RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 HCN4Q9Y3Q4 1203 aa8.18□□□□□ -1.1
RFC1-216ENST00000514572 TIMP2P16035 220 aa8.17□□□□□ -1.1
RFC1-216ENST00000514572 RHBDD1Q8TEB9 315 aa8.17□□□□□ -1.1
RFC1-216ENST00000514572 AGBL1Q96MI9 1066 aa8.17□□□□□ -1.1
RFC1-216ENST00000514572 NIFKQ9BYG3 293 aaKnown RBP8.17□□□□□ -1.1
RFC1-216ENST00000514572 NIF3L1Q9GZT8 377 aa8.17□□□□□ -1.1
RFC1-216ENST00000514572 ZFAND3Q9H8U3 227 aa8.17□□□□□ -1.1
RFC1-216ENST00000514572 CABP1Q9NZU7 370 aa8.17□□□□□ -1.1
RFC1-216ENST00000514572 ZNF232Q9UNY5 417 aa8.17□□□□□ -1.1
RFC1-216ENST00000514572 PARP3Q9Y6F1 533 aa8.17□□□□□ -1.1
RFC1-216ENST00000514572 PNMA6FA0A0J9YX94 578 aa8.16□□□□□ -1.1
RFC1-216ENST00000514572 ZIC2O95409 532 aaPredicted RBP8.16□□□□□ -1.1
RFC1-216ENST00000514572 GPC1P35052 558 aa8.16□□□□□ -1.1
RFC1-216ENST00000514572 FANCCQ00597 558 aa8.16□□□□□ -1.1
RFC1-216ENST00000514572 XPCQ01831 940 aaPredicted RBP8.16□□□□□ -1.1
RFC1-216ENST00000514572 DNM1Q05193 864 aaKnown RBP8.16□□□□□ -1.1
RFC1-216ENST00000514572 NAALADL2Q58DX5 795 aa8.16□□□□□ -1.1
RFC1-216ENST00000514572 ALG1LQ6GMV1 187 aa8.16□□□□□ -1.1
RFC1-216ENST00000514572 ZNF598Q86UK7 904 aaKnown RBP8.16□□□□□ -1.1
RFC1-216ENST00000514572 FBF1Q8TES7 1133 aa8.16□□□□□ -1.1
RFC1-216ENST00000514572 ZSCAN10Q96SZ4 725 aaPredicted RBP8.16□□□□□ -1.1
RFC1-216ENST00000514572 GRIP2Q9C0E4 1043 aa8.16□□□□□ -1.1
RFC1-216ENST00000514572 METTL5Q9NRN9 209 aaKnown RBP8.16□□□□□ -1.1
RFC1-216ENST00000514572 MEN1O00255 615 aa8.15□□□□□ -1.1
RFC1-216ENST00000514572 NRG2O14511 850 aaPredicted RBP8.15□□□□□ -1.1
RFC1-216ENST00000514572 SORBS3O60504 671 aa8.15□□□□□ -1.1
RFC1-216ENST00000514572 ERCC5P28715 1186 aaPredicted RBP8.15□□□□□ -1.1
RFC1-216ENST00000514572 TXLNAP40222 546 aa8.15□□□□□ -1.1
RFC1-216ENST00000514572 ATP2B2Q01814 1243 aa8.15□□□□□ -1.1
RFC1-216ENST00000514572 ZNF697Q5TEC3 545 aa8.15□□□□□ -1.1
RFC1-216ENST00000514572 TREML1Q86YW5 311 aa8.15□□□□□ -1.1
RFC1-216ENST00000514572 MEIOBQ8N635 442 aa8.15□□□□□ -1.1
RFC1-216ENST00000514572 SNIP1Q8TAD8 396 aaKnown RBP8.15□□□□□ -1.1
RFC1-216ENST00000514572 DRC1Q96MC2 740 aa8.15□□□□□ -1.1
RFC1-216ENST00000514572 WASF2Q9Y6W5 498 aa8.15□□□□□ -1.1
RFC1-216ENST00000514572 LCE2BO14633 110 aa8.14□□□□□ -1.11
RFC1-216ENST00000514572 GNA15P30679 374 aa8.14□□□□□ -1.11
RFC1-216ENST00000514572 ITGAEP38570 1179 aa8.14□□□□□ -1.11
RFC1-216ENST00000514572 NLRP3Q96P20 1036 aa8.14□□□□□ -1.11
RFC1-216ENST00000514572 CSRNP1Q96S65 589 aa8.14□□□□□ -1.11
RFC1-216ENST00000514572 DMGDHQ9UI17 866 aaKnown RBP8.14□□□□□ -1.11
RFC1-216ENST00000514572 PDZRN3Q9UPQ7 1066 aa8.14□□□□□ -1.11
RFC1-216ENST00000514572 TGFBR3LH3BV60 316 aa8.13□□□□□ -1.11
RFC1-216ENST00000514572 WDR4P57081 412 aaKnown RBP8.13□□□□□ -1.11
RFC1-216ENST00000514572 RELBQ01201 579 aa8.13□□□□□ -1.11
RFC1-216ENST00000514572 PSMD2Q13200 908 aa8.13□□□□□ -1.11
RFC1-216ENST00000514572 IER5Q5VY09 327 aa8.13□□□□□ -1.11
RFC1-216ENST00000514572 PIK3R5Q8WYR1 880 aa8.13□□□□□ -1.11
RFC1-216ENST00000514572 NUDT16Q96DE0 195 aaKnown RBP8.13□□□□□ -1.11
RFC1-216ENST00000514572 GGNBP2Q9H3C7 697 aa8.13□□□□□ -1.11
RFC1-216ENST00000514572 ZDHHC3Q9NYG2 299 aa8.13□□□□□ -1.11
RFC1-216ENST00000514572 GPC6Q9Y625 555 aaPredicted RBP8.13□□□□□ -1.11
RFC1-216ENST00000514572 J3QL48 77 aa8.12□□□□□ -1.11
RFC1-216ENST00000514572 RNF144AP50876 292 aaPredicted RBP8.12□□□□□ -1.11
RFC1-216ENST00000514572 ORC1Q13415 861 aa8.12□□□□□ -1.11
RFC1-216ENST00000514572 C4orf17Q53FE4 359 aa8.12□□□□□ -1.11
RFC1-216ENST00000514572 TMEM87AQ8NBN3 555 aa8.12□□□□□ -1.11
RFC1-216ENST00000514572 KLRG1Q96E93 195 aa8.12□□□□□ -1.11
RFC1-216ENST00000514572 DNAJC25Q9H1X3 360 aa8.12□□□□□ -1.11
RFC1-216ENST00000514572 MRS2Q9HD23 443 aa8.12□□□□□ -1.11
RFC1-216ENST00000514572 SPATA31C2B4DYI2 1134 aa8.11□□□□□ -1.11
RFC1-216ENST00000514572 EIF1AYO14602 144 aaKnown RBP8.11□□□□□ -1.11
RFC1-216ENST00000514572 OPLAHO14841 1288 aa8.11□□□□□ -1.11
RFC1-216ENST00000514572 GDF9O60383 454 aa8.11□□□□□ -1.11
RFC1-216ENST00000514572 CTSHP09668 335 aa8.11□□□□□ -1.11
RFC1-216ENST00000514572 C9orf131Q5VYM1 1079 aa8.11□□□□□ -1.11
RFC1-216ENST00000514572 TMEM214Q6NUQ4 689 aaKnown RBP8.11□□□□□ -1.11
RFC1-216ENST00000514572 NT5DC4Q86YG4 428 aa8.11□□□□□ -1.11
RFC1-216ENST00000514572 GPR152Q8TDT2 470 aa8.11□□□□□ -1.11
RFC1-216ENST00000514572 CRELD1Q96HD1 420 aa8.11□□□□□ -1.11
RFC1-216ENST00000514572 TINF2Q9BSI4 451 aa8.11□□□□□ -1.11
RFC1-216ENST00000514572 ZNF395Q9H8N7 513 aaPredicted RBP8.11□□□□□ -1.11
RFC1-216ENST00000514572 TOR4AQ9NXH8 423 aa8.11□□□□□ -1.11
RFC1-216ENST00000514572 VTI1BQ9UEU0 232 aa8.11□□□□□ -1.11
RFC1-216ENST00000514572 SF3A1Q15459 793 aaKnown RBP8.1□□□□□ -1.11
RFC1-216ENST00000514572 TRIM67Q6ZTA4 783 aa8.1□□□□□ -1.11
RFC1-216ENST00000514572 FRMD6Q96NE9 622 aa8.1□□□□□ -1.11
RFC1-216ENST00000514572 SPINT1O43278 529 aa8.09□□□□□ -1.11
RFC1-216ENST00000514572 MICAL2O94851 1124 aa8.09□□□□□ -1.11
RFC1-216ENST00000514572 RPLP1P05386 114 aaKnown RBP8.09□□□□□ -1.11
RFC1-216ENST00000514572 SMPD1P17405 629 aa8.09□□□□□ -1.11
RFC1-216ENST00000514572 ATP4AP20648 1035 aa8.09□□□□□ -1.11
RFC1-216ENST00000514572 PLA2G4AP47712 749 aa8.09□□□□□ -1.11
RFC1-216ENST00000514572 FOXC1Q12948 553 aa8.09□□□□□ -1.11
RFC1-216ENST00000514572 HIF1AQ16665 826 aa8.09□□□□□ -1.11
RFC1-216ENST00000514572 GNASQ5JWF2 1037 aa8.09□□□□□ -1.11
RFC1-216ENST00000514572 UBXN4Q92575 508 aa8.09□□□□□ -1.11
RFC1-216ENST00000514572 TGIF2Q9GZN2 237 aa8.09□□□□□ -1.11
RFC1-216ENST00000514572 FAM13BQ9NYF5 915 aa8.09□□□□□ -1.11
RFC1-216ENST00000514572 AK5Q9Y6K8 562 aa8.09□□□□□ -1.11
RFC1-216ENST00000514572 A6NHS1 94 aa8.08□□□□□ -1.12
RFC1-216ENST00000514572 PCSK2P16519 638 aa8.08□□□□□ -1.12
RFC1-216ENST00000514572 ZNF76P36508 570 aa8.08□□□□□ -1.12
RFC1-216ENST00000514572 XKR5Q6UX68 686 aa8.08□□□□□ -1.12
RFC1-216ENST00000514572 RHPN1Q8TCX5 695 aa8.08□□□□□ -1.12
RFC1-216ENST00000514572 RNF34Q969K3 372 aa8.08□□□□□ -1.12
RFC1-216ENST00000514572 SUSD3Q96L08 255 aa8.08□□□□□ -1.12
RFC1-216ENST00000514572 INPP5BP32019 993 aa8.07□□□□□ -1.12
RFC1-216ENST00000514572 ZNF280CQ8ND82 737 aa8.07□□□□□ -1.12
RFC1-216ENST00000514572 INSM2Q96T92 566 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms