RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 MEGF6O75095 1541 aa16.45■□□□□ 0.22
DEPDC1B-206ENST00000512452 WDR17Q8IZU2 1322 aa16.45■□□□□ 0.22
DEPDC1B-206ENST00000512452 MRC1P22897 1456 aa16.44■□□□□ 0.22
DEPDC1B-206ENST00000512452 CTCFP49711 727 aaPredicted RBP16.44■□□□□ 0.22
DEPDC1B-206ENST00000512452 NUCB1Q02818 461 aa16.44■□□□□ 0.22
DEPDC1B-206ENST00000512452 HDGFL1Q5TGJ6 251 aa16.44■□□□□ 0.22
DEPDC1B-206ENST00000512452 MPRIPQ6WCQ1 1025 aa16.44■□□□□ 0.22
DEPDC1B-206ENST00000512452 SKAP1Q86WV1 359 aa16.44■□□□□ 0.22
DEPDC1B-206ENST00000512452 RPAP2Q8IXW5 612 aaPredicted RBP16.44■□□□□ 0.22
DEPDC1B-206ENST00000512452 IFNL2Q8IZJ0 200 aa16.44■□□□□ 0.22
DEPDC1B-206ENST00000512452 SCN11AQ9UI33 1791 aa16.43■□□□□ 0.22
DEPDC1B-206ENST00000512452 NHSQ6T4R5 1651 aa16.43■□□□□ 0.22
DEPDC1B-206ENST00000512452 PHKG2P15735 406 aa16.43■□□□□ 0.22
DEPDC1B-206ENST00000512452 FLIIQ13045 1269 aa16.43■□□□□ 0.22
DEPDC1B-206ENST00000512452 COL23A1Q86Y22 540 aaPredicted RBP16.42■□□□□ 0.22
DEPDC1B-206ENST00000512452 RRAGCQ9HB90 399 aa16.42■□□□□ 0.22
DEPDC1B-206ENST00000512452 TUBGCP6Q96RT7 1819 aa16.42■□□□□ 0.22
DEPDC1B-206ENST00000512452 G2E3Q7L622 706 aa16.41■□□□□ 0.22
DEPDC1B-206ENST00000512452 ANKRD44Q8N8A2 993 aa16.41■□□□□ 0.22
DEPDC1B-206ENST00000512452 DCAF5Q96JK2 942 aa16.41■□□□□ 0.22
DEPDC1B-206ENST00000512452 CICQ96RK0 1608 aaPredicted RBP16.41■□□□□ 0.22
DEPDC1B-206ENST00000512452 KDM6AO15550 1401 aaPredicted RBP16.4■□□□□ 0.22
DEPDC1B-206ENST00000512452 GNAI3P08754 354 aa16.4■□□□□ 0.22
DEPDC1B-206ENST00000512452 CARD10Q9BWT7 1032 aa16.4■□□□□ 0.22
DEPDC1B-206ENST00000512452 SLC52A2Q9HAB3 445 aa16.4■□□□□ 0.22
DEPDC1B-206ENST00000512452 KCNQ4P56696 695 aa16.39■□□□□ 0.21
DEPDC1B-206ENST00000512452 FKBP5Q13451 457 aaPredicted RBP16.39■□□□□ 0.21
DEPDC1B-206ENST00000512452 CHD1LQ86WJ1 897 aa16.39■□□□□ 0.21
DEPDC1B-206ENST00000512452 AIDAQ96BJ3 306 aa16.39■□□□□ 0.21
DEPDC1B-206ENST00000512452 BTAF1O14981 1849 aa16.39■□□□□ 0.21
DEPDC1B-206ENST00000512452 WNK3Q9BYP7 1800 aa16.38■□□□□ 0.21
DEPDC1B-206ENST00000512452 C10orf71Q711Q0 1435 aa16.38■□□□□ 0.21
DEPDC1B-206ENST00000512452 HMMRO75330 724 aa16.38■□□□□ 0.21
DEPDC1B-206ENST00000512452 SIRT2Q8IXJ6 389 aa16.38■□□□□ 0.21
DEPDC1B-206ENST00000512452 IPO9Q96P70 1041 aaKnown RBP16.38■□□□□ 0.21
DEPDC1B-206ENST00000512452 DCTPP1Q9H773 170 aa16.38■□□□□ 0.21
DEPDC1B-206ENST00000512452 DBF4Q9UBU7 674 aaPredicted RBP16.38■□□□□ 0.21
DEPDC1B-206ENST00000512452 LBX1P52954 281 aa16.37■□□□□ 0.21
DEPDC1B-206ENST00000512452 IBTKQ9P2D0 1353 aaPredicted RBP16.37■□□□□ 0.21
DEPDC1B-206ENST00000512452 CEP85Q6P2H3 762 aa16.36■□□□□ 0.21
DEPDC1B-206ENST00000512452 ARHGAP27Q6ZUM4 889 aa16.36■□□□□ 0.21
DEPDC1B-206ENST00000512452 DDRGK1Q96HY6 314 aa16.36■□□□□ 0.21
DEPDC1B-206ENST00000512452 C1orf115Q9H7X2 142 aa16.36■□□□□ 0.21
DEPDC1B-206ENST00000512452 PCDH11XQ9BZA7 1347 aa16.36■□□□□ 0.21
DEPDC1B-206ENST00000512452 PCDH11YQ9BZA8 1340 aa16.36■□□□□ 0.21
DEPDC1B-206ENST00000512452 KAT6BQ8WYB5 2073 aa16.35■□□□□ 0.21
DEPDC1B-206ENST00000512452 CYP27B1O15528 508 aa16.35■□□□□ 0.21
DEPDC1B-206ENST00000512452 KCNQ3O43525 872 aa16.35■□□□□ 0.21
DEPDC1B-206ENST00000512452 GNAI2P04899 355 aa16.35■□□□□ 0.21
DEPDC1B-206ENST00000512452 ZNF790Q6PG37 636 aa16.35■□□□□ 0.21
DEPDC1B-206ENST00000512452 SLC4A10Q6U841 1118 aa16.35■□□□□ 0.21
DEPDC1B-206ENST00000512452 MEIS3Q99687 375 aa16.35■□□□□ 0.21
DEPDC1B-206ENST00000512452 MKRN1Q9UHC7 482 aaKnown RBP16.35■□□□□ 0.21
DEPDC1B-206ENST00000512452 NKX1-1Q15270 411 aaPredicted RBP16.34■□□□□ 0.21
DEPDC1B-206ENST00000512452 ZCRB1Q8TBF4 217 aaKnown RBP16.34■□□□□ 0.21
DEPDC1B-206ENST00000512452 HYPKQ9NX55 129 aa16.34■□□□□ 0.21
DEPDC1B-206ENST00000512452 KCPQ6ZWJ8 1503 aa16.34■□□□□ 0.21
DEPDC1B-206ENST00000512452 F6X3S4 739 aa16.33■□□□□ 0.2
DEPDC1B-206ENST00000512452 IL2RBP14784 551 aa16.33■□□□□ 0.2
DEPDC1B-206ENST00000512452 C9orf131Q5VYM1 1079 aa16.33■□□□□ 0.2
DEPDC1B-206ENST00000512452 CHPF2Q9P2E5 772 aa16.33■□□□□ 0.2
DEPDC1B-206ENST00000512452 ERVV-2B6SEH9 535 aa16.32■□□□□ 0.2
DEPDC1B-206ENST00000512452 EIF5BO60841 1220 aaKnown RBP16.32■□□□□ 0.2
DEPDC1B-206ENST00000512452 EIF2S2P20042 333 aaKnown RBP16.32■□□□□ 0.2
DEPDC1B-206ENST00000512452 ANKRD45Q5TZF3 282 aa16.32■□□□□ 0.2
DEPDC1B-206ENST00000512452 DDX21Q9NR30 783 aaKnown RBP eCLIP16.32■□□□□ 0.2
DEPDC1B-206ENST00000512452 ZBTB47Q9UFB7 747 aaPredicted RBP16.32■□□□□ 0.2
DEPDC1B-206ENST00000512452 HDAC5Q9UQL6 1122 aa16.32■□□□□ 0.2
DEPDC1B-206ENST00000512452 DNAAF4Q8WXU2 420 aa16.31■□□□□ 0.2
DEPDC1B-206ENST00000512452 NECTIN2Q92692 538 aa16.31■□□□□ 0.2
DEPDC1B-206ENST00000512452 LNPKQ9C0E8 428 aa16.31■□□□□ 0.2
DEPDC1B-206ENST00000512452 SRCIN1Q9C0H9 1055 aa16.31■□□□□ 0.2
DEPDC1B-206ENST00000512452 ALDH1L1O75891 902 aa16.3■□□□□ 0.2
DEPDC1B-206ENST00000512452 DDX58O95786 925 aaKnown RBP16.3■□□□□ 0.2
DEPDC1B-206ENST00000512452 BMP2KLQ5H9B9 411 aa16.3■□□□□ 0.2
DEPDC1B-206ENST00000512452 PHAXQ9H814 394 aaKnown RBP16.3■□□□□ 0.2
DEPDC1B-206ENST00000512452 UPF2Q9HAU5 1272 aaKnown RBP16.3■□□□□ 0.2
DEPDC1B-206ENST00000512452 BCS1LQ9Y276 419 aa16.3■□□□□ 0.2
DEPDC1B-206ENST00000512452 PDE4DIPQ5VU43 2346 aa16.29■□□□□ 0.2
DEPDC1B-206ENST00000512452 ERBB4Q15303 1308 aa16.29■□□□□ 0.2
DEPDC1B-206ENST00000512452 SNRPA1P09661 255 aaKnown RBP16.29■□□□□ 0.2
DEPDC1B-206ENST00000512452 CABP4P57796 275 aa16.29■□□□□ 0.2
DEPDC1B-206ENST00000512452 KSR2Q6VAB6 950 aa16.29■□□□□ 0.2
DEPDC1B-206ENST00000512452 TTC5Q8N0Z6 440 aa16.29■□□□□ 0.2
DEPDC1B-206ENST00000512452 NFATC2IPQ8NCF5 419 aa16.29■□□□□ 0.2
DEPDC1B-206ENST00000512452 FMNL2Q96PY5 1086 aa16.29■□□□□ 0.2
DEPDC1B-206ENST00000512452 NOP58Q9Y2X3 529 aaKnown RBP16.29■□□□□ 0.2
DEPDC1B-206ENST00000512452 ATP8B2P98198 1209 aa16.28■□□□□ 0.2
DEPDC1B-206ENST00000512452 BEND3Q5T5X7 828 aa16.28■□□□□ 0.2
DEPDC1B-206ENST00000512452 NPM2Q86SE8 214 aaKnown RBP16.28■□□□□ 0.2
DEPDC1B-206ENST00000512452 USP44Q9H0E7 712 aa16.28■□□□□ 0.2
DEPDC1B-206ENST00000512452 PI4KAP2A4QPH2 592 aa16.27■□□□□ 0.2
DEPDC1B-206ENST00000512452 UBTFL1P0CB47 393 aaPredicted RBP16.27■□□□□ 0.2
DEPDC1B-206ENST00000512452 ERICH6Q7L0X2 663 aa16.27■□□□□ 0.2
DEPDC1B-206ENST00000512452 PI4KAP1Q8N8J0 262 aa16.27■□□□□ 0.2
DEPDC1B-206ENST00000512452 CREBZFQ9NS37 354 aa16.27■□□□□ 0.2
DEPDC1B-206ENST00000512452 LAMB4A4D0S4 1761 aa16.27■□□□□ 0.2
DEPDC1B-206ENST00000512452 POTEDQ86YR6 584 aa16.26■□□□□ 0.19
DEPDC1B-206ENST00000512452 WBP1LQ9NX94 342 aa16.26■□□□□ 0.19
DEPDC1B-206ENST00000512452 C5P01031 1676 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms