RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 NCLP19338 710 aaKnown RBP9.8□□□□□ -0.84
DDR1-273ENST00000513514 CHMLP26374 656 aa9.8□□□□□ -0.84
DDR1-273ENST00000513514 NASPP49321 788 aaPredicted RBP9.8□□□□□ -0.84
DDR1-273ENST00000513514 AKAP4Q5JQC9 854 aa9.8□□□□□ -0.84
DDR1-273ENST00000513514 SPRYD3Q8NCJ5 442 aa9.8□□□□□ -0.84
DDR1-273ENST00000513514 GPATCH3Q96I76 525 aa9.8□□□□□ -0.84
DDR1-273ENST00000513514 PRDM11Q9NQV5 511 aa9.8□□□□□ -0.84
DDR1-273ENST00000513514 STRN4Q9NRL3 753 aa9.8□□□□□ -0.84
DDR1-273ENST00000513514 LMBRD1Q9NUN5 540 aa9.8□□□□□ -0.84
DDR1-273ENST00000513514 CASZ1Q86V15 1759 aa9.8□□□□□ -0.84
DDR1-273ENST00000513514 WDR33Q9C0J8 1336 aaKnown RBP9.8□□□□□ -0.84
DDR1-273ENST00000513514 ABCC6O95255 1503 aa9.79□□□□□ -0.84
DDR1-273ENST00000513514 PLEKHO1Q53GL0 409 aaPredicted RBP9.79□□□□□ -0.84
DDR1-273ENST00000513514 IFFO2Q5TF58 517 aa9.79□□□□□ -0.84
DDR1-273ENST00000513514 SLC4A10Q6U841 1118 aa9.79□□□□□ -0.84
DDR1-273ENST00000513514 FAM196AQ6ZSG2 479 aa9.79□□□□□ -0.84
DDR1-273ENST00000513514 CNTROBQ8N137 903 aa9.79□□□□□ -0.84
DDR1-273ENST00000513514 TM6SF1Q9BZW5 370 aa9.79□□□□□ -0.84
DDR1-273ENST00000513514 GLRX3O76003 335 aaKnown RBP9.78□□□□□ -0.84
DDR1-273ENST00000513514 CD2BP2O95400 341 aaKnown RBP9.78□□□□□ -0.84
DDR1-273ENST00000513514 BRD1O95696 1058 aa9.78□□□□□ -0.84
DDR1-273ENST00000513514 SSFA2P28290 1259 aa9.78□□□□□ -0.84
DDR1-273ENST00000513514 HSPA4P34932 840 aa9.78□□□□□ -0.84
DDR1-273ENST00000513514 UVSSAQ2YD98 709 aa9.78□□□□□ -0.84
DDR1-273ENST00000513514 HDGFL1Q5TGJ6 251 aa9.78□□□□□ -0.84
DDR1-273ENST00000513514 ABTB2Q8N961 1025 aa9.78□□□□□ -0.84
DDR1-273ENST00000513514 ZSCAN31Q96LW9 406 aaPredicted RBP9.78□□□□□ -0.84
DDR1-273ENST00000513514 USP44Q9H0E7 712 aa9.78□□□□□ -0.84
DDR1-273ENST00000513514 GZF1Q9H116 711 aaPredicted RBP9.78□□□□□ -0.84
DDR1-273ENST00000513514 DBF4Q9UBU7 674 aaPredicted RBP9.78□□□□□ -0.84
DDR1-273ENST00000513514 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.78□□□□□ -0.84
DDR1-273ENST00000513514 TUBGCP6Q96RT7 1819 aa9.77□□□□□ -0.84
DDR1-273ENST00000513514 TPM2P07951 284 aa9.77□□□□□ -0.85
DDR1-273ENST00000513514 NEK4P51957 841 aa9.77□□□□□ -0.85
DDR1-273ENST00000513514 NBPF14Q5TI25 921 aa9.77□□□□□ -0.85
DDR1-273ENST00000513514 KIAA1211Q6ZU35 1233 aa9.77□□□□□ -0.85
DDR1-273ENST00000513514 ZSCAN30Q86W11 494 aa9.77□□□□□ -0.85
DDR1-273ENST00000513514 C16orf71Q8IYS4 520 aaPredicted RBP9.77□□□□□ -0.85
DDR1-273ENST00000513514 TMEM87AQ8NBN3 555 aa9.77□□□□□ -0.85
DDR1-273ENST00000513514 IL17REQ8NFR9 667 aa9.77□□□□□ -0.85
DDR1-273ENST00000513514 CHMP4CQ96CF2 233 aa9.77□□□□□ -0.85
DDR1-273ENST00000513514 TMX3Q96JJ7 454 aa9.77□□□□□ -0.85
DDR1-273ENST00000513514 SH2B1Q9NRF2 756 aaPredicted RBP9.77□□□□□ -0.85
DDR1-273ENST00000513514 RAD50Q92878 1312 aa9.77□□□□□ -0.85
DDR1-273ENST00000513514 ZBTB7AO95365 584 aa9.76□□□□□ -0.85
DDR1-273ENST00000513514 DDX58O95786 925 aaKnown RBP9.76□□□□□ -0.85
DDR1-273ENST00000513514 EIF4A1P60842 406 aaKnown RBP9.76□□□□□ -0.85
DDR1-273ENST00000513514 ZC3H6P61129 1189 aaKnown RBP9.76□□□□□ -0.85
DDR1-273ENST00000513514 NUTM2GQ5VZR2 741 aa9.76□□□□□ -0.85
DDR1-273ENST00000513514 LRSAM1Q6UWE0 723 aa9.76□□□□□ -0.85
DDR1-273ENST00000513514 G2E3Q7L622 706 aa9.76□□□□□ -0.85
DDR1-273ENST00000513514 PTF1AQ7RTS3 328 aa9.76□□□□□ -0.85
DDR1-273ENST00000513514 DNAAF4Q8WXU2 420 aa9.76□□□□□ -0.85
DDR1-273ENST00000513514 KCNB2Q92953 911 aa9.76□□□□□ -0.85
DDR1-273ENST00000513514 PDLIM2Q96JY6 352 aa9.76□□□□□ -0.85
DDR1-273ENST00000513514 RBM42Q9BTD8 480 aaKnown RBP9.76□□□□□ -0.85
DDR1-273ENST00000513514 ALDH8A1Q9H2A2 487 aaPredicted RBP9.76□□□□□ -0.85
DDR1-273ENST00000513514 HYPKQ9NX55 129 aa9.76□□□□□ -0.85
DDR1-273ENST00000513514 LMO7Q8WWI1 1683 aa9.76□□□□□ -0.85
DDR1-273ENST00000513514 GOLGB1Q14789 3259 aaKnown RBP9.76□□□□□ -0.85
DDR1-273ENST00000513514 HEG1Q9ULI3 1381 aa9.75□□□□□ -0.85
DDR1-273ENST00000513514 DCAF8L1A6NGE4 600 aa9.75□□□□□ -0.85
DDR1-273ENST00000513514 SGSM2O43147 1006 aa9.75□□□□□ -0.85
DDR1-273ENST00000513514 C1QTNF8P60827 252 aa9.75□□□□□ -0.85
DDR1-273ENST00000513514 TEFQ10587 303 aa9.75□□□□□ -0.85
DDR1-273ENST00000513514 KRT24Q2M2I5 525 aa9.75□□□□□ -0.85
DDR1-273ENST00000513514 ZSCAN23Q3MJ62 389 aa9.75□□□□□ -0.85
DDR1-273ENST00000513514 MCTP1Q6DN14 999 aa9.75□□□□□ -0.85
DDR1-273ENST00000513514 LARP1Q6PKG0 1096 aaKnown RBP9.75□□□□□ -0.85
DDR1-273ENST00000513514 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.75□□□□□ -0.85
DDR1-273ENST00000513514 CLASRPQ8N2M8 674 aaKnown RBP9.75□□□□□ -0.85
DDR1-273ENST00000513514 RHPN1Q8TCX5 695 aa9.75□□□□□ -0.85
DDR1-273ENST00000513514 SNRKQ9NRH2 765 aa9.75□□□□□ -0.85
DDR1-273ENST00000513514 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.75□□□□□ -0.85
DDR1-273ENST00000513514 NFAT5O94916 1531 aa9.75□□□□□ -0.85
DDR1-273ENST00000513514 UTYO14607 1347 aa9.75□□□□□ -0.85
DDR1-273ENST00000513514 COL15A1P39059 1388 aa9.75□□□□□ -0.85
DDR1-273ENST00000513514 KDM3BQ7LBC6 1761 aa9.74□□□□□ -0.85
DDR1-273ENST00000513514 TRIM6-TRIM34B2RNG4 842 aa9.74□□□□□ -0.85
DDR1-273ENST00000513514 F6X3S4 739 aa9.74□□□□□ -0.85
DDR1-273ENST00000513514 SMARCA5O60264 1052 aaPredicted RBP9.74□□□□□ -0.85
DDR1-273ENST00000513514 MSNP26038 577 aaKnown RBP9.74□□□□□ -0.85
DDR1-273ENST00000513514 PTGER2P43116 358 aa9.74□□□□□ -0.85
DDR1-273ENST00000513514 ANKRD1Q15327 319 aa9.74□□□□□ -0.85
DDR1-273ENST00000513514 BEND3Q5T5X7 828 aa9.74□□□□□ -0.85
DDR1-273ENST00000513514 ANO2Q9NQ90 1003 aa9.74□□□□□ -0.85
DDR1-273ENST00000513514 RTN4Q9NQC3 1192 aaKnown RBP9.74□□□□□ -0.85
DDR1-273ENST00000513514 RRAGDQ9NQL2 400 aaPredicted RBP9.74□□□□□ -0.85
DDR1-273ENST00000513514 LIMCH1Q9UPQ0 1083 aa9.74□□□□□ -0.85
DDR1-273ENST00000513514 LRRFIP2Q9Y608 721 aaKnown RBP9.74□□□□□ -0.85
DDR1-273ENST00000513514 RFX7Q2KHR2 1363 aa9.74□□□□□ -0.85
DDR1-273ENST00000513514 SLIT3O75094 1523 aa9.73□□□□□ -0.85
DDR1-273ENST00000513514 PNMA6EA0A0J9YXQ4 647 aa9.73□□□□□ -0.85
DDR1-273ENST00000513514 ZNF500O60304 480 aaPredicted RBP9.73□□□□□ -0.85
DDR1-273ENST00000513514 SURF6O75683 361 aaKnown RBP9.73□□□□□ -0.85
DDR1-273ENST00000513514 PSMA5P28066 241 aa9.73□□□□□ -0.85
DDR1-273ENST00000513514 C1orf141Q5JVX7 400 aa9.73□□□□□ -0.85
DDR1-273ENST00000513514 VPS53Q5VIR6 699 aa9.73□□□□□ -0.85
DDR1-273ENST00000513514 PPP1R42Q7Z4L9 355 aa9.73□□□□□ -0.85
DDR1-273ENST00000513514 OTUD7AQ8TE49 926 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms