RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 MAP3K2Q9Y2U5 619 aa4.96□□□□□ -1.62
VCAN-209ENST00000513016 SLC12A7Q9Y666 1083 aa4.96□□□□□ -1.62
VCAN-209ENST00000513016 ALDH1L1O75891 902 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 NLRP5P59047 1200 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 TMOD4Q9NZQ9 345 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 RBM19Q9Y4C8 960 aaKnown RBP4.95□□□□□ -1.62
VCAN-209ENST00000513016 IFIT3O14879 490 aaKnown RBP4.95□□□□□ -1.62
VCAN-209ENST00000513016 MNS1Q8NEH6 495 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 VEZTQ9HBM0 779 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 IL1RAPL2Q9NP60 686 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 GJA3Q9Y6H8 435 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 RPRD2Q5VT52 1461 aaKnown RBP4.95□□□□□ -1.62
VCAN-209ENST00000513016 GCP02774 474 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 CERS3Q8IU89 383 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 TMTC2Q8N394 836 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 JAKMIP1Q96N16 626 aaKnown RBP4.95□□□□□ -1.62
VCAN-209ENST00000513016 AMPD3Q01432 767 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 SSRP1Q08945 709 aaKnown RBP4.95□□□□□ -1.62
VCAN-209ENST00000513016 LARP1BQ659C4 914 aaKnown RBP4.95□□□□□ -1.62
VCAN-209ENST00000513016 CHD1LQ86WJ1 897 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 ARGLU1Q9NWB6 273 aaPredicted RBP4.95□□□□□ -1.62
VCAN-209ENST00000513016 EIF4G3O43432 1585 aaKnown RBP4.95□□□□□ -1.62
VCAN-209ENST00000513016 SOS1Q07889 1333 aaPredicted RBP4.95□□□□□ -1.62
VCAN-209ENST00000513016 GNPATO15228 680 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 EPB41L2O43491 1005 aaKnown RBP4.95□□□□□ -1.62
VCAN-209ENST00000513016 ME1P48163 572 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 RBM26Q5T8P6 1007 aaKnown RBP4.95□□□□□ -1.62
VCAN-209ENST00000513016 CCDC97Q96F63 343 aaPredicted RBP4.95□□□□□ -1.62
VCAN-209ENST00000513016 PICK1Q9NRD5 415 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 SLAIN2Q9P270 581 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 H7C1D1 291 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 NOM1Q5C9Z4 860 aaKnown RBP4.95□□□□□ -1.62
VCAN-209ENST00000513016 CCDC181Q5TID7 509 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 USP37Q86T82 979 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 CNBD1Q8NA66 436 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 ERMNQ8TAM6 284 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 MAP3K1Q13233 1512 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 ALDH1B1P30837 517 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 LRRC45Q96CN5 670 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 MIS18AQ9NYP9 233 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 FBXO3Q9UK99 471 aa4.95□□□□□ -1.62
VCAN-209ENST00000513016 PPIP5K1Q6PFW1 1433 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 CA8P35219 290 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 DCTN1Q14203 1278 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 JAKMIP3Q5VZ66 844 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 CWC27Q6UX04 472 aaKnown RBP4.94□□□□□ -1.62
VCAN-209ENST00000513016 CALML4Q96GE6 196 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 RBM27Q9P2N5 1060 aaKnown RBP4.94□□□□□ -1.62
VCAN-209ENST00000513016 ZRANB1Q9UGI0 708 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 ATP10BO94823 1461 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 LPXNO60711 386 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 FLIIQ13045 1269 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 STK3Q13188 491 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 TTC6Q86TZ1 520 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 EVI5LQ96CN4 794 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 BOLA2Q9H3K6 86 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 IL16Q14005 1332 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 GOLGA8AA7E2F4 631 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 GOLGA8BA8MQT2 603 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 NEFHP12036 1026 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 HMGN5P82970 282 aaKnown RBP4.94□□□□□ -1.62
VCAN-209ENST00000513016 NAA16Q6N069 864 aaPredicted RBP4.94□□□□□ -1.62
VCAN-209ENST00000513016 DHX37Q8IY37 1157 aaKnown RBP4.94□□□□□ -1.62
VCAN-209ENST00000513016 FERMT1Q9BQL6 677 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 RFX1P22670 979 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 IL15P40933 162 aaPredicted RBP4.94□□□□□ -1.62
VCAN-209ENST00000513016 ATP2B3Q16720 1220 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 ZNF397Q8NF99 534 aaPredicted RBP4.94□□□□□ -1.62
VCAN-209ENST00000513016 PIBF1Q8WXW3 757 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 IP6K1Q92551 441 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 KRT23Q9C075 422 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 SLC5A4Q9NY91 659 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 NSFL1CQ9UNZ2 370 aaKnown RBP4.94□□□□□ -1.62
VCAN-209ENST00000513016 IVNS1ABPQ9Y6Y0 642 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 BRPF1P55201 1214 aaPredicted RBP4.94□□□□□ -1.62
VCAN-209ENST00000513016 OTUD7BQ6GQQ9 843 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 VPS36Q86VN1 386 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 ABCC2Q92887 1545 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 SMTNL1A8MU46 457 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 MAP4K4O95819 1239 aaPredicted RBP4.94□□□□□ -1.62
VCAN-209ENST00000513016 MX1P20591 662 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 CYP7A1P22680 504 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 SEPT7Q16181 437 aaKnown RBP4.94□□□□□ -1.62
VCAN-209ENST00000513016 MFSD6Q6ZSS7 791 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 NIM1KQ8IY84 436 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 ZNF592Q92610 1267 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 CNNM2Q9H8M5 875 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 TCP11L1Q9NUJ3 509 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 SEPT11Q9NVA2 429 aaKnown RBP4.94□□□□□ -1.62
VCAN-209ENST00000513016 FLT4P35916 1363 aa4.94□□□□□ -1.62
VCAN-209ENST00000513016 NBPF7P0C2Y1 421 aaPredicted RBP4.93□□□□□ -1.62
VCAN-209ENST00000513016 GNAT2P19087 354 aa4.93□□□□□ -1.62
VCAN-209ENST00000513016 CKAP2LQ8IYA6 745 aa4.93□□□□□ -1.62
VCAN-209ENST00000513016 SERPINC1P01008 464 aa4.93□□□□□ -1.62
VCAN-209ENST00000513016 TSPY3P0CV98 308 aa4.93□□□□□ -1.62
VCAN-209ENST00000513016 TSPY8P0CW00 308 aa4.93□□□□□ -1.62
VCAN-209ENST00000513016 LARGE2Q8N3Y3 721 aa4.93□□□□□ -1.62
VCAN-209ENST00000513016 ATP5J2-PTCD1G3V325 749 aa4.93□□□□□ -1.62
VCAN-209ENST00000513016 UBE3BQ7Z3V4 1068 aa4.93□□□□□ -1.62
VCAN-209ENST00000513016 NUTM1Q86Y26 1132 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms