RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 TAF1DQ9H5J8 278 aaPredicted RBP13.8□□□□□ -0.2
DDR1-276ENST00000514534 TBC1D2BQ9UPU7 963 aa13.8□□□□□ -0.2
DDR1-276ENST00000514534 BCORQ6W2J9 1755 aa13.8□□□□□ -0.2
DDR1-276ENST00000514534 SRGNP10124 158 aa13.79□□□□□ -0.2
DDR1-276ENST00000514534 VEGFBP49765 207 aa13.79□□□□□ -0.2
DDR1-276ENST00000514534 TEFQ10587 303 aa13.79□□□□□ -0.2
DDR1-276ENST00000514534 CCDC93Q567U6 631 aa13.79□□□□□ -0.2
DDR1-276ENST00000514534 ZNF790Q6PG37 636 aa13.79□□□□□ -0.2
DDR1-276ENST00000514534 SIPA1L3O60292 1781 aaPredicted RBP13.78□□□□□ -0.2
DDR1-276ENST00000514534 DIAPH1O60610 1272 aaKnown RBP13.78□□□□□ -0.2
DDR1-276ENST00000514534 HSPA5P11021 654 aaKnown RBP13.78□□□□□ -0.2
DDR1-276ENST00000514534 ZNF496Q96IT1 587 aaPredicted RBP13.78□□□□□ -0.2
DDR1-276ENST00000514534 EAPPQ56P03 285 aaPredicted RBP13.77□□□□□ -0.21
DDR1-276ENST00000514534 PNMA8AQ86V59 439 aaPredicted RBP13.77□□□□□ -0.21
DDR1-276ENST00000514534 FMNL2Q96PY5 1086 aa13.77□□□□□ -0.21
DDR1-276ENST00000514534 CLSPNQ9HAW4 1339 aa13.77□□□□□ -0.21
DDR1-276ENST00000514534 WBP1LQ9NX94 342 aa13.77□□□□□ -0.21
DDR1-276ENST00000514534 HACL1Q9UJ83 578 aa13.77□□□□□ -0.21
DDR1-276ENST00000514534 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
DDR1-276ENST00000514534 ADAMTSL1Q8N6G6 1762 aa13.76□□□□□ -0.21
DDR1-276ENST00000514534 CAMTA2O94983 1202 aa13.76□□□□□ -0.21
DDR1-276ENST00000514534 ITGBL1O95965 494 aaPredicted RBP13.76□□□□□ -0.21
DDR1-276ENST00000514534 LBX1P52954 281 aa13.76□□□□□ -0.21
DDR1-276ENST00000514534 FKBP4Q02790 459 aaKnown RBP eCLIP13.76□□□□□ -0.21
DDR1-276ENST00000514534 GAS2L2Q8NHY3 880 aa13.76□□□□□ -0.21
DDR1-276ENST00000514534 RASSF10A6NK89 507 aa13.75□□□□□ -0.21
DDR1-276ENST00000514534 GNAT3A8MTJ3 354 aa13.75□□□□□ -0.21
DDR1-276ENST00000514534 SLC34A2O95436 690 aa13.75□□□□□ -0.21
DDR1-276ENST00000514534 NPR1P16066 1061 aa13.75□□□□□ -0.21
DDR1-276ENST00000514534 EPHX2P34913 555 aa13.75□□□□□ -0.21
DDR1-276ENST00000514534 MAP2K1Q02750 393 aaPredicted RBP13.75□□□□□ -0.21
DDR1-276ENST00000514534 DEFB115Q30KQ5 88 aa13.75□□□□□ -0.21
DDR1-276ENST00000514534 AMER1Q5JTC6 1135 aaPredicted RBP13.75□□□□□ -0.21
DDR1-276ENST00000514534 DZIP3Q86Y13 1208 aaKnown RBP13.75□□□□□ -0.21
DDR1-276ENST00000514534 ZNF652Q9Y2D9 606 aa13.75□□□□□ -0.21
DDR1-276ENST00000514534 A1BGP04217 495 aa13.74□□□□□ -0.21
DDR1-276ENST00000514534 CLEC4GQ6UXB4 293 aa13.74□□□□□ -0.21
DDR1-276ENST00000514534 NBPF5PQ86XG9 351 aaPredicted RBP13.74□□□□□ -0.21
DDR1-276ENST00000514534 RTKN2Q8IZC4 609 aa13.74□□□□□ -0.21
DDR1-276ENST00000514534 C7orf43Q8WVR3 580 aa13.74□□□□□ -0.21
DDR1-276ENST00000514534 HSPA8P11142 646 aaKnown RBP13.73□□□□□ -0.21
DDR1-276ENST00000514534 TRIM26Q12899 539 aaPredicted RBP13.73□□□□□ -0.21
DDR1-276ENST00000514534 CNTROBQ8N137 903 aa13.73□□□□□ -0.21
DDR1-276ENST00000514534 IL17REQ8NFR9 667 aa13.73□□□□□ -0.21
DDR1-276ENST00000514534 ABHD8Q96I13 439 aa13.73□□□□□ -0.21
DDR1-276ENST00000514534 WDR33Q9C0J8 1336 aaKnown RBP13.72□□□□□ -0.21
DDR1-276ENST00000514534 ZNF541Q9H0D2 1346 aa13.72□□□□□ -0.21
DDR1-276ENST00000514534 ALDH1B1P30837 517 aa13.72□□□□□ -0.21
DDR1-276ENST00000514534 TPTE2Q6XPS3 522 aa13.72□□□□□ -0.21
DDR1-276ENST00000514534 ZNF277Q9NRM2 450 aaPredicted RBP13.72□□□□□ -0.21
DDR1-276ENST00000514534 RNF123Q5XPI4 1314 aa13.71□□□□□ -0.21
DDR1-276ENST00000514534 KLRG2A4D1S0 409 aaPredicted RBP13.71□□□□□ -0.21
DDR1-276ENST00000514534 RGL2O15211 777 aa13.71□□□□□ -0.21
DDR1-276ENST00000514534 IARSP41252 1262 aaKnown RBP13.71□□□□□ -0.21
DDR1-276ENST00000514534 GPC2Q8N158 579 aa13.71□□□□□ -0.21
DDR1-276ENST00000514534 BEGAINQ9BUH8 593 aa13.71□□□□□ -0.21
DDR1-276ENST00000514534 ABT1Q9ULW3 272 aaKnown RBP13.71□□□□□ -0.21
DDR1-276ENST00000514534 BTBD11A6QL63 1104 aa13.7□□□□□ -0.22
DDR1-276ENST00000514534 FZD9O00144 591 aa13.7□□□□□ -0.22
DDR1-276ENST00000514534 U2SURPO15042 1029 aaKnown RBP13.7□□□□□ -0.22
DDR1-276ENST00000514534 FAM161AQ3B820 660 aa13.7□□□□□ -0.22
DDR1-276ENST00000514534 MAP1SQ66K74 1059 aaPredicted RBP13.7□□□□□ -0.22
DDR1-276ENST00000514534 JDP2Q8WYK2 163 aa13.7□□□□□ -0.22
DDR1-276ENST00000514534 CEMIPQ8WUJ3 1361 aa13.7□□□□□ -0.22
DDR1-276ENST00000514534 TRPM7Q96QT4 1865 aa13.7□□□□□ -0.22
DDR1-276ENST00000514534 THSD7BQ9C0I4 1608 aa13.69□□□□□ -0.22
DDR1-276ENST00000514534 LMOD1P29536 600 aaPredicted RBP13.69□□□□□ -0.22
DDR1-276ENST00000514534 ECE1P42892 770 aa13.69□□□□□ -0.22
DDR1-276ENST00000514534 SYNE4Q8N205 404 aa13.69□□□□□ -0.22
DDR1-276ENST00000514534 NIP7Q9Y221 180 aaKnown RBP eCLIP13.69□□□□□ -0.22
DDR1-276ENST00000514534 EIF6P56537 245 aaKnown RBP13.68□□□□□ -0.22
DDR1-276ENST00000514534 CNKSR2Q8WXI2 1034 aa13.68□□□□□ -0.22
DDR1-276ENST00000514534 DDX21Q9NR30 783 aaKnown RBP eCLIP13.68□□□□□ -0.22
DDR1-276ENST00000514534 USP16Q9Y5T5 823 aa13.68□□□□□ -0.22
DDR1-276ENST00000514534 COL3A1P02461 1466 aaPredicted RBP13.67□□□□□ -0.22
DDR1-276ENST00000514534 SNRPA1P09661 255 aaKnown RBP13.67□□□□□ -0.22
DDR1-276ENST00000514534 GTF2E1P29083 439 aaPredicted RBP13.67□□□□□ -0.22
DDR1-276ENST00000514534 MLLT1Q03111 559 aaPredicted RBP13.67□□□□□ -0.22
DDR1-276ENST00000514534 CC2D1BQ5T0F9 858 aaKnown RBP13.67□□□□□ -0.22
DDR1-276ENST00000514534 CC2D2BQ6DHV5 1058 aa13.67□□□□□ -0.22
DDR1-276ENST00000514534 PAXIP1Q6ZW49 1069 aaPredicted RBP13.67□□□□□ -0.22
DDR1-276ENST00000514534 PSMD1Q99460 953 aa13.67□□□□□ -0.22
DDR1-276ENST00000514534 KCNQ3O43525 872 aa13.66□□□□□ -0.22
DDR1-276ENST00000514534 PIP4K2AP48426 406 aaPredicted RBP13.66□□□□□ -0.22
DDR1-276ENST00000514534 GRIPAP1Q4V328 841 aa13.66□□□□□ -0.22
DDR1-276ENST00000514534 CAPNS2Q96L46 248 aa13.66□□□□□ -0.22
DDR1-276ENST00000514534 GJA3Q9Y6H8 435 aa13.66□□□□□ -0.22
DDR1-276ENST00000514534 CCDC85CA6NKD9 419 aa13.65□□□□□ -0.22
DDR1-276ENST00000514534 FAM177BA6PVY3 158 aa13.65□□□□□ -0.22
DDR1-276ENST00000514534 RGS19P49795 217 aa13.65□□□□□ -0.22
DDR1-276ENST00000514534 OLFM4Q6UX06 510 aa13.65□□□□□ -0.22
DDR1-276ENST00000514534 NYXQ9GZU5 481 aa13.65□□□□□ -0.22
DDR1-276ENST00000514534 PER1O15534 1290 aaPredicted RBP13.64□□□□□ -0.23
DDR1-276ENST00000514534 RTF1Q92541 710 aaKnown RBP13.64□□□□□ -0.23
DDR1-276ENST00000514534 GPR101Q96P66 508 aaPredicted RBP13.64□□□□□ -0.23
DDR1-276ENST00000514534 LTBP1Q14766 1721 aa13.64□□□□□ -0.23
DDR1-276ENST00000514534 SNED1Q8TER0 1413 aa13.64□□□□□ -0.23
DDR1-276ENST00000514534 NUP98P52948 1817 aa13.63□□□□□ -0.23
DDR1-276ENST00000514534 PRAMEF22A3QJZ6 481 aa13.63□□□□□ -0.23
DDR1-276ENST00000514534 USP50Q70EL3 339 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms