RNA–Protein interactions for RNA: ENST00000513654.5

EXOSC9-212, Transcript of exosome component 9, humanhuman

TSL 2

Gene EXOSC9, Length 3,882 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-212ENST00000513654 SH2B1Q9NRF2 756 aaPredicted RBP7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 HYPKQ9NX55 129 aa7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 ATF5Q9Y2D1 282 aaPredicted RBP7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 USP27XA6NNY8 438 aa7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 CEBPZQ03701 1054 aaKnown RBP7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 STK3Q13188 491 aa7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 ADCK5Q3MIX3 580 aa7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 FBXO38Q6PIJ6 1188 aa7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 CDC37L1Q7L3B6 337 aa7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 RUFY2Q8WXA3 655 aa7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 TCEANC2Q96MN5 208 aa7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 NOL10Q9BSC4 688 aaKnown RBP7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 DDX19AQ9NUU7 478 aaKnown RBP7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 YEATS2Q9ULM3 1422 aa7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 ZC3H13Q5T200 1668 aaKnown RBP7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 ME3Q16798 604 aa7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 GTF3C6Q969F1 213 aa7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 SCAND2PQ9GZW5 306 aaPredicted RBP7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 CD163L1Q9NR16 1453 aa7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 KIAA0232Q92628 1395 aa7.79□□□□□ -1.16
EXOSC9-212ENST00000513654 FOXO3O43524 673 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 RHPN1Q8TCX5 695 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 CCDC171Q6TFL3 1326 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 ABCC3O15438 1527 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 IFT172Q9UG01 1749 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 HTATSF1O43719 755 aaKnown RBP7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 RAB11FIP3O75154 756 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 SLU7O95391 586 aaKnown RBP7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 PDCP20941 246 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 EIF4A2Q14240 407 aaKnown RBP7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 GORABQ5T7V8 394 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 PLA2G4DQ86XP0 818 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 LRRC8AQ8IWT6 810 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 ERO1AQ96HE7 468 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 USP16Q9Y5T5 823 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 CPSF1Q10570 1443 aaKnown RBP7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 NCKAP5LQ9HCH0 1330 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 CAMSAP1Q5T5Y3 1602 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 SRGAP3O43295 1099 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 NR1I2O75469 434 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 VPS53Q5VIR6 699 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 PPP1R42Q7Z4L9 355 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 TDRD7Q8NHU6 1098 aaKnown RBP7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 SYTL4Q96C24 671 aaPredicted RBP7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 CCDC69A6NI79 296 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 EPB41L2O43491 1005 aaKnown RBP7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 PTH1RQ03431 593 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 BMS1Q14692 1282 aaKnown RBP7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 CCDC30Q5VVM6 783 aa7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 DNAJC2Q99543 621 aaKnown RBP7.78□□□□□ -1.16
EXOSC9-212ENST00000513654 CLSTN2Q9H4D0 955 aa7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 NPHP3Q7Z494 1330 aa7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 POLR3GO15318 223 aaPredicted RBP7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 NPM1P06748 294 aaKnown RBP eCLIP7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 TNNT3P45378 269 aaPredicted RBP7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 FOSBP53539 338 aa7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 OSCARQ8IYS5 282 aa7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 SOS1Q07889 1333 aaPredicted RBP7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 MROH1Q8NDA8 1641 aa7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 H3BQV1 296 aa7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 NEMFO60524 1076 aa7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 RBM6P78332 1123 aaKnown RBP7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 ERCC6LQ2NKX8 1250 aa7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 IFFO2Q5TF58 517 aa7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 IPO4Q8TEX9 1081 aaKnown RBP7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 LEO1Q8WVC0 666 aaPredicted RBP7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 KIF1BPQ96EK5 621 aa7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 CHMP4AQ9BY43 222 aa7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 TPCN1Q9ULQ1 816 aa7.77□□□□□ -1.17
EXOSC9-212ENST00000513654 NUTM2FA1L443 756 aa7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 HSP90AB2PQ58FF8 381 aa7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 LARP1Q6PKG0 1096 aaKnown RBP7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 HOMER1Q86YM7 354 aa7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 KLHL34Q8N239 644 aa7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 TRIM34Q9BYJ4 488 aa7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 SLC52A1Q9NWF4 448 aa7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 ZCCHC11Q5TAX3 1644 aaKnown RBP7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 AOX1Q06278 1338 aa7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 PPLO60437 1756 aa7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 TEX35Q5T0J7 233 aa7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 PI4K2BQ8TCG2 481 aa7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 IL17RAQ96F46 866 aa7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 USP44Q9H0E7 712 aa7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 ARHGEF28Q8N1W1 1705 aaKnown RBP7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 A0A087WWV3 80 aa7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 SNW1Q13573 536 aaKnown RBP7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 ZRSR1Q15695 479 aaKnown RBP7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 DDX11Q96FC9 970 aa7.76□□□□□ -1.17
EXOSC9-212ENST00000513654 GLRX3O76003 335 aaKnown RBP7.75□□□□□ -1.17
EXOSC9-212ENST00000513654 PSMA5P28066 241 aa7.75□□□□□ -1.17
EXOSC9-212ENST00000513654 HNRNPH2P55795 449 aaKnown RBP7.75□□□□□ -1.17
EXOSC9-212ENST00000513654 BLOC1S2Q6QNY1 142 aa7.75□□□□□ -1.17
EXOSC9-212ENST00000513654 ZSWIM6Q9HCJ5 1215 aa7.75□□□□□ -1.17
EXOSC9-212ENST00000513654 RBM8AQ9Y5S9 174 aaKnown RBP7.75□□□□□ -1.17
EXOSC9-212ENST00000513654 HSP90B1P14625 803 aaKnown RBP7.75□□□□□ -1.17
EXOSC9-212ENST00000513654 EIF2S2P20042 333 aaKnown RBP7.75□□□□□ -1.17
EXOSC9-212ENST00000513654 RNF20Q5VTR2 975 aa7.75□□□□□ -1.17
EXOSC9-212ENST00000513654 SYT10Q6XYQ8 523 aa7.75□□□□□ -1.17
EXOSC9-212ENST00000513654 CCAR2Q8N163 923 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms