RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 CRTC2Q53ET0 693 aaPredicted RBP6.73□□□□□ -1.33
PROM1-216ENST00000513946 BICDL1Q6ZP65 573 aa6.73□□□□□ -1.33
PROM1-216ENST00000513946 SLCO4C1Q6ZQN7 724 aa6.73□□□□□ -1.33
PROM1-216ENST00000513946 STAG2Q8N3U4 1231 aa6.73□□□□□ -1.33
PROM1-216ENST00000513946 ZNF594Q96JF6 807 aaPredicted RBP6.73□□□□□ -1.33
PROM1-216ENST00000513946 GPC6Q9Y625 555 aaPredicted RBP6.73□□□□□ -1.33
PROM1-216ENST00000513946 NEURL1BA8MQ27 555 aa6.72□□□□□ -1.33
PROM1-216ENST00000513946 PHF20L1A8MW92 1017 aa6.72□□□□□ -1.33
PROM1-216ENST00000513946 LAMC2Q13753 1193 aa6.72□□□□□ -1.33
PROM1-216ENST00000513946 GRIN2CQ14957 1233 aa6.72□□□□□ -1.33
PROM1-216ENST00000513946 LRRC69Q6ZNQ3 347 aa6.72□□□□□ -1.33
PROM1-216ENST00000513946 DCAF5Q96JK2 942 aa6.72□□□□□ -1.33
PROM1-216ENST00000513946 MDFIQ99750 246 aa6.72□□□□□ -1.33
PROM1-216ENST00000513946 C2orf49Q9BVC5 232 aaPredicted RBP6.72□□□□□ -1.33
PROM1-216ENST00000513946 AVENQ9NQS1 362 aaPredicted RBP6.72□□□□□ -1.33
PROM1-216ENST00000513946 MARK1Q9P0L2 795 aa6.72□□□□□ -1.33
PROM1-216ENST00000513946 ZNF777Q9ULD5 760 aaPredicted RBP6.72□□□□□ -1.33
PROM1-216ENST00000513946 SEC13P55735 322 aa6.71□□□□□ -1.34
PROM1-216ENST00000513946 SFSWAPQ12872 951 aaKnown RBP6.71□□□□□ -1.34
PROM1-216ENST00000513946 CFAP70Q5T0N1 1121 aa6.71□□□□□ -1.34
PROM1-216ENST00000513946 FCHSD1Q86WN1 690 aa6.71□□□□□ -1.34
PROM1-216ENST00000513946 GAS2L2Q8NHY3 880 aa6.71□□□□□ -1.34
PROM1-216ENST00000513946 ARXQ96QS3 562 aa6.71□□□□□ -1.34
PROM1-216ENST00000513946 ZNF232Q9UNY5 417 aa6.71□□□□□ -1.34
PROM1-216ENST00000513946 COL8A1P27658 744 aa6.7□□□□□ -1.34
PROM1-216ENST00000513946 LMOD1P29536 600 aaPredicted RBP6.7□□□□□ -1.34
PROM1-216ENST00000513946 DPYDQ12882 1025 aa6.7□□□□□ -1.34
PROM1-216ENST00000513946 ZNF280CQ8ND82 737 aa6.7□□□□□ -1.34
PROM1-216ENST00000513946 PHACTR1Q9C0D0 580 aa6.7□□□□□ -1.34
PROM1-216ENST00000513946 GJA3Q9Y6H8 435 aa6.7□□□□□ -1.34
PROM1-216ENST00000513946 FAM196BA6NMK8 535 aa6.69□□□□□ -1.34
PROM1-216ENST00000513946 PLA2G4EQ3MJ16 856 aa6.69□□□□□ -1.34
PROM1-216ENST00000513946 SCG3Q8WXD2 468 aaKnown RBP6.69□□□□□ -1.34
PROM1-216ENST00000513946 VRTNQ9H8Y1 702 aa6.69□□□□□ -1.34
PROM1-216ENST00000513946 PPP1R12BO60237 982 aaPredicted RBP6.68□□□□□ -1.34
PROM1-216ENST00000513946 ADH6P28332 368 aa6.68□□□□□ -1.34
PROM1-216ENST00000513946 PCBP4P57723 403 aaKnown RBP6.68□□□□□ -1.34
PROM1-216ENST00000513946 SUZ12Q15022 739 aaKnown RBP6.68□□□□□ -1.34
PROM1-216ENST00000513946 ZNF468Q5VIY5 522 aaPredicted RBP6.68□□□□□ -1.34
PROM1-216ENST00000513946 LARP1Q6PKG0 1096 aaKnown RBP6.68□□□□□ -1.34
PROM1-216ENST00000513946 ANKMY2Q8IV38 441 aa6.68□□□□□ -1.34
PROM1-216ENST00000513946 ALDH16A1Q8IZ83 802 aa6.68□□□□□ -1.34
PROM1-216ENST00000513946 RHPN1Q8TCX5 695 aa6.68□□□□□ -1.34
PROM1-216ENST00000513946 HSH2DQ96JZ2 352 aa6.68□□□□□ -1.34
PROM1-216ENST00000513946 SUSD3Q96L08 255 aa6.68□□□□□ -1.34
PROM1-216ENST00000513946 SLC30A3Q99726 388 aa6.68□□□□□ -1.34
PROM1-216ENST00000513946 SUV39H2Q9H5I1 410 aa6.68□□□□□ -1.34
PROM1-216ENST00000513946 MKL2Q9ULH7 1088 aa6.68□□□□□ -1.34
PROM1-216ENST00000513946 KRBA1A5PL33 1030 aa6.67□□□□□ -1.34
PROM1-216ENST00000513946 USP17L15C9J2P7 530 aa6.67□□□□□ -1.34
PROM1-216ENST00000513946 USP17L10C9JJH3 530 aa6.67□□□□□ -1.34
PROM1-216ENST00000513946 USP17L13C9JLJ4 530 aa6.67□□□□□ -1.34
PROM1-216ENST00000513946 USP17L12C9JPN9 530 aa6.67□□□□□ -1.34
PROM1-216ENST00000513946 USP17L11C9JVI0 530 aa6.67□□□□□ -1.34
PROM1-216ENST00000513946 USP17L21D6R901 530 aa6.67□□□□□ -1.34
PROM1-216ENST00000513946 USP17L18D6R9N7 530 aa6.67□□□□□ -1.34
PROM1-216ENST00000513946 USP17L22D6RA61 530 aa6.67□□□□□ -1.34
PROM1-216ENST00000513946 USP17L17D6RBQ6 530 aa6.67□□□□□ -1.34
PROM1-216ENST00000513946 USP17L19D6RCP7 530 aa6.67□□□□□ -1.34
PROM1-216ENST00000513946 USP17L20D6RJB6 530 aa6.67□□□□□ -1.34
PROM1-216ENST00000513946 LGR5O75473 907 aa6.67□□□□□ -1.34
PROM1-216ENST00000513946 DGKGP49619 791 aa6.67□□□□□ -1.34
PROM1-216ENST00000513946 KCNQ4P56696 695 aa6.67□□□□□ -1.34
PROM1-216ENST00000513946 SRPK2P78362 688 aaKnown RBP6.67□□□□□ -1.34
PROM1-216ENST00000513946 USP17L24Q0WX57 530 aa6.67□□□□□ -1.34
PROM1-216ENST00000513946 PODNQ7Z5L7 613 aa6.67□□□□□ -1.34
PROM1-216ENST00000513946 IGHA1P01876 353 aa6.66□□□□□ -1.34
PROM1-216ENST00000513946 CHSY3Q70JA7 882 aa6.66□□□□□ -1.34
PROM1-216ENST00000513946 SYT9Q86SS6 491 aa6.66□□□□□ -1.34
PROM1-216ENST00000513946 NEUROD4Q9HD90 331 aa6.66□□□□□ -1.34
PROM1-216ENST00000513946 DMGDHQ9UI17 866 aaKnown RBP6.66□□□□□ -1.34
PROM1-216ENST00000513946 RBM19Q9Y4C8 960 aaKnown RBP6.66□□□□□ -1.34
PROM1-216ENST00000513946 IGFBP4P22692 258 aa6.65□□□□□ -1.34
PROM1-216ENST00000513946 TYRO3Q06418 890 aa6.65□□□□□ -1.34
PROM1-216ENST00000513946 GPAT2Q6NUI2 795 aa6.65□□□□□ -1.34
PROM1-216ENST00000513946 HINFPQ9BQA5 517 aa6.65□□□□□ -1.34
PROM1-216ENST00000513946 RRAGCQ9HB90 399 aa6.65□□□□□ -1.34
PROM1-216ENST00000513946 ANKIB1Q9P2G1 1089 aa6.65□□□□□ -1.34
PROM1-216ENST00000513946 PRR12Q9ULL5 1215 aa6.65□□□□□ -1.34
PROM1-216ENST00000513946 BCS1LQ9Y276 419 aa6.65□□□□□ -1.34
PROM1-216ENST00000513946 ADARB2-AS1A8MUL3 147 aa6.64□□□□□ -1.35
PROM1-216ENST00000513946 SIN3BO75182 1162 aa6.64□□□□□ -1.35
PROM1-216ENST00000513946 WEE1P30291 646 aa6.64□□□□□ -1.35
PROM1-216ENST00000513946 COL9A3Q14050 684 aaPredicted RBP6.64□□□□□ -1.35
PROM1-216ENST00000513946 CDCA8Q53HL2 280 aa6.64□□□□□ -1.35
PROM1-216ENST00000513946 CHMP7Q8WUX9 453 aaPredicted RBP6.64□□□□□ -1.35
PROM1-216ENST00000513946 TNFRSF25Q93038 417 aa6.64□□□□□ -1.35
PROM1-216ENST00000513946 BRD7Q9NPI1 651 aa6.64□□□□□ -1.35
PROM1-216ENST00000513946 CHMP3Q9Y3E7 222 aa6.64□□□□□ -1.35
PROM1-216ENST00000513946 ELOA3CA0A087WX78 387 aaPredicted RBP6.63□□□□□ -1.35
PROM1-216ENST00000513946 ELOA3DA6NLF2 546 aaPredicted RBP6.63□□□□□ -1.35
PROM1-216ENST00000513946 PROCP04070 461 aa6.63□□□□□ -1.35
PROM1-216ENST00000513946 AMPD1P23109 780 aa6.63□□□□□ -1.35
PROM1-216ENST00000513946 ELOA3BQ3SY89 546 aa6.63□□□□□ -1.35
PROM1-216ENST00000513946 ELOA3Q8NG57 546 aa6.63□□□□□ -1.35
PROM1-216ENST00000513946 CEP63Q96MT8 703 aa6.63□□□□□ -1.35
PROM1-216ENST00000513946 KCNH4Q9UQ05 1017 aa6.63□□□□□ -1.35
PROM1-216ENST00000513946 STARD13Q9Y3M8 1113 aa6.63□□□□□ -1.35
PROM1-216ENST00000513946 GNB5O14775 395 aa6.62□□□□□ -1.35
PROM1-216ENST00000513946 GRNP28799 593 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms