RNA–Protein interactions for RNA: ENST00000512053.1

HMGCR-211, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 465 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-211ENST00000512053 VEGFAP15692 232 aaPredicted RBP9.82□□□□□ -0.84
HMGCR-211ENST00000512053 LMNB1P20700 586 aa9.82□□□□□ -0.84
HMGCR-211ENST00000512053 TM4SF1P30408 202 aa9.82□□□□□ -0.84
HMGCR-211ENST00000512053 HTRA3P83110 453 aa9.82□□□□□ -0.84
HMGCR-211ENST00000512053 INTS5Q6P9B9 1019 aaKnown RBP9.82□□□□□ -0.84
HMGCR-211ENST00000512053 AEBP1Q8IUX7 1158 aa9.82□□□□□ -0.84
HMGCR-211ENST00000512053 DNAJC10Q8IXB1 793 aa9.82□□□□□ -0.84
HMGCR-211ENST00000512053 TNS4Q8IZW8 715 aa9.82□□□□□ -0.84
HMGCR-211ENST00000512053 TTLL6Q8N841 843 aa9.82□□□□□ -0.84
HMGCR-211ENST00000512053 JMYQ8N9B5 988 aa9.82□□□□□ -0.84
HMGCR-211ENST00000512053 SLC52A2Q9HAB3 445 aa9.82□□□□□ -0.84
HMGCR-211ENST00000512053 C4AP0C0L4 1744 aa9.82□□□□□ -0.84
HMGCR-211ENST00000512053 KCPQ6ZWJ8 1503 aa9.82□□□□□ -0.84
HMGCR-211ENST00000512053 KDM6AO15550 1401 aaPredicted RBP9.82□□□□□ -0.84
HMGCR-211ENST00000512053 ZC3H4Q9UPT8 1303 aaKnown RBP9.82□□□□□ -0.84
HMGCR-211ENST00000512053 GLTPD2A6NH11 291 aa9.81□□□□□ -0.84
HMGCR-211ENST00000512053 H0YIN7 160 aa9.81□□□□□ -0.84
HMGCR-211ENST00000512053 SERPINB2P05120 415 aa9.81□□□□□ -0.84
HMGCR-211ENST00000512053 GOLGA2Q08379 1002 aa9.81□□□□□ -0.84
HMGCR-211ENST00000512053 GSE1Q14687 1217 aa9.81□□□□□ -0.84
HMGCR-211ENST00000512053 NPM2Q86SE8 214 aaKnown RBP9.81□□□□□ -0.84
HMGCR-211ENST00000512053 NPHP1O15259 732 aa9.8□□□□□ -0.84
HMGCR-211ENST00000512053 NFIXQ14938 502 aa9.8□□□□□ -0.84
HMGCR-211ENST00000512053 COL13A1Q5TAT6 717 aaPredicted RBP9.8□□□□□ -0.84
HMGCR-211ENST00000512053 TTC5Q8N0Z6 440 aa9.8□□□□□ -0.84
HMGCR-211ENST00000512053 NARFQ9UHQ1 456 aa9.8□□□□□ -0.84
HMGCR-211ENST00000512053 N4BP2Q86UW6 1770 aaPredicted RBP9.8□□□□□ -0.84
HMGCR-211ENST00000512053 ANKRD26Q9UPS8 1709 aa9.79□□□□□ -0.84
HMGCR-211ENST00000512053 UTRNP46939 3433 aa9.79□□□□□ -0.84
HMGCR-211ENST00000512053 A0A087WZG4 1122 aa9.79□□□□□ -0.84
HMGCR-211ENST00000512053 RNMTO43148 476 aaKnown RBP9.79□□□□□ -0.84
HMGCR-211ENST00000512053 STARD3NLO95772 234 aa9.79□□□□□ -0.84
HMGCR-211ENST00000512053 HSPA5P11021 654 aaKnown RBP9.79□□□□□ -0.84
HMGCR-211ENST00000512053 CYP19A1P11511 503 aaPredicted RBP9.79□□□□□ -0.84
HMGCR-211ENST00000512053 RASSF7Q02833 373 aa9.79□□□□□ -0.84
HMGCR-211ENST00000512053 SLC39A6Q13433 755 aa9.79□□□□□ -0.84
HMGCR-211ENST00000512053 BICDL1Q6ZP65 573 aa9.79□□□□□ -0.84
HMGCR-211ENST00000512053 C2CD5Q86YS7 1000 aa9.79□□□□□ -0.84
HMGCR-211ENST00000512053 PCGF6Q9BYE7 350 aa9.79□□□□□ -0.84
HMGCR-211ENST00000512053 LGR6Q9HBX8 967 aa9.79□□□□□ -0.84
HMGCR-211ENST00000512053 ZNF831Q5JPB2 1677 aa9.79□□□□□ -0.84
HMGCR-211ENST00000512053 SOS1Q07889 1333 aaPredicted RBP9.79□□□□□ -0.84
HMGCR-211ENST00000512053 CLSPNQ9HAW4 1339 aa9.79□□□□□ -0.84
HMGCR-211ENST00000512053 COL15A1P39059 1388 aa9.78□□□□□ -0.84
HMGCR-211ENST00000512053 CANXP27824 592 aaKnown RBP9.78□□□□□ -0.84
HMGCR-211ENST00000512053 IL13P35225 146 aa9.78□□□□□ -0.84
HMGCR-211ENST00000512053 PDE6BP35913 854 aa9.78□□□□□ -0.84
HMGCR-211ENST00000512053 VSIG10Q8N0Z9 540 aa9.78□□□□□ -0.84
HMGCR-211ENST00000512053 ZNF622Q969S3 477 aaKnown RBP eCLIP9.78□□□□□ -0.841e-7■□□□□ 8.8
HMGCR-211ENST00000512053 PDZRN3Q9UPQ7 1066 aa9.78□□□□□ -0.84
HMGCR-211ENST00000512053 KIF13BQ9NQT8 1826 aa9.77□□□□□ -0.84
HMGCR-211ENST00000512053 HMOX1P09601 288 aa9.77□□□□□ -0.85
HMGCR-211ENST00000512053 TEX13AQ9BXU3 409 aaPredicted RBP9.77□□□□□ -0.85
HMGCR-211ENST00000512053 ZBTB1Q9Y2K1 713 aa9.77□□□□□ -0.85
HMGCR-211ENST00000512053 ZNF330Q9Y3S2 320 aaPredicted RBP9.77□□□□□ -0.85
HMGCR-211ENST00000512053 HOXB1P14653 301 aaPredicted RBP9.76□□□□□ -0.85
HMGCR-211ENST00000512053 ERFEQ4G0M1 354 aa9.76□□□□□ -0.85
HMGCR-211ENST00000512053 FBXO3Q9UK99 471 aa9.76□□□□□ -0.85
HMGCR-211ENST00000512053 KIAA1551Q9HCM1 1747 aa9.76□□□□□ -0.85
HMGCR-211ENST00000512053 C21orf2O43822 256 aa9.75□□□□□ -0.85
HMGCR-211ENST00000512053 DIAPH1O60610 1272 aaKnown RBP9.75□□□□□ -0.85
HMGCR-211ENST00000512053 HSPA1AP0DMV8 641 aaKnown RBP9.75□□□□□ -0.85
HMGCR-211ENST00000512053 HSPA1BP0DMV9 641 aaKnown RBP9.75□□□□□ -0.85
HMGCR-211ENST00000512053 PRELPP51888 382 aa9.75□□□□□ -0.85
HMGCR-211ENST00000512053 TEFQ10587 303 aa9.75□□□□□ -0.85
HMGCR-211ENST00000512053 BRIP1Q9BX63 1249 aa9.75□□□□□ -0.85
HMGCR-211ENST00000512053 COL5A3P25940 1745 aaPredicted RBP9.74□□□□□ -0.85
HMGCR-211ENST00000512053 WDR90Q96KV7 1748 aa9.74□□□□□ -0.85
HMGCR-211ENST00000512053 PDAP1Q13442 181 aaKnown RBP9.74□□□□□ -0.85
HMGCR-211ENST00000512053 MTHFSDQ2M296 383 aaKnown RBP9.74□□□□□ -0.85
HMGCR-211ENST00000512053 SOGA3Q5TF21 947 aa9.74□□□□□ -0.85
HMGCR-211ENST00000512053 CNKSR1Q969H4 720 aa9.74□□□□□ -0.85
HMGCR-211ENST00000512053 SETDB2Q96T68 719 aa9.74□□□□□ -0.85
HMGCR-211ENST00000512053 VASPP50552 380 aaPredicted RBP9.73□□□□□ -0.85
HMGCR-211ENST00000512053 ST5P78524 1137 aa9.73□□□□□ -0.85
HMGCR-211ENST00000512053 TBC1D9BQ66K14 1250 aa9.73□□□□□ -0.85
HMGCR-211ENST00000512053 TAOK3Q9H2K8 898 aa9.73□□□□□ -0.85
HMGCR-211ENST00000512053 BCL2L12Q9HB09 334 aa9.73□□□□□ -0.85
HMGCR-211ENST00000512053 TBC1D2BQ9UPU7 963 aa9.73□□□□□ -0.85
HMGCR-211ENST00000512053 BOLA1Q9Y3E2 137 aa9.73□□□□□ -0.85
HMGCR-211ENST00000512053 IQCA1LA6NCM1 817 aa9.72□□□□□ -0.85
HMGCR-211ENST00000512053 GNAT3A8MTJ3 354 aa9.72□□□□□ -0.85
HMGCR-211ENST00000512053 NFKBIEO00221 500 aa9.72□□□□□ -0.85
HMGCR-211ENST00000512053 U2SURPO15042 1029 aaKnown RBP9.72□□□□□ -0.85
HMGCR-211ENST00000512053 EIF5P55010 431 aaKnown RBP9.72□□□□□ -0.85
HMGCR-211ENST00000512053 ZNF790Q6PG37 636 aa9.72□□□□□ -0.85
HMGCR-211ENST00000512053 CNBD1Q8NA66 436 aa9.72□□□□□ -0.85
HMGCR-211ENST00000512053 GAS2L2Q8NHY3 880 aa9.72□□□□□ -0.85
HMGCR-211ENST00000512053 CARMIL3Q8ND23 1372 aa9.72□□□□□ -0.85
HMGCR-211ENST00000512053 TNRC6CQ9HCJ0 1690 aaKnown RBP9.71□□□□□ -0.85
HMGCR-211ENST00000512053 ARFGEF1Q9Y6D6 1849 aa9.71□□□□□ -0.85
HMGCR-211ENST00000512053 IL6STP40189 918 aaPredicted RBP9.71□□□□□ -0.86
HMGCR-211ENST00000512053 CC2D1BQ5T0F9 858 aaKnown RBP9.71□□□□□ -0.86
HMGCR-211ENST00000512053 PRR5LQ6MZQ0 368 aa9.71□□□□□ -0.86
HMGCR-211ENST00000512053 CCDC24Q8N4L8 307 aa9.71□□□□□ -0.86
HMGCR-211ENST00000512053 AIDAQ96BJ3 306 aa9.71□□□□□ -0.86
HMGCR-211ENST00000512053 MASTLQ96GX5 879 aa9.71□□□□□ -0.86
HMGCR-211ENST00000512053 ZNF496Q96IT1 587 aaPredicted RBP9.71□□□□□ -0.86
HMGCR-211ENST00000512053 FMNL2Q96PY5 1086 aa9.71□□□□□ -0.86
HMGCR-211ENST00000512053 DDNO94850 711 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms