RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 GSPT1P15170 499 aaKnown RBP9.06□□□□□ -0.96
CLCN3-209ENST00000513761 MYRIPQ8NFW9 859 aa9.06□□□□□ -0.96
CLCN3-209ENST00000513761 GTPBP4Q9BZE4 634 aaKnown RBP9.06□□□□□ -0.96
CLCN3-209ENST00000513761 RBM8AQ9Y5S9 174 aaKnown RBP9.06□□□□□ -0.96
CLCN3-209ENST00000513761 GSDMDP57764 484 aa9.05□□□□□ -0.96
CLCN3-209ENST00000513761 ATP8B2P98198 1209 aa9.05□□□□□ -0.96
CLCN3-209ENST00000513761 ARHGAP29Q52LW3 1261 aa9.05□□□□□ -0.96
CLCN3-209ENST00000513761 RAB11FIP4Q86YS3 637 aa9.05□□□□□ -0.96
CLCN3-209ENST00000513761 NUP133Q8WUM0 1156 aa9.05□□□□□ -0.96
CLCN3-209ENST00000513761 DACH1Q9UI36 760 aa9.05□□□□□ -0.96
CLCN3-209ENST00000513761 A0A1W2PP64 1363 aa9.05□□□□□ -0.96
CLCN3-209ENST00000513761 MSH6P52701 1360 aa9.05□□□□□ -0.96
CLCN3-209ENST00000513761 ZSCAN12O43309 604 aa9.05□□□□□ -0.96
CLCN3-209ENST00000513761 KLHL10Q6JEL2 608 aa9.05□□□□□ -0.96
CLCN3-209ENST00000513761 PIBF1Q8WXW3 757 aa9.05□□□□□ -0.96
CLCN3-209ENST00000513761 TSPYL1Q9H0U9 437 aa9.05□□□□□ -0.96
CLCN3-209ENST00000513761 KDM5BQ9UGL1 1544 aa9.05□□□□□ -0.96
CLCN3-209ENST00000513761 SLC3A2P08195 630 aaKnown RBP9.05□□□□□ -0.96
CLCN3-209ENST00000513761 BMS1Q14692 1282 aaKnown RBP9.05□□□□□ -0.96
CLCN3-209ENST00000513761 GPT2Q8TD30 523 aa9.05□□□□□ -0.96
CLCN3-209ENST00000513761 ADGRL2O95490 1459 aa9.05□□□□□ -0.96
CLCN3-209ENST00000513761 MPRIPQ6WCQ1 1025 aa9.05□□□□□ -0.96
CLCN3-209ENST00000513761 FAM173BQ6P4H8 233 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 CPLX3Q8WVH0 158 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 TRIM34Q9BYJ4 488 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 U3KPZ7 1027 aaPredicted RBP9.04□□□□□ -0.96
CLCN3-209ENST00000513761 KIAA0556O60303 1618 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 CCDC171Q6TFL3 1326 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 TRIM22Q8IYM9 498 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 BRF1Q92994 677 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 NEK1Q96PY6 1258 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 SHANK2Q9UPX8 1470 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 EPB41L2O43491 1005 aaKnown RBP9.04□□□□□ -0.96
CLCN3-209ENST00000513761 EVA1CP58658 441 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 TIGD1Q96MW7 591 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 CEP89Q96ST8 783 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 TRAPPC8Q9Y2L5 1435 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 CCDC69A6NI79 296 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 TERF1P54274 439 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 HSP90AA4PQ58FG1 418 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 G2E3Q7L622 706 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 BBXQ8WY36 941 aaPredicted RBP9.04□□□□□ -0.96
CLCN3-209ENST00000513761 MYD88Q99836 296 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 MAP3K2Q9Y2U5 619 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 ERBB4Q15303 1308 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 FOXO3O43524 673 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 RAD21O60216 631 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 KIF4BQ2VIQ3 1234 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 AOPEPQ8N6M6 819 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 JARID2Q92833 1246 aaPredicted RBP9.04□□□□□ -0.96
CLCN3-209ENST00000513761 CTNNA3Q9UI47 895 aa9.04□□□□□ -0.96
CLCN3-209ENST00000513761 IMMTQ16891 758 aaKnown RBP9.03□□□□□ -0.96
CLCN3-209ENST00000513761 MAGEC2Q9UBF1 373 aaPredicted RBP9.03□□□□□ -0.96
CLCN3-209ENST00000513761 DNAI1Q9UI46 699 aa9.03□□□□□ -0.96
CLCN3-209ENST00000513761 CNNM1Q9NRU3 951 aa9.03□□□□□ -0.96
CLCN3-209ENST00000513761 ZNF500O60304 480 aaPredicted RBP9.03□□□□□ -0.96
CLCN3-209ENST00000513761 LMAN1P49257 510 aa9.03□□□□□ -0.96
CLCN3-209ENST00000513761 CCDC82Q8N4S0 544 aa9.03□□□□□ -0.96
CLCN3-209ENST00000513761 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.03□□□□□ -0.96
CLCN3-209ENST00000513761 CEP126Q9P2H0 1117 aa9.03□□□□□ -0.96
CLCN3-209ENST00000513761 EIF4A2Q14240 407 aaKnown RBP9.03□□□□□ -0.96
CLCN3-209ENST00000513761 PA2G4Q9UQ80 394 aaKnown RBP9.03□□□□□ -0.96
CLCN3-209ENST00000513761 CDKL5O76039 1030 aa9.03□□□□□ -0.96
CLCN3-209ENST00000513761 GNG11P61952 73 aa9.03□□□□□ -0.96
CLCN3-209ENST00000513761 CCDC57Q2TAC2 916 aa9.02□□□□□ -0.96
CLCN3-209ENST00000513761 JAKMIP3Q5VZ66 844 aa9.02□□□□□ -0.96
CLCN3-209ENST00000513761 ZNHIT6Q9NWK9 470 aaKnown RBP9.02□□□□□ -0.96
CLCN3-209ENST00000513761 GOLGA8BA8MQT2 603 aa9.02□□□□□ -0.97
CLCN3-209ENST00000513761 PIK3R4Q99570 1358 aa9.02□□□□□ -0.97
CLCN3-209ENST00000513761 SLU7O95391 586 aaKnown RBP9.02□□□□□ -0.97
CLCN3-209ENST00000513761 CAVIN2O95810 425 aa9.02□□□□□ -0.97
CLCN3-209ENST00000513761 HAND2P61296 217 aa9.02□□□□□ -0.97
CLCN3-209ENST00000513761 SAMD9Q5K651 1589 aa9.02□□□□□ -0.97
CLCN3-209ENST00000513761 KIF5CO60282 957 aa9.02□□□□□ -0.97
CLCN3-209ENST00000513761 IDH1O75874 414 aaKnown RBP9.02□□□□□ -0.97
CLCN3-209ENST00000513761 RDXP35241 583 aaKnown RBP9.02□□□□□ -0.97
CLCN3-209ENST00000513761 CNNM3Q8NE01 707 aa9.02□□□□□ -0.97
CLCN3-209ENST00000513761 FANCAO15360 1455 aa9.02□□□□□ -0.97
CLCN3-209ENST00000513761 OGFRQ9NZT2 677 aa9.02□□□□□ -0.97
CLCN3-209ENST00000513761 CHPF2Q9P2E5 772 aa9.02□□□□□ -0.97
CLCN3-209ENST00000513761 DBF4Q9UBU7 674 aaPredicted RBP9.02□□□□□ -0.97
CLCN3-209ENST00000513761 GOLIM4O00461 696 aa9.01□□□□□ -0.97
CLCN3-209ENST00000513761 DHX37Q8IY37 1157 aaKnown RBP9.01□□□□□ -0.97
CLCN3-209ENST00000513761 BRD1O95696 1058 aa9.01□□□□□ -0.97
CLCN3-209ENST00000513761 HMGB1P09429 215 aaKnown RBP9.01□□□□□ -0.97
CLCN3-209ENST00000513761 IFIT1P09914 478 aaKnown RBP9.01□□□□□ -0.97
CLCN3-209ENST00000513761 TXLNAP40222 546 aa9.01□□□□□ -0.97
CLCN3-209ENST00000513761 DDX46Q7L014 1031 aaKnown RBP9.01□□□□□ -0.97
CLCN3-209ENST00000513761 ZSCAN16Q9H4T2 348 aaPredicted RBP9.01□□□□□ -0.97
CLCN3-209ENST00000513761 BCL2L12Q9HB09 334 aa9.01□□□□□ -0.97
CLCN3-209ENST00000513761 NMIQ13287 307 aaPredicted RBP9.01□□□□□ -0.97
CLCN3-209ENST00000513761 LARP1Q6PKG0 1096 aaKnown RBP9.01□□□□□ -0.97
CLCN3-209ENST00000513761 CCDC150Q8NCX0 1101 aa9.01□□□□□ -0.97
CLCN3-209ENST00000513761 ZNF397Q8NF99 534 aaPredicted RBP9.01□□□□□ -0.97
CLCN3-209ENST00000513761 CENPHQ9H3R5 247 aa9.01□□□□□ -0.97
CLCN3-209ENST00000513761 TATP17735 454 aaPredicted RBP9.01□□□□□ -0.97
CLCN3-209ENST00000513761 CABP4P57796 275 aa9.01□□□□□ -0.97
CLCN3-209ENST00000513761 CCDC181Q5TID7 509 aa9.01□□□□□ -0.97
CLCN3-209ENST00000513761 Q6ZUG5 572 aa9.01□□□□□ -0.97
CLCN3-209ENST00000513761 CCDC144CPQ8IYA2 1237 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms