RNA–Protein interactions for RNA: ENST00000511697.1

CALCOCO2-219, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-219ENST00000511697 RBM46Q8TBY0 533 aaKnown RBP13.24□□□□□ -0.29
CALCOCO2-219ENST00000511697 TEX13AQ9BXU3 409 aaPredicted RBP13.24□□□□□ -0.29
CALCOCO2-219ENST00000511697 U2AF1L5P0DN76 240 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO2-219ENST00000511697 IL6STP40189 918 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO2-219ENST00000511697 PRELPP51888 382 aa13.23□□□□□ -0.29
CALCOCO2-219ENST00000511697 HTRA3P83110 453 aa13.23□□□□□ -0.29
CALCOCO2-219ENST00000511697 U2AF1Q01081 240 aaKnown RBP eCLIP13.23□□□□□ -0.29
CALCOCO2-219ENST00000511697 IFFO2Q5TF58 517 aa13.23□□□□□ -0.29
CALCOCO2-219ENST00000511697 NPM2Q86SE8 214 aaKnown RBP13.23□□□□□ -0.29
CALCOCO2-219ENST00000511697 ZNF622Q969S3 477 aaKnown RBP eCLIP13.23□□□□□ -0.291e-16■□□□□ 10.1
CALCOCO2-219ENST00000511697 PCNTO95613 3336 aa13.22□□□□□ -0.29
CALCOCO2-219ENST00000511697 PRAMEF22A3QJZ6 481 aa13.22□□□□□ -0.29
CALCOCO2-219ENST00000511697 NPHP1O15259 732 aa13.22□□□□□ -0.29
CALCOCO2-219ENST00000511697 LMNB1P20700 586 aa13.22□□□□□ -0.29
CALCOCO2-219ENST00000511697 PPP2R1AP30153 589 aa13.22□□□□□ -0.29
CALCOCO2-219ENST00000511697 PRR5LQ6MZQ0 368 aa13.22□□□□□ -0.29
CALCOCO2-219ENST00000511697 MCM10Q7L590 875 aa13.22□□□□□ -0.29
CALCOCO2-219ENST00000511697 NUDCQ9Y266 331 aa13.22□□□□□ -0.29
CALCOCO2-219ENST00000511697 FER1L6Q2WGJ9 1857 aa13.21□□□□□ -0.29
CALCOCO2-219ENST00000511697 PDE6BP35913 854 aa13.21□□□□□ -0.29
CALCOCO2-219ENST00000511697 RTF1Q92541 710 aaKnown RBP13.21□□□□□ -0.29
CALCOCO2-219ENST00000511697 USP16Q9Y5T5 823 aa13.21□□□□□ -0.29
CALCOCO2-219ENST00000511697 DICER1Q9UPY3 1922 aaKnown RBP13.21□□□□□ -0.3
CALCOCO2-219ENST00000511697 ZC3H4Q9UPT8 1303 aaKnown RBP13.2□□□□□ -0.3
CALCOCO2-219ENST00000511697 NFKBIEO00221 500 aa13.2□□□□□ -0.3
CALCOCO2-219ENST00000511697 C21orf2O43822 256 aa13.2□□□□□ -0.3
CALCOCO2-219ENST00000511697 CAMTA2O94983 1202 aa13.2□□□□□ -0.3
CALCOCO2-219ENST00000511697 FSTL1Q12841 308 aa13.2□□□□□ -0.3
CALCOCO2-219ENST00000511697 DCTN1Q14203 1278 aa13.2□□□□□ -0.3
CALCOCO2-219ENST00000511697 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
CALCOCO2-219ENST00000511697 DNAJC5GQ8N7S2 189 aa13.2□□□□□ -0.3
CALCOCO2-219ENST00000511697 CNBD1Q8NA66 436 aa13.2□□□□□ -0.3
CALCOCO2-219ENST00000511697 SETDB2Q96T68 719 aa13.2□□□□□ -0.3
CALCOCO2-219ENST00000511697 BRIP1Q9BX63 1249 aa13.2□□□□□ -0.3
CALCOCO2-219ENST00000511697 SLX4Q8IY92 1834 aa13.2□□□□□ -0.3
CALCOCO2-219ENST00000511697 DLG5Q8TDM6 1919 aa13.19□□□□□ -0.3
CALCOCO2-219ENST00000511697 ARFGEF2Q9Y6D5 1785 aa13.19□□□□□ -0.3
CALCOCO2-219ENST00000511697 GLTPD2A6NH11 291 aa13.18□□□□□ -0.3
CALCOCO2-219ENST00000511697 ST5P78524 1137 aa13.18□□□□□ -0.3
CALCOCO2-219ENST00000511697 SMC1BQ8NDV3 1235 aa13.18□□□□□ -0.3
CALCOCO2-219ENST00000511697 LAMB4A4D0S4 1761 aa13.17□□□□□ -0.3
CALCOCO2-219ENST00000511697 SNRPA1P09661 255 aaKnown RBP13.17□□□□□ -0.3
CALCOCO2-219ENST00000511697 PDZRN3Q9UPQ7 1066 aa13.17□□□□□ -0.3
CALCOCO2-219ENST00000511697 VEGFAP15692 232 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO2-219ENST00000511697 ERFEQ4G0M1 354 aa13.16□□□□□ -0.3
CALCOCO2-219ENST00000511697 PRPF40BQ6NWY9 871 aaKnown RBP13.16□□□□□ -0.3
CALCOCO2-219ENST00000511697 NBPF5PQ86XG9 351 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO2-219ENST00000511697 MIS18AQ9NYP9 233 aa13.16□□□□□ -0.3
CALCOCO2-219ENST00000511697 KDM3BQ7LBC6 1761 aa13.15□□□□□ -0.3
CALCOCO2-219ENST00000511697 FAM177BA6PVY3 158 aa13.15□□□□□ -0.3
CALCOCO2-219ENST00000511697 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
CALCOCO2-219ENST00000511697 SRGNP10124 158 aa13.15□□□□□ -0.3
CALCOCO2-219ENST00000511697 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
CALCOCO2-219ENST00000511697 NBPF15Q8N660 670 aa13.15□□□□□ -0.3
CALCOCO2-219ENST00000511697 CNKSR1Q969H4 720 aa13.15□□□□□ -0.3
CALCOCO2-219ENST00000511697 KLRG1Q96E93 195 aa13.15□□□□□ -0.3
CALCOCO2-219ENST00000511697 TAOK3Q9H2K8 898 aa13.15□□□□□ -0.3
CALCOCO2-219ENST00000511697 ZNF652Q9Y2D9 606 aa13.15□□□□□ -0.3
CALCOCO2-219ENST00000511697 STYK1Q6J9G0 422 aa13.14□□□□□ -0.31
CALCOCO2-219ENST00000511697 DPY19L2Q6NUT2 758 aa13.14□□□□□ -0.31
CALCOCO2-219ENST00000511697 MASTLQ96GX5 879 aa13.14□□□□□ -0.31
CALCOCO2-219ENST00000511697 POTECB2RU33 542 aa13.13□□□□□ -0.31
CALCOCO2-219ENST00000511697 HTATSF1O43719 755 aaKnown RBP13.13□□□□□ -0.31
CALCOCO2-219ENST00000511697 TAF7Q15545 349 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-219ENST00000511697 CLEC4GQ6UXB4 293 aa13.13□□□□□ -0.31
CALCOCO2-219ENST00000511697 NIP7Q9Y221 180 aaKnown RBP eCLIP13.13□□□□□ -0.31
CALCOCO2-219ENST00000511697 NUP98P52948 1817 aa13.12□□□□□ -0.31
CALCOCO2-219ENST00000511697 NEFMP07197 916 aa13.12□□□□□ -0.31
CALCOCO2-219ENST00000511697 NGEFQ8N5V2 710 aa13.12□□□□□ -0.31
CALCOCO2-219ENST00000511697 LTBP3Q9NS15 1303 aa13.12□□□□□ -0.31
CALCOCO2-219ENST00000511697 DDNO94850 711 aaPredicted RBP13.11□□□□□ -0.31
CALCOCO2-219ENST00000511697 HLFQ16534 295 aa13.11□□□□□ -0.31
CALCOCO2-219ENST00000511697 SOGA3Q5TF21 947 aa13.11□□□□□ -0.31
CALCOCO2-219ENST00000511697 TPTE2Q6XPS3 522 aa13.11□□□□□ -0.31
CALCOCO2-219ENST00000511697 THUMPD2Q9BTF0 503 aaKnown RBP13.11□□□□□ -0.31
CALCOCO2-219ENST00000511697 NPR1P16066 1061 aa13.1□□□□□ -0.31
CALCOCO2-219ENST00000511697 OLFM4Q6UX06 510 aa13.1□□□□□ -0.31
CALCOCO2-219ENST00000511697 JMYQ8N9B5 988 aa13.1□□□□□ -0.31
CALCOCO2-219ENST00000511697 GTF2E1P29083 439 aaPredicted RBP13.09□□□□□ -0.31
CALCOCO2-219ENST00000511697 CCDC93Q567U6 631 aa13.09□□□□□ -0.31
CALCOCO2-219ENST00000511697 POTEIP0CG38 1075 aa13.08□□□□□ -0.32
CALCOCO2-219ENST00000511697 POTEJP0CG39 1038 aa13.08□□□□□ -0.32
CALCOCO2-219ENST00000511697 MYL6BP14649 208 aa13.08□□□□□ -0.32
CALCOCO2-219ENST00000511697 PNISRQ8TF01 805 aaKnown RBP13.08□□□□□ -0.32
CALCOCO2-219ENST00000511697 C7orf43Q8WVR3 580 aa13.08□□□□□ -0.32
CALCOCO2-219ENST00000511697 PLEKHF1Q96S99 279 aa13.08□□□□□ -0.32
CALCOCO2-219ENST00000511697 ZNF277Q9NRM2 450 aaPredicted RBP13.08□□□□□ -0.32
CALCOCO2-219ENST00000511697 RRP7AQ9Y3A4 280 aaKnown RBP13.08□□□□□ -0.32
CALCOCO2-219ENST00000511697 MAPK8IP3Q9UPT6 1336 aa13.08□□□□□ -0.32
CALCOCO2-219ENST00000511697 ABCC12Q96J65 1359 aa13.07□□□□□ -0.32
CALCOCO2-219ENST00000511697 SCN4AP35499 1836 aa13.07□□□□□ -0.32
CALCOCO2-219ENST00000511697 KLRG2A4D1S0 409 aaPredicted RBP13.07□□□□□ -0.32
CALCOCO2-219ENST00000511697 RGL2O15211 777 aa13.07□□□□□ -0.32
CALCOCO2-219ENST00000511697 EIF4A1P60842 406 aaKnown RBP13.07□□□□□ -0.32
CALCOCO2-219ENST00000511697 FKBP4Q02790 459 aaKnown RBP eCLIP13.07□□□□□ -0.32
CALCOCO2-219ENST00000511697 NFE2L2Q16236 605 aa13.07□□□□□ -0.32
CALCOCO2-219ENST00000511697 KIF6Q6ZMV9 814 aa13.07□□□□□ -0.32
CALCOCO2-219ENST00000511697 NUTM1Q86Y26 1132 aa13.07□□□□□ -0.32
CALCOCO2-219ENST00000511697 GPTP24298 496 aa13.06□□□□□ -0.32
CALCOCO2-219ENST00000511697 COL13A1Q5TAT6 717 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms