP16.58■□□□□ 0.24
SPOCK1-210ENST00000515091 IBTKQ9P2D0 1353 aaPredicted RBP16.58■□□□□ 0.24
SPOCK1-210ENST00000515091 ALDH1L1O75891 902 aa16.57■□□□□ 0.24
SPOCK1-210ENST00000515091 CCT4P50991 539 aaKnown RBP16.57■□□□□ 0.24
SPOCK1-210ENST00000515091 PARP10Q53GL7 1025 aa16.57■□□□□ 0.24
SPOCK1-210ENST00000515091 BICDL1Q6ZP65 573 aa16.57■□□□□ 0.24
SPOCK1-210ENST00000515091 CCDC191Q8NCU4 936 aa16.57■□□□□ 0.24
SPOCK1-210ENST00000515091 SETDB2Q96T68 719 aa16.57■□□□□ 0.24
SPOCK1-210ENST00000515091 DDR1Q08345 913 aa16.56■□□□□ 0.24
SPOCK1-210ENST00000515091 SUSD4Q5VX71 490 aa16.56■□□□□ 0.24
SPOCK1-210ENST00000515091 FTSJ3Q8IY81 847 aaKnown RBP16.56■□□□□ 0.24
SPOCK1-210ENST00000515091 MTFR1LQ9H019 292 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms